RNA–Protein interactions for RNA: ENST00000396819.7

LTBP4-205, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP4, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-205ENST00000396819 IER5Q5VY09 327 aa18.27■□□□□ 0.52
LTBP4-205ENST00000396819 THEM5Q8N1Q8 247 aa18.27■□□□□ 0.52
LTBP4-205ENST00000396819 REEP2Q9BRK0 252 aa18.27■□□□□ 0.52
LTBP4-205ENST00000396819 MON2Q7Z3U7 1717 aa18.27■□□□□ 0.52
LTBP4-205ENST00000396819 SERPING1P05155 500 aa18.27■□□□□ 0.52
LTBP4-205ENST00000396819 IRX5P78411 483 aaPredicted RBP18.27■□□□□ 0.52
LTBP4-205ENST00000396819 KCNK9Q9NPC2 374 aa18.27■□□□□ 0.52
LTBP4-205ENST00000396819 LGALS16A8MUM7 142 aa18.27■□□□□ 0.51
LTBP4-205ENST00000396819 TMEM62Q0P6H9 643 aa18.27■□□□□ 0.51
LTBP4-205ENST00000396819 EMC2Q15006 297 aa18.27■□□□□ 0.51
LTBP4-205ENST00000396819 METTL16Q86W50 562 aaKnown RBP18.27■□□□□ 0.51
LTBP4-205ENST00000396819 GPD1LQ8N335 351 aa18.27■□□□□ 0.51
LTBP4-205ENST00000396819 KRT39Q6A163 491 aa18.26■□□□□ 0.51
LTBP4-205ENST00000396819 PHLDB2Q86SQ0 1253 aa18.26■□□□□ 0.51
LTBP4-205ENST00000396819 RNF180Q86T96 592 aa18.26■□□□□ 0.51
LTBP4-205ENST00000396819 CEP57Q86XR8 500 aa18.26■□□□□ 0.51
LTBP4-205ENST00000396819 RIC1Q4ADV7 1423 aa18.26■□□□□ 0.51
LTBP4-205ENST00000396819 NDC80O14777 642 aa18.26■□□□□ 0.51
LTBP4-205ENST00000396819 ACTR2P61160 394 aa18.26■□□□□ 0.51
LTBP4-205ENST00000396819 RNF139Q8WU17 664 aa18.26■□□□□ 0.51
LTBP4-205ENST00000396819 P2RX7Q99572 595 aaKnown RBP18.26■□□□□ 0.51
LTBP4-205ENST00000396819 SLC38A10Q9HBR0 1119 aa18.26■□□□□ 0.51
LTBP4-205ENST00000396819 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.26■□□□□ 0.51
LTBP4-205ENST00000396819 TYW5A2RUC4 315 aaKnown RBP18.26■□□□□ 0.51
LTBP4-205ENST00000396819 CIITAP33076 1130 aa18.26■□□□□ 0.51
LTBP4-205ENST00000396819 TCF7P36402 384 aaPredicted RBP18.26■□□□□ 0.51
LTBP4-205ENST00000396819 CPT1AP50416 773 aa18.26■□□□□ 0.51
LTBP4-205ENST00000396819 CYP27A1Q02318 531 aa18.26■□□□□ 0.51
LTBP4-205ENST00000396819 ALKBH5Q6P6C2 394 aaKnown RBP18.26■□□□□ 0.51
LTBP4-205ENST00000396819 PPANQ9NQ55 473 aaKnown RBP18.26■□□□□ 0.51
LTBP4-205ENST00000396819 TRIM49P0CI25 452 aa18.26■□□□□ 0.51
LTBP4-205ENST00000396819 TRIM49CP0CI26 452 aa18.26■□□□□ 0.51
LTBP4-205ENST00000396819 DUOXA2Q1HG44 320 aa18.26■□□□□ 0.51
LTBP4-205ENST00000396819 LRRC71Q8N4P6 559 aa18.26■□□□□ 0.51
LTBP4-205ENST00000396819 KIF12Q96FN5 646 aa18.26■□□□□ 0.51
LTBP4-205ENST00000396819 KCND2Q9NZV8 630 aa18.26■□□□□ 0.51
LTBP4-205ENST00000396819 POLIQ9UNA4 740 aa18.26■□□□□ 0.51
LTBP4-205ENST00000396819 XRN1Q8IZH2 1706 aaKnown RBP18.25■□□□□ 0.51
LTBP4-205ENST00000396819 PTPRAP18433 802 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 FXR2P51116 673 aaKnown RBP eCLIP18.25■□□□□ 0.511e-7■■■■□ 22.8
LTBP4-205ENST00000396819 VGLL4Q14135 290 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 TMEM270Q6UE05 265 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 NLGN2Q8NFZ4 835 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 PDXKO00764 312 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 RFC5P40937 340 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 PPP2R5EQ16537 467 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 ERICH1Q86X53 443 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 CCDC170Q8IYT3 715 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 SAMD3Q8N6K7 520 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 RPGRIP1Q96KN7 1286 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 ACAP3Q96P50 834 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 SLC12A6Q9UHW9 1150 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 ZNF148Q9UQR1 794 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 MYMKA6NI61 221 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 VWA5AO00534 786 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 RIOK3O14730 519 aaKnown RBP18.25■□□□□ 0.51
LTBP4-205ENST00000396819 SLC37A4O43826 429 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 ITKQ08881 620 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 ZNF746Q6NUN9 644 aaPredicted RBP18.25■□□□□ 0.51
LTBP4-205ENST00000396819 NHEJ1Q9H9Q4 299 aaPredicted RBP18.25■□□□□ 0.51
LTBP4-205ENST00000396819 SPTLC3Q9NUV7 552 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 NRXN3Q9Y4C0 1643 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 SREBF1P36956 1147 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 NAA35Q5VZE5 725 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 SYTL5Q8TDW5 730 aaPredicted RBP18.25■□□□□ 0.51
LTBP4-205ENST00000396819 RAB17Q9H0T7 212 aa18.25■□□□□ 0.51
LTBP4-205ENST00000396819 EFCAB12Q6NXP0 572 aa18.24■□□□□ 0.51
LTBP4-205ENST00000396819 ARFGAP2Q8N6H7 521 aa18.24■□□□□ 0.51
LTBP4-205ENST00000396819 RDM1Q8NG50 284 aa18.24■□□□□ 0.51
LTBP4-205ENST00000396819 TRPM4Q8TD43 1214 aa18.24■□□□□ 0.51
LTBP4-205ENST00000396819 ASCC2Q9H1I8 757 aaPredicted RBP18.24■□□□□ 0.51
LTBP4-205ENST00000396819 SLITRK6Q9H5Y7 841 aa18.24■□□□□ 0.51
LTBP4-205ENST00000396819 BAZ2BQ9UIF8 2168 aaKnown RBP18.24■□□□□ 0.51
LTBP4-205ENST00000396819 ASAP2O43150 1006 aa18.24■□□□□ 0.51
LTBP4-205ENST00000396819 ONECUT3O60422 494 aaPredicted RBP18.24■□□□□ 0.51
LTBP4-205ENST00000396819 ELMSAN1Q6PJG2 1045 aa18.24■□□□□ 0.51
LTBP4-205ENST00000396819 FBXO16Q8IX29 292 aaPredicted RBP18.24■□□□□ 0.51
LTBP4-205ENST00000396819 PDCD2LQ9BRP1 358 aa18.24■□□□□ 0.51
LTBP4-205ENST00000396819 DNAJC21Q5F1R6 531 aaKnown RBP18.24■□□□□ 0.51
LTBP4-205ENST00000396819 CATSPER3Q86XQ3 398 aa18.24■□□□□ 0.51
LTBP4-205ENST00000396819 SCN4BQ8IWT1 228 aa18.24■□□□□ 0.51
LTBP4-205ENST00000396819 C7orf25Q9BPX7 421 aa18.24■□□□□ 0.51
LTBP4-205ENST00000396819 CYP2C8P10632 490 aa18.23■□□□□ 0.51
LTBP4-205ENST00000396819 PLS3P13797 630 aa18.23■□□□□ 0.51
LTBP4-205ENST00000396819 TSPY1Q01534 308 aa18.23■□□□□ 0.51
LTBP4-205ENST00000396819 PAK2Q13177 524 aa18.23■□□□□ 0.51
LTBP4-205ENST00000396819 RNF187Q5TA31 235 aaPredicted RBP18.23■□□□□ 0.51
LTBP4-205ENST00000396819 FAM217BQ9NTX9 383 aaPredicted RBP18.23■□□□□ 0.51
LTBP4-205ENST00000396819 ANKEF1Q9NU02 776 aa18.23■□□□□ 0.51
LTBP4-205ENST00000396819 SEPT10Q9P0V9 454 aa18.23■□□□□ 0.51
LTBP4-205ENST00000396819 COL14A1Q05707 1796 aaKnown RBP18.23■□□□□ 0.51
LTBP4-205ENST00000396819 ROBO1Q9Y6N7 1651 aa18.23■□□□□ 0.51
LTBP4-205ENST00000396819 H7C0C1 242 aa18.23■□□□□ 0.51
LTBP4-205ENST00000396819 ARP10275 920 aa18.23■□□□□ 0.51
LTBP4-205ENST00000396819 ATP5OP48047 213 aa18.23■□□□□ 0.51
LTBP4-205ENST00000396819 RASGRP2Q7LDG7 609 aa18.23■□□□□ 0.51
LTBP4-205ENST00000396819 KRT222Q8N1A0 295 aa18.23■□□□□ 0.51
LTBP4-205ENST00000396819 TMEM35BQ8NCS4 154 aa18.23■□□□□ 0.51
LTBP4-205ENST00000396819 BCL9LQ86UU0 1499 aa18.23■□□□□ 0.51
LTBP4-205ENST00000396819 RRN3P2A6NIE6 340 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms