RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 KIAA0391O15091 583 aaKnown RBP17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 MED24O75448 989 aa17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 SLC16A2P36021 539 aa17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 CCNHP51946 323 aaPredicted RBP17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 PSMC6P62333 389 aa17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 LLGL1Q15334 1064 aa17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 ZDHHC24Q6UX98 284 aa17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 ARHGEF26Q96DR7 871 aa17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 SIX2Q9NPC8 291 aa17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 ANKIB1Q9P2G1 1089 aa17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 PTPN22Q9Y2R2 807 aa17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 A0A0A6YYK5 440 aaPredicted RBP17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 CFAP73A6NFT4 308 aa17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 TULP1O00294 542 aaPredicted RBP17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 RAD21O60216 631 aa17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 RFC4P35249 363 aa17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 KCNA1Q09470 495 aa17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 C6orf118Q5T5N4 469 aa17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 ALG3Q92685 438 aa17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 KLHL29Q96CT2 875 aa17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 CHORDC1Q9UHD1 332 aaPredicted RBP17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 RPTORQ8N122 1335 aa17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 KDM3AQ9Y4C1 1321 aa17.76■□□□□ 0.43
EFEMP1-202ENST00000394555 TCP11X1B4DZS4 312 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 RASGRF2O14827 1237 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 RARAP10276 462 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 RPL21P46778 160 aaKnown RBP17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 SLC8A3P57103 927 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 SATB1Q01826 763 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 CRELD2Q6UXH1 353 aaPredicted RBP17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 PPP4R3CPQ6ZMV5 832 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 ANKRD42Q8N9B4 389 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 MICAL1Q8TDZ2 1067 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 TAS2R14Q9NYV8 317 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 NOP53Q9NZM5 478 aaKnown RBP17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 TRIM33Q9UPN9 1127 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 AFF2P51816 1311 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 FOXO6A8MYZ6 492 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 HOXA7P31268 230 aaPredicted RBP17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 HOXD13P35453 343 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 BTDP43251 543 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 NCALDP61601 193 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 MAPK7Q13164 816 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 PLS1Q14651 629 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 ZKSCAN8Q15776 578 aaPredicted RBP17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 BZW1Q7L1Q6 419 aaKnown RBP17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 RFFLQ8WZ73 363 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 ANKRD2Q9GZV1 360 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 THAP2Q9H0W7 228 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 RASAL2Q9UJF2 1139 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 SCN7AQ01118 1682 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 ROBO3Q96MS0 1386 aa17.75■□□□□ 0.43
EFEMP1-202ENST00000394555 SNX3O60493 162 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 AGTP01019 485 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 NR3C1P04150 777 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 FERP16591 822 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 TTBK2Q6IQ55 1244 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 BARGINQ6ZT62 677 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 NAP1L3Q99457 506 aaPredicted RBP17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 DHX36Q9H2U1 1008 aaKnown RBP17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 SFI1A8K8P3 1242 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 RSPH10B2B2RC85 870 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 USP17L15C9J2P7 530 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 USP17L13C9JLJ4 530 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 USP17L11C9JVI0 530 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 USP17L18D6R9N7 530 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 USP17L22D6RA61 530 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 USP17L17D6RBQ6 530 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 USP17L19D6RCP7 530 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 USP17L20D6RJB6 530 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 PPP1R12AO14974 1030 aaPredicted RBP17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 RSPH10BP0C881 870 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 JAM2P57087 298 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 ADCY2Q08462 1091 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 USP17L24Q0WX57 530 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 LONRF1Q17RB8 773 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 NUGGCQ68CJ6 796 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 USP17L6PQ6QN14 398 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 C16orf86Q6ZW13 317 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 MARCH10Q8NA82 808 aaPredicted RBP17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 SLC35C1Q96A29 364 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 ZNF570Q96NI8 536 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 KCNK9Q9NPC2 374 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 PNMA3Q9UL41 463 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 PPP1R11O60927 126 aaPredicted RBP17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 KRT16P08779 473 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 CREB1P16220 341 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 PDE6CP51160 858 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 NPEPPSP55786 919 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 RIPK1Q13546 671 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 ZNF268Q14587 947 aaPredicted RBP17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 CNGA2Q16280 664 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 ARHGAP44Q17R89 818 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 GDAP1Q8TB36 358 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 REEP2Q9BRK0 252 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 MTRF1LQ9UGC7 380 aaKnown RBP17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 NENFQ9UMX5 172 aa17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 THRAP3Q9Y2W1 955 aaKnown RBP17.74■□□□□ 0.43
EFEMP1-202ENST00000394555 SNED1Q8TER0 1413 aa17.73■□□□□ 0.43
EFEMP1-202ENST00000394555 CALUO43852 315 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms