RNA–Protein interactions for RNA: ENST00000396444.7

USP8-202, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 19,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-202ENST00000396444 CAVIN3Q969G5 261 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 KLC2Q9H0B6 622 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 KRT7P08729 469 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 AP1B1Q10567 949 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 NME9Q86XW9 330 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 RPUSD2Q8IZ73 545 aaKnown RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 TADA3O75528 432 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 FAM47CQ5HY64 1035 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 ZNF654Q8IZM8 581 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 RASSF5Q8WWW0 418 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 LARP4BQ92615 738 aaKnown RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 CCDC134Q9H6E4 229 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 ASXL3Q9C0F0 2248 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 TRAF5O00463 557 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 KRIT1O00522 736 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 MAP3K7O43318 606 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 DEAF1O75398 565 aaPredicted RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 POLR3DP05423 398 aaPredicted RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 VIL1P09327 827 aaKnown RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 CBX1P83916 185 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 RFX4Q33E94 735 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 PTF1AQ7RTS3 328 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 PHKBQ93100 1093 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 NPTXRO95502 500 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 ERICH1Q86X53 443 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 CTAGE3PQ8IX95 158 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 MYOCDQ8IZQ8 938 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 PA2G4Q9UQ80 394 aaKnown RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 IRS2Q9Y4H2 1338 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 PYGMP11217 842 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 KRT4P19013 534 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 LMOD1P29536 600 aaPredicted RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 TMEM132AQ24JP5 1023 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 IKBIPQ70UQ0 350 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 ANKRD13AQ8IZ07 590 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 GOLM1Q8NBJ4 401 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 FNBP1Q96RU3 617 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 CDY2AQ9Y6F7 541 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 CDY1Q9Y6F8 540 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 VPS4BO75351 444 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 SLC2A3P11169 496 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 HTR7P34969 479 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 KIAA1755Q5JYT7 1200 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 FOXP4Q8IVH2 680 aaPredicted RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 ZNF557Q8N988 423 aaPredicted RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 H0YJX3 145 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 MDM2Q00987 491 aaPredicted RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 OSBPL6Q9BZF3 934 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 SUCLA2Q9P2R7 463 aaPredicted RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 MFSD5Q6N075 450 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 SNX29Q8TEQ0 813 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.28□□□□□ -1.56
USP8-202ENST00000396444 INO80BQ9C086 356 aaPredicted RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 CEP78Q5JTW2 689 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 PI16Q6UXB8 463 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 CACYBPQ9HB71 228 aaKnown RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 RRP15Q9Y3B9 282 aaKnown RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 NUB1Q9Y5A7 615 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 ACTRT1Q8TDG2 376 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 ZNF212Q9UDV6 495 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 LPAR1Q92633 364 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 SSU72Q9NP77 194 aaKnown RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 WHRNQ9P202 907 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 PRIM2P49643 509 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 OTUD4Q01804 1114 aaKnown RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 ACMSDQ8TDX5 336 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 PYROXD1Q8WU10 500 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 KRT12Q99456 494 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 TLR3O15455 904 aaKnown RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 DNAJA2O60884 412 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 CC2D1AQ6P1N0 951 aaPredicted RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 RSPH3Q86UC2 560 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 ZSCAN29Q8IWY8 852 aaPredicted RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 AOPEPQ8N6M6 819 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 DDX23Q9BUQ8 820 aaKnown RBP5.28□□□□□ -1.56
USP8-202ENST00000396444 TBC1D22BQ9NU19 505 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 AP1M2Q9Y6Q5 423 aa5.28□□□□□ -1.56
USP8-202ENST00000396444 PSMD3O43242 534 aa5.27□□□□□ -1.57
USP8-202ENST00000396444 PSTPIP1O43586 416 aa5.27□□□□□ -1.57
USP8-202ENST00000396444 ITGB3BPQ13352 177 aaPredicted RBP5.27□□□□□ -1.57
USP8-202ENST00000396444 KLHL29Q96CT2 875 aa5.27□□□□□ -1.57
USP8-202ENST00000396444 CATSPER2Q96P56 530 aa5.27□□□□□ -1.57
USP8-202ENST00000396444 TRAIPQ9BWF2 469 aa5.27□□□□□ -1.57
USP8-202ENST00000396444 MTO1Q9Y2Z2 717 aaKnown RBP5.27□□□□□ -1.57
USP8-202ENST00000396444 GMEB1Q9Y692 573 aa5.27□□□□□ -1.57
USP8-202ENST00000396444 POLR2DO15514 142 aaKnown RBP5.27□□□□□ -1.57
USP8-202ENST00000396444 TBC1D12O60347 775 aa5.27□□□□□ -1.57
USP8-202ENST00000396444 KRT3P12035 628 aa5.27□□□□□ -1.57
USP8-202ENST00000396444 MARK3P27448 753 aa5.27□□□□□ -1.57
USP8-202ENST00000396444 PPP4R4Q6NUP7 873 aa5.27□□□□□ -1.57
USP8-202ENST00000396444 NT5DC4Q86YG4 428 aa5.27□□□□□ -1.57
USP8-202ENST00000396444 PABPC3Q9H361 631 aaKnown RBP5.27□□□□□ -1.57
USP8-202ENST00000396444 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.27□□□□□ -1.57
USP8-202ENST00000396444 PPP1R37O75864 691 aa5.27□□□□□ -1.57
USP8-202ENST00000396444 ATP2B4P23634 1241 aa5.27□□□□□ -1.57
USP8-202ENST00000396444 PDIA3P30101 505 aaKnown RBP5.27□□□□□ -1.57
USP8-202ENST00000396444 COL23A1Q86Y22 540 aaPredicted RBP5.27□□□□□ -1.57
USP8-202ENST00000396444 DIS3L2Q8IYB7 885 aaKnown RBP5.27□□□□□ -1.57
USP8-202ENST00000396444 C15orf40Q8WUR7 153 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms