RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 MTHFSDQ2M296 383 aaKnown RBP6.94□□□□□ -1.3
AP3S1-202ENST00000395548 SIAH1Q8IUQ4 282 aa6.94□□□□□ -1.3
AP3S1-202ENST00000395548 NGEFQ8N5V2 710 aa6.94□□□□□ -1.3
AP3S1-202ENST00000395548 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.94□□□□□ -1.37e-7■□□□□ 9.1
AP3S1-202ENST00000395548 CD320Q9NPF0 282 aa6.94□□□□□ -1.3
AP3S1-202ENST00000395548 MSRAQ9UJ68 235 aa6.94□□□□□ -1.3
AP3S1-202ENST00000395548 MINPP1Q9UNW1 487 aa6.94□□□□□ -1.3
AP3S1-202ENST00000395548 SMG5Q9UPR3 1016 aaKnown RBP6.94□□□□□ -1.3
AP3S1-202ENST00000395548 LAMB2P55268 1798 aa6.94□□□□□ -1.3
AP3S1-202ENST00000395548 SETXQ7Z333 2677 aaKnown RBP6.94□□□□□ -1.3
AP3S1-202ENST00000395548 MED19A0JLT2 244 aaPredicted RBP6.93□□□□□ -1.3
AP3S1-202ENST00000395548 MEIS1O00470 390 aa6.93□□□□□ -1.3
AP3S1-202ENST00000395548 GSNP06396 782 aa6.93□□□□□ -1.3
AP3S1-202ENST00000395548 RACK1P63244 317 aaKnown RBP6.93□□□□□ -1.3
AP3S1-202ENST00000395548 RAB30Q15771 203 aa6.93□□□□□ -1.3
AP3S1-202ENST00000395548 ST3GAL2Q16842 350 aa6.93□□□□□ -1.3
AP3S1-202ENST00000395548 ANKRD39Q53RE8 183 aa6.93□□□□□ -1.3
AP3S1-202ENST00000395548 LCE1DQ5T752 114 aa6.93□□□□□ -1.3
AP3S1-202ENST00000395548 SPOCD1Q6ZMY3 1216 aa6.93□□□□□ -1.3
AP3S1-202ENST00000395548 SIRT2Q8IXJ6 389 aa6.93□□□□□ -1.3
AP3S1-202ENST00000395548 PRSS33Q8NF86 280 aa6.93□□□□□ -1.3
AP3S1-202ENST00000395548 CRBNQ96SW2 442 aa6.93□□□□□ -1.3
AP3S1-202ENST00000395548 DSCC1Q9BVC3 393 aa6.93□□□□□ -1.3
AP3S1-202ENST00000395548 VEZTQ9HBM0 779 aa6.93□□□□□ -1.3
AP3S1-202ENST00000395548 ATP11BQ9Y2G3 1177 aa6.93□□□□□ -1.3
AP3S1-202ENST00000395548 TPRP12270 2363 aaKnown RBP6.93□□□□□ -1.3
AP3S1-202ENST00000395548 ANKRD36CQ5JPF3 1778 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 TEX51A0A1B0GUA7 166 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 ZNF205O95201 554 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 RECKO95980 971 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 VAV1P15498 845 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 PNLIPP16233 465 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 GUCY2CP25092 1073 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 RPS8P62241 208 aaKnown RBP6.92□□□□□ -1.3
AP3S1-202ENST00000395548 PPATQ06203 517 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 ADGRF1Q5T601 910 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 CWF19L1Q69YN2 538 aaKnown RBP6.92□□□□□ -1.3
AP3S1-202ENST00000395548 GALNT18Q6P9A2 607 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 GIMAP6Q6P9H5 292 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 CCDC174Q6PII3 467 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 ZPBP2Q6X784 338 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 DPH6Q7L8W6 267 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 DGLUCYQ7Z3D6 616 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 C1QL4Q86Z23 238 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 CERS3Q8IU89 383 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 IL17REQ8NFR9 667 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 CELF1Q92879 486 aaKnown RBP6.92□□□□□ -1.3
AP3S1-202ENST00000395548 TESK2Q96S53 571 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 CDADC1Q9BWV3 514 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 SLC28A3Q9HAS3 691 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 PPT2Q9UMR5 302 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 SH3TC1Q8TE82 1336 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 MYBBP1AQ9BQG0 1328 aaKnown RBP6.92□□□□□ -1.3
AP3S1-202ENST00000395548 ATRNL1Q5VV63 1379 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 CHD7Q9P2D1 2997 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 PSME4Q14997 1843 aa6.92□□□□□ -1.3
AP3S1-202ENST00000395548 MYO9BQ13459 2157 aa6.91□□□□□ -1.3
AP3S1-202ENST00000395548 LRRC37A2A6NM11 1700 aa6.91□□□□□ -1.3
AP3S1-202ENST00000395548 MYOCOSA0A1B0GUC4 107 aa6.91□□□□□ -1.3
AP3S1-202ENST00000395548 CLRN2A0PK11 232 aa6.91□□□□□ -1.3
AP3S1-202ENST00000395548 FADS2P1A8MWK0 482 aa6.91□□□□□ -1.3
AP3S1-202ENST00000395548 C9IYK1 514 aa6.91□□□□□ -1.3
AP3S1-202ENST00000395548 HRKO00198 91 aa6.91□□□□□ -1.3
AP3S1-202ENST00000395548 KCNQ3O43525 872 aa6.91□□□□□ -1.3
AP3S1-202ENST00000395548 ZSCAN22P10073 491 aaPredicted RBP6.91□□□□□ -1.3
AP3S1-202ENST00000395548 CTSKP43235 329 aa6.91□□□□□ -1.3
AP3S1-202ENST00000395548 GALK1P51570 392 aa6.91□□□□□ -1.3
AP3S1-202ENST00000395548 DLG4P78352 724 aa6.91□□□□□ -1.3
AP3S1-202ENST00000395548 HSP90AB3PQ58FF7 597 aa6.91□□□□□ -1.3
AP3S1-202ENST00000395548 NOL9Q5SY16 702 aaKnown RBP6.91□□□□□ -1.3
AP3S1-202ENST00000395548 MAP3K21Q5TCX8 1036 aa6.91□□□□□ -1.3
AP3S1-202ENST00000395548 TTLL5Q6EMB2 1281 aa6.91□□□□□ -1.3
AP3S1-202ENST00000395548 TTLL7Q6ZT98 887 aa6.91□□□□□ -1.3
AP3S1-202ENST00000395548 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.91□□□□□ -1.3
AP3S1-202ENST00000395548 ATOH1Q92858 354 aaPredicted RBP6.91□□□□□ -1.3
AP3S1-202ENST00000395548 TRMT112Q9UI30 125 aaKnown RBP6.91□□□□□ -1.3
AP3S1-202ENST00000395548 TAF6LQ9Y6J9 622 aa6.91□□□□□ -1.3
AP3S1-202ENST00000395548 NUP98P52948 1817 aa6.91□□□□□ -1.3
AP3S1-202ENST00000395548 LTBP2Q14767 1821 aa6.91□□□□□ -1.3
AP3S1-202ENST00000395548 ZNF318Q5VUA4 2279 aa6.9□□□□□ -1.3
AP3S1-202ENST00000395548 A0A1W2PQ45 241 aaPredicted RBP6.9□□□□□ -1.3
AP3S1-202ENST00000395548 A0A1W2PQY0 241 aa6.9□□□□□ -1.3
AP3S1-202ENST00000395548 PROB1E7EW31 1015 aa6.9□□□□□ -1.3
AP3S1-202ENST00000395548 ARL4AP40617 200 aa6.9□□□□□ -1.3
AP3S1-202ENST00000395548 PAK2Q13177 524 aa6.9□□□□□ -1.3
AP3S1-202ENST00000395548 SF3B3Q15393 1217 aaKnown RBP6.9□□□□□ -1.3
AP3S1-202ENST00000395548 OLFML2BQ68BL8 750 aa6.9□□□□□ -1.3
AP3S1-202ENST00000395548 UNC5AQ6ZN44 842 aa6.9□□□□□ -1.3
AP3S1-202ENST00000395548 NOL8Q76FK4 1167 aaKnown RBP6.9□□□□□ -1.3
AP3S1-202ENST00000395548 FAM178BQ8IXR5 827 aa6.9□□□□□ -1.3
AP3S1-202ENST00000395548 HOOK2Q96ED9 719 aa6.9□□□□□ -1.3
AP3S1-202ENST00000395548 MXD3Q9BW11 206 aa6.9□□□□□ -1.3
AP3S1-202ENST00000395548 SLC12A7Q9Y666 1083 aa6.9□□□□□ -1.3
AP3S1-202ENST00000395548 XDHP47989 1333 aa6.9□□□□□ -1.3
AP3S1-202ENST00000395548 MGAMO43451 1857 aa6.9□□□□□ -1.31
AP3S1-202ENST00000395548 ACACBO00763 2458 aa6.89□□□□□ -1.31
AP3S1-202ENST00000395548 FASNP49327 2511 aaKnown RBP6.89□□□□□ -1.31
AP3S1-202ENST00000395548 ABLIM1O14639 778 aa6.89□□□□□ -1.31
AP3S1-202ENST00000395548 NUAK1O60285 661 aa6.89□□□□□ -1.31
AP3S1-202ENST00000395548 CYP2C8P10632 490 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms