RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	CCDC122	Q5T0U0	273 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	C10orf76	Q5T2E6	689 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	GBP6	Q6ZN66	633 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	RSRC2	Q7L4I2	434 aa	Known RBP	10.11	□□□□□ -0.79
MITF-205	ENST00000394348	RRAGA	Q7L523	313 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	SRGAP1	Q7Z6B7	1085 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	FAM186B	Q8IYM0	893 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	DAW1	Q8N136	415 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	SMCR8	Q8TEV9	937 aa	Predicted RBP	10.11	□□□□□ -0.79
MITF-205	ENST00000394348	TSC1	Q92574	1164 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	RABGGTA	Q92696	567 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	GOLGA1	Q92805	767 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	ATP6V0A1	Q93050	837 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	SLC35C1	Q96A29	364 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	VTI1A	Q96AJ9	217 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	CCDC43	Q96MW1	224 aa	Known RBP	10.11	□□□□□ -0.79
MITF-205	ENST00000394348	CARD6	Q9BX69	1037 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	MOV10L1	Q9BXT6	1211 aa	Known RBP	10.11	□□□□□ -0.79
MITF-205	ENST00000394348	DEF6	Q9H4E7	631 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	AGPAT3	Q9NRZ7	376 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	ARGLU1	Q9NWB6	273 aa	Predicted RBP	10.11	□□□□□ -0.79
MITF-205	ENST00000394348	CYP39A1	Q9NYL5	469 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	CSAD	Q9Y600	493 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	ZC3H4	Q9UPT8	1303 aa	Known RBP	10.1	□□□□□ -0.79
MITF-205	ENST00000394348	LCT	P09848	1927 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	CXCL11	O14625	94 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	IRF6	O14896	467 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	PMM2	O15305	246 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	P4HA2	O15460	535 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	AKR1B10	O60218	316 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	N4BP1	O75113	896 aa	Known RBP	10.1	□□□□□ -0.79
MITF-205	ENST00000394348	MYCL	P12524	364 aa	Predicted RBP	10.1	□□□□□ -0.79
MITF-205	ENST00000394348	KCNA2	P16389	499 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	NMT1	P30419	496 aa	Known RBP	10.1	□□□□□ -0.79
MITF-205	ENST00000394348	EIF4A3	P38919	411 aa	Known RBP	10.1	□□□□□ -0.79
MITF-205	ENST00000394348	PRKCI	P41743	596 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	IREB2	P48200	963 aa	Known RBP	10.1	□□□□□ -0.79
MITF-205	ENST00000394348	NCKAP1L	P55160	1127 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	GTF2B	Q00403	316 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	AMPD2	Q01433	879 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	PPAT	Q06203	517 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	DGKZ	Q13574	1117 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	VGLL4	Q14135	290 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	ELF2	Q15723	593 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	ASIC2	Q16515	512 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	PAPD7	Q5XG87	772 aa	Known RBP	10.1	□□□□□ -0.79
MITF-205	ENST00000394348	HGSNAT	Q68CP4	663 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	DPY19L2P1	Q6NXN4	242 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.1	□□□□□ -0.79
MITF-205	ENST00000394348	OTUD6A	Q7L8S5	288 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	TRAPPC11	Q7Z392	1133 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	RIOX2	Q8IUF8	465 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	SULF1	Q8IWU6	871 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	PLPP6	Q8IY26	295 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	RNF10	Q8N5U6	811 aa	Known RBP	10.1	□□□□□ -0.79
MITF-205	ENST00000394348	CCDC155	Q8N6L0	562 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	GPR161	Q8N6U8	529 aa	Known RBP	10.1	□□□□□ -0.79
MITF-205	ENST00000394348	TRIM58	Q8NG06	486 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	ZC3H15	Q8WU90	426 aa	Known RBP	10.1	□□□□□ -0.79
MITF-205	ENST00000394348	SPIRE2	Q8WWL2	714 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	KIFAP3	Q92845	792 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	DCPS	Q96C86	337 aa	Known RBP	10.1	□□□□□ -0.79
MITF-205	ENST00000394348	WNK4	Q96J92	1243 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	RPGRIP1	Q96KN7	1286 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	ACCS	Q96QU6	501 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	IFIH1	Q9BYX4	1025 aa	Known RBP	10.1	□□□□□ -0.79
MITF-205	ENST00000394348	A1CF	Q9NQ94	594 aa	Known RBP	10.1	□□□□□ -0.79
MITF-205	ENST00000394348	FRMD4B	Q9Y2L6	1034 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	RIPK3	Q9Y572	518 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	PCDHA13	Q9Y5I0	950 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	PCDHA10	Q9Y5I2	948 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	ARID2	Q68CP9	1835 aa		10.1	□□□□□ -0.79
MITF-205	ENST00000394348	WDR81	Q562E7	1941 aa		10.09	□□□□□ -0.79
MITF-205	ENST00000394348	LOC102724159	A0A0B4J2E5	919 aa		10.09	□□□□□ -0.79
MITF-205	ENST00000394348		A0A0G2JLL6	359 aa	Predicted RBP	10.09	□□□□□ -0.79
MITF-205	ENST00000394348	TESPA1	A2RU30	521 aa	Predicted RBP	10.09	□□□□□ -0.79
MITF-205	ENST00000394348	BTNL10	A8MVZ5	291 aa		10.09	□□□□□ -0.79
MITF-205	ENST00000394348	SPATA31C2	B4DYI2	1134 aa		10.09	□□□□□ -0.79
MITF-205	ENST00000394348		H0YCG3	227 aa		10.09	□□□□□ -0.79
MITF-205	ENST00000394348		K7ENM7	598 aa		10.09	□□□□□ -0.79
MITF-205	ENST00000394348	DDX39A	O00148	427 aa	Known RBP	10.09	□□□□□ -0.79
MITF-205	ENST00000394348	TACC1	O75410	805 aa		10.09	□□□□□ -0.79
MITF-205	ENST00000394348	CCNE2	O96020	404 aa		10.09	□□□□□ -0.79
MITF-205	ENST00000394348	PSAP	P07602	524 aa		10.09	□□□□□ -0.79
MITF-205	ENST00000394348	PRLR	P16471	622 aa		10.09	□□□□□ -0.79
MITF-205	ENST00000394348	PON1	P27169	355 aa		10.09	□□□□□ -0.79
MITF-205	ENST00000394348	POLR2F	P61218	127 aa	Known RBP	10.09	□□□□□ -0.79
MITF-205	ENST00000394348	CKAP4	Q07065	602 aa	Known RBP	10.09	□□□□□ -0.79
MITF-205	ENST00000394348	PWP2	Q15269	919 aa	Known RBP	10.09	□□□□□ -0.79
MITF-205	ENST00000394348	KLHDC7A	Q5VTJ3	777 aa		10.09	□□□□□ -0.79
MITF-205	ENST00000394348	USP50	Q70EL3	339 aa	Predicted RBP	10.09	□□□□□ -0.79
MITF-205	ENST00000394348	INTS8	Q75QN2	995 aa	Known RBP	10.09	□□□□□ -0.79
MITF-205	ENST00000394348	PRRT2	Q7Z6L0	340 aa	Predicted RBP	10.09	□□□□□ -0.79
MITF-205	ENST00000394348	MCPH1	Q8NEM0	835 aa		10.09	□□□□□ -0.79
MITF-205	ENST00000394348	SECISBP2L	Q93073	1101 aa	Known RBP	10.09	□□□□□ -0.79
MITF-205	ENST00000394348	CCDC94	Q9BW85	323 aa	Predicted RBP	10.09	□□□□□ -0.79
MITF-205	ENST00000394348	IRX2	Q9BZI1	471 aa	Predicted RBP	10.09	□□□□□ -0.79
MITF-205	ENST00000394348	EXOC7	Q9UPT5	735 aa		10.09	□□□□□ -0.79
MITF-205	ENST00000394348	USP20	Q9Y2K6	914 aa		10.09	□□□□□ -0.79
MITF-205	ENST00000394348	SAMM50	Q9Y512	469 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms