RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 Q4G0T1 1027 aa19.97■□□□□ 0.79
PCDHA1-202ENST00000394633 CNPY4Q8N129 248 aa19.97■□□□□ 0.79
PCDHA1-202ENST00000394633 OLIG1Q8TAK6 271 aa19.97■□□□□ 0.79
PCDHA1-202ENST00000394633 AMACRQ9UHK6 382 aa19.97■□□□□ 0.79
PCDHA1-202ENST00000394633 CAPN7Q9Y6W3 813 aa19.97■□□□□ 0.79
PCDHA1-202ENST00000394633 TBX3O15119 743 aa19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 DAPK3O43293 454 aa19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 CTNNA1P35221 906 aaKnown RBP19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 IPO4Q8TEX9 1081 aaKnown RBP19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 U2AF1L4Q8WU68 220 aaKnown RBP19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 LMBR1Q8WVP7 490 aa19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 RUSC1Q9BVN2 902 aa19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 INTUQ9ULD6 942 aa19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 FAM86B1E9PN63 330 aa19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 MYO1FO00160 1098 aa19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 GFPT2O94808 682 aa19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 FAM107AO95990 144 aa19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 HLA-DOAP06340 250 aa19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 FAM86B2P0C5J1 330 aa19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 MICALCLQ6ZW33 695 aa19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 VPS36Q86VN1 386 aa19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 ARFGAP2Q8N6H7 521 aa19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 PRPF38AQ8NAV1 312 aaKnown RBP19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 LNX1Q8TBB1 728 aaPredicted RBP19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 JDP2Q8WYK2 163 aa19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 HES6Q96HZ4 224 aa19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 DNAJC18Q9H819 358 aa19.96■□□□□ 0.79
PCDHA1-202ENST00000394633 E7EVH7 732 aa19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 FSBPO95073 299 aa19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 GCNT3O95395 438 aa19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 EEF2P13639 858 aaKnown RBP19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 GUCY2CP25092 1073 aa19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 RPL13P26373 211 aaKnown RBP19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 SNAP25P60880 206 aa19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 CYP4A11Q02928 519 aa19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 SLFN13Q68D06 897 aa19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 YTHDF3Q7Z739 585 aaKnown RBP19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 DAAM2Q86T65 1068 aa19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 DCAF4Q8WV16 495 aa19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 UBLCP1Q8WVY7 318 aaPredicted RBP19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 BORCS6Q96GS4 357 aa19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 BHMT2Q9H2M3 363 aa19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 SLITRK6Q9H5Y7 841 aa19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 SLC12A6Q9UHW9 1150 aa19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 TTI1O43156 1089 aa19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 FERP16591 822 aa19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 GALCP54803 685 aa19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 NPEPPSP55786 919 aa19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 SYCE1Q8N0S2 351 aa19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 PCDHB13Q9Y5F0 798 aa19.95■□□□□ 0.78
PCDHA1-202ENST00000394633 GTPBP10A4D1E9 387 aaKnown RBP19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 DDTLA6NHG4 134 aaPredicted RBP19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 SPDYE2BA6NHP3 402 aa19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 TGFB1I1O43294 461 aa19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 SPDYE6P0CI01 402 aa19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 PPARDQ03181 441 aa19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 SH3BP5LQ7L8J4 393 aa19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 SLC30A5Q8TAD4 765 aa19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 SEC14L1Q92503 715 aa19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 CCDC17Q96LX7 622 aa19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 CELF4Q9BZC1 486 aaKnown RBP19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 IKZF4Q9H2S9 585 aa19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 PPANQ9NQ55 473 aaKnown RBP19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 VAV3Q9UKW4 847 aa19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 ZMYM2Q9UBW7 1377 aa19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 FAM196BA6NMK8 535 aa19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 BIRC3Q13489 604 aa19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 RUFY4Q6ZNE9 571 aa19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 TMC3Q7Z5M5 1100 aa19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 MKL1Q969V6 931 aa19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 IDI2Q9BXS1 227 aa19.94■□□□□ 0.78
PCDHA1-202ENST00000394633 LTBP3Q9NS15 1303 aa19.93■□□□□ 0.78
PCDHA1-202ENST00000394633 CLRN2A0PK11 232 aa19.93■□□□□ 0.78
PCDHA1-202ENST00000394633 MSH4O15457 936 aa19.93■□□□□ 0.78
PCDHA1-202ENST00000394633 EVI5O60447 810 aa19.93■□□□□ 0.78
PCDHA1-202ENST00000394633 TBCAO75347 108 aaKnown RBP19.93■□□□□ 0.78
PCDHA1-202ENST00000394633 STAT1P42224 750 aa19.93■□□□□ 0.78
PCDHA1-202ENST00000394633 MTMR3Q13615 1198 aa19.93■□□□□ 0.78
PCDHA1-202ENST00000394633 MCTP2Q6DN12 878 aa19.93■□□□□ 0.78
PCDHA1-202ENST00000394633 CIAPIN1Q6FI81 312 aa19.93■□□□□ 0.78
PCDHA1-202ENST00000394633 CCDC26Q8TAB7 109 aa19.93■□□□□ 0.78
PCDHA1-202ENST00000394633 FAM20AQ96MK3 541 aa19.93■□□□□ 0.78
PCDHA1-202ENST00000394633 OSGEPQ9NPF4 335 aa19.93■□□□□ 0.78
PCDHA1-202ENST00000394633 GGA2Q9UJY4 613 aa19.93■□□□□ 0.78
PCDHA1-202ENST00000394633 AMFRQ9UKV5 643 aa19.93■□□□□ 0.78
PCDHA1-202ENST00000394633 NCANO14594 1321 aa19.93■□□□□ 0.78
PCDHA1-202ENST00000394633 TAL1P17542 331 aaPredicted RBP19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 SREBF1P36956 1147 aa19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 POU5F1Q01860 360 aaKnown RBP19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 AGBL2Q5U5Z8 902 aa19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 C6orf89Q6UWU4 347 aa19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 CYFIP2Q96F07 1278 aa19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 BCCIPQ9P287 314 aaKnown RBP eCLIP19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 CNOT8Q9UFF9 292 aaKnown RBP19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 SMCHD1A6NHR9 2005 aa19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 SFI1A8K8P3 1242 aa19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 EML1O00423 815 aa19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 BUB1BO60566 1050 aaPredicted RBP19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 EYA4O95677 639 aa19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 EGFRP00533 1210 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms