RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 SPC25Q9HBM1 224 aa16.71■□□□□ 0.27
PTPN20-206ENST00000395722 XPNPEP3Q9NQH7 507 aa16.71■□□□□ 0.27
PTPN20-206ENST00000395722 C22orf31O95567 290 aa16.7■□□□□ 0.26
PTPN20-206ENST00000395722 C6orf222P0C671 652 aaPredicted RBP16.7■□□□□ 0.26
PTPN20-206ENST00000395722 NCKAP1LP55160 1127 aa16.7■□□□□ 0.26
PTPN20-206ENST00000395722 SOX10P56693 466 aa16.7■□□□□ 0.26
PTPN20-206ENST00000395722 CCSAPQ6IQ19 270 aaPredicted RBP16.7■□□□□ 0.26
PTPN20-206ENST00000395722 FAM178BQ8IXR5 827 aa16.7■□□□□ 0.26
PTPN20-206ENST00000395722 LINC01465Q8N7H1 131 aa16.7■□□□□ 0.26
PTPN20-206ENST00000395722 ZNF507Q8TCN5 953 aa16.7■□□□□ 0.26
PTPN20-206ENST00000395722 BSNDQ8WZ55 320 aa16.7■□□□□ 0.26
PTPN20-206ENST00000395722 P2RX5Q93086 422 aa16.7■□□□□ 0.26
PTPN20-206ENST00000395722 JPH2Q9BR39 696 aaPredicted RBP16.7■□□□□ 0.26
PTPN20-206ENST00000395722 POLR3FQ9H1D9 316 aaPredicted RBP16.7■□□□□ 0.26
PTPN20-206ENST00000395722 UBE4BO95155 1302 aa16.7■□□□□ 0.26
PTPN20-206ENST00000395722 BECN2A8MW95 431 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 MSCO60682 206 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 PGK1P00558 417 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 MYL3P08590 195 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 MYBP10242 640 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 NMT1P30419 496 aaKnown RBP16.69■□□□□ 0.26
PTPN20-206ENST00000395722 HOXD13P35453 343 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 PSEN2P49810 448 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 MKRN4PQ13434 485 aaPredicted RBP16.69■□□□□ 0.26
PTPN20-206ENST00000395722 MFSD10Q14728 455 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 ZCWPW2Q504Y3 356 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 SPATA1Q5VX52 437 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 TTI2Q6NXR4 508 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 SLC17A8Q8NDX2 589 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 TRAPPC12Q8WVT3 735 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 SEMA6BQ9H3T3 888 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 SCN10AQ9Y5Y9 1956 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 MAGEB2O15479 319 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 KIF20AO95235 890 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 HSPA8P11142 646 aaKnown RBP16.69■□□□□ 0.26
PTPN20-206ENST00000395722 PMS1P54277 932 aaKnown RBP16.69■□□□□ 0.26
PTPN20-206ENST00000395722 STX17P56962 302 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 PPFIA1Q13136 1202 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 ALCAMQ13740 583 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 KIAA0753Q2KHM9 967 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 GNASQ5JWF2 1037 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 TMEM143Q96AN5 459 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 KATNAL1Q9BW62 490 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 KCTD10Q9H3F6 313 aa16.69■□□□□ 0.26
PTPN20-206ENST00000395722 HMX1Q9NP08 348 aaPredicted RBP16.69■□□□□ 0.26
PTPN20-206ENST00000395722 FRMPD3Q5JV73 1810 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 RRN3P2A6NIE6 340 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 GCNT3O95395 438 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 HOXC8P31273 242 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 NPTX2P47972 431 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 PEX3P56589 373 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 GRIK4Q16099 956 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 MARCH8Q5T0T0 291 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 IER5Q5VY09 327 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 LHX8Q68G74 356 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 ASAP3Q8TDY4 903 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 TCP11Q8WWU5 503 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 MTG1Q9BT17 334 aaPredicted RBP16.68■□□□□ 0.26
PTPN20-206ENST00000395722 KCNG1Q9UIX4 513 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 BICDL2A1A5D9 508 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 GOLGA6L19H0YKK7 550 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 ZEB2O60315 1214 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 SMIM10L2AP0DMW4 78 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 SMIM10L2BP0DMW5 78 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 ZNF18P17022 549 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 GLRA2P23416 452 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 GTF2BQ00403 316 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 DMP1Q13316 513 aaPredicted RBP16.68■□□□□ 0.26
PTPN20-206ENST00000395722 DRP2Q13474 957 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 L1TD1Q5T7N2 865 aaKnown RBP16.68■□□□□ 0.26
PTPN20-206ENST00000395722 STXBP4Q6ZWJ1 553 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 TMEM161BQ8NDZ6 487 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 DUSP9Q99956 384 aaKnown RBP16.68■□□□□ 0.26
PTPN20-206ENST00000395722 NFE2L3Q9Y4A8 694 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 PCDHB13Q9Y5F0 798 aa16.68■□□□□ 0.26
PTPN20-206ENST00000395722 NRCAMQ92823 1304 aa16.67■□□□□ 0.26
PTPN20-206ENST00000395722 TRIM49BA6NDI0 452 aa16.67■□□□□ 0.26
PTPN20-206ENST00000395722 PRPF6O94906 941 aaKnown RBP16.67■□□□□ 0.26
PTPN20-206ENST00000395722 ADAM17P78536 824 aa16.67■□□□□ 0.26
PTPN20-206ENST00000395722 LRRC63Q05C16 580 aa16.67■□□□□ 0.26
PTPN20-206ENST00000395722 ZC2HC1CQ53FD0 456 aaPredicted RBP16.67■□□□□ 0.26
PTPN20-206ENST00000395722 ANKRD40Q6AI12 368 aa16.67■□□□□ 0.26
PTPN20-206ENST00000395722 MTHFD1LQ6UB35 978 aa16.67■□□□□ 0.26
PTPN20-206ENST00000395722 HAUS6Q7Z4H7 955 aa16.67■□□□□ 0.26
PTPN20-206ENST00000395722 HVCN1Q96D96 273 aa16.67■□□□□ 0.26
PTPN20-206ENST00000395722 IFT74Q96LB3 600 aa16.67■□□□□ 0.26
PTPN20-206ENST00000395722 FANCLQ9NW38 375 aa16.67■□□□□ 0.26
PTPN20-206ENST00000395722 ARHGAP28Q9P2N2 729 aa16.67■□□□□ 0.26
PTPN20-206ENST00000395722 ZMYM2Q9UBW7 1377 aa16.67■□□□□ 0.26
PTPN20-206ENST00000395722 PCNTO95613 3336 aa16.67■□□□□ 0.26
PTPN20-206ENST00000395722 MBLAC1A4D2B0 266 aaPredicted RBP16.66■□□□□ 0.26
PTPN20-206ENST00000395722 K7ENM7 598 aa16.66■□□□□ 0.26
PTPN20-206ENST00000395722 SCP2P22307 547 aa16.66■□□□□ 0.26
PTPN20-206ENST00000395722 KLRC1P26715 233 aa16.66■□□□□ 0.26
PTPN20-206ENST00000395722 NAMPTP43490 491 aa16.66■□□□□ 0.26
PTPN20-206ENST00000395722 SMTNP53814 917 aa16.66■□□□□ 0.26
PTPN20-206ENST00000395722 PPP2R5AQ15172 486 aa16.66■□□□□ 0.26
PTPN20-206ENST00000395722 KNOP1Q1ED39 458 aaKnown RBP16.66■□□□□ 0.26
PTPN20-206ENST00000395722 CDKAL1Q5VV42 579 aa16.66■□□□□ 0.26
PTPN20-206ENST00000395722 SH3TC2Q8TF17 1288 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms