RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 FAM20AQ96MK3 541 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 ZNF577Q9BSK1 485 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 CLDND1Q9NY35 253 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 SSX2IPQ9Y2D8 614 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 ASAP2O43150 1006 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 FGF18O76093 207 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 MUTP22033 750 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 EIF4BP23588 611 aaKnown RBP7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 METAP2P50579 478 aaKnown RBP eCLIP7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 NHLH1Q02575 133 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 NPY5RQ15761 445 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 SRGAP1Q7Z6B7 1085 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 TMEM40Q8WWA1 233 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 HERC2P3Q9BVR0 1158 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 ADAM7Q9H2U9 754 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 KCNMB3Q9NPA1 279 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 LRFN2Q9ULH4 789 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 PCDHA4Q9UN74 947 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 SNX14Q9Y5W7 946 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 ZNF318Q5VUA4 2279 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 NUP210Q8TEM1 1887 aaPredicted RBP7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 KLF18A0A0U1RQI7 1052 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 TMEM221A6NGB7 291 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 M0R296 226 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 PDXDC2PQ6P474 469 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 LRRC55Q6ZSA7 311 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 RASEFQ8IZ41 740 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 ZNF558Q96NG5 402 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 TEKT3Q9BXF9 490 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 SPG21Q9NZD8 308 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 TCEAL9Q9UHQ7 104 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 USP15Q9Y4E8 981 aaPredicted RBP7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 V9GY48 417 aaPredicted RBP7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 COL9A3Q14050 684 aaPredicted RBP7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 ADGRD2Q7Z7M1 963 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 CYP2W1Q8TAV3 490 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 NXPE3Q969Y0 559 aa7.04□□□□□ -1.28
SMARCAD1-203ENST00000394961 KIAA1549LQ6ZVL6 1849 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 MSH4O15457 936 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 DEXIO95424 95 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 XRCC6P12956 609 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 ANAPC15P60006 121 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 DLX2Q07687 328 aaPredicted RBP7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 ADCK5Q3MIX3 580 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 KRT25Q7Z3Z0 450 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 MICU3Q86XE3 530 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 FBXL6Q8N531 539 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 MAP7D2Q96T17 732 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 ADAM2Q99965 735 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 SUPT16HQ9Y5B9 1047 aaKnown RBP7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 ZNF862O60290 1169 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 REC8O95072 547 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 CTSAP10619 480 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 CREMQ03060 361 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 SYCE2Q6PIF2 218 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 C4orf19Q8IY42 314 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 PLCD3Q8N3E9 789 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 MRPL43Q8N983 215 aaKnown RBP7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 DHX33Q9H6R0 707 aaKnown RBP7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 RXFP1Q9HBX9 757 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 TMEM260Q9NX78 707 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 KANSL3Q9P2N6 904 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 VAV3Q9UKW4 847 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 MYH15Q9Y2K3 1946 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 C2orf71A6NGG8 1288 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 LINC01565O15544 149 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 CLASP2O75122 1294 aaKnown RBP7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 NCLP19338 710 aaKnown RBP7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 PDIA3P30101 505 aaKnown RBP7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 CLLU1OSQ5K130 101 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 KCNT2Q6UVM3 1135 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 C15orf39Q6ZRI6 1047 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 RUFY3Q7L099 469 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 PRSS33Q8NF86 280 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 ANO2Q9NQ90 1003 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 DISC1Q9NRI5 854 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 AGPAT5Q9NUQ2 364 aa7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 PUF60Q9UHX1 559 aaKnown RBP7.03□□□□□ -1.28
SMARCAD1-203ENST00000394961 TSC2P49815 1807 aa7.02□□□□□ -1.28
SMARCAD1-203ENST00000394961 MIA3Q5JRA6 1907 aa7.02□□□□□ -1.28
SMARCAD1-203ENST00000394961 DENND3A2RUS2 1198 aa7.02□□□□□ -1.29
SMARCAD1-203ENST00000394961 SFPQP23246 707 aaKnown RBP eCLIP7.02□□□□□ -1.29
SMARCAD1-203ENST00000394961 NBL1P41271 181 aa7.02□□□□□ -1.29
SMARCAD1-203ENST00000394961 PHKA2P46019 1235 aa7.02□□□□□ -1.29
SMARCAD1-203ENST00000394961 BMS1Q14692 1282 aaKnown RBP7.02□□□□□ -1.29
SMARCAD1-203ENST00000394961 SWSAP1Q6NVH7 229 aa7.02□□□□□ -1.29
SMARCAD1-203ENST00000394961 BLOC1S2Q6QNY1 142 aa7.02□□□□□ -1.29
SMARCAD1-203ENST00000394961 PPP4R3CPQ6ZMV5 832 aa7.02□□□□□ -1.29
SMARCAD1-203ENST00000394961 PGBD4Q96DM1 585 aa7.02□□□□□ -1.29
SMARCAD1-203ENST00000394961 PHF20Q9BVI0 1012 aa7.02□□□□□ -1.29
SMARCAD1-203ENST00000394961 GCOM2Q9BZD3 368 aaPredicted RBP7.02□□□□□ -1.29
SMARCAD1-203ENST00000394961 CDHR5Q9HBB8 845 aa7.02□□□□□ -1.29
SMARCAD1-203ENST00000394961 MARK3P27448 753 aa7.02□□□□□ -1.29
SMARCAD1-203ENST00000394961 PSMC5P62195 406 aa7.02□□□□□ -1.29
SMARCAD1-203ENST00000394961 PRKCEQ02156 737 aa7.02□□□□□ -1.29
SMARCAD1-203ENST00000394961 KRT17Q04695 432 aa7.02□□□□□ -1.29
SMARCAD1-203ENST00000394961 TOB2Q14106 344 aaPredicted RBP7.02□□□□□ -1.29
SMARCAD1-203ENST00000394961 FAM187BQ17R55 369 aa7.02□□□□□ -1.29
SMARCAD1-203ENST00000394961 TCP11Q8WWU5 503 aa7.02□□□□□ -1.29
SMARCAD1-203ENST00000394961 FBXL18Q96ME1 805 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms