RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 MEFVO15553 781 aaPredicted RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 KRT1P04264 644 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 ARFIP2P53365 341 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 EIF6P56537 245 aaKnown RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 HIC1Q14526 733 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 IMPG1Q17R60 797 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 ATP13A5Q4VNC0 1218 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 ZCWPW2Q504Y3 356 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 SGO2Q562F6 1265 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 SLC10A5Q5PT55 438 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 C6orf183Q5T699 404 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 HMBOX1Q6NT76 420 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 IQCF2Q8IXL9 164 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 DDIASQ8IXT1 998 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 SMC5Q8IY18 1101 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 PPM1KQ8N3J5 372 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 SH2D3CQ8N5H7 860 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 C19orf18Q8NEA5 215 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 LRRC37BQ96QE4 947 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 RIOK1Q9BRS2 568 aaKnown RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 NOD2Q9HC29 1040 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 NPHS2Q9NP85 383 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 SAYSD1Q9NPB0 183 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 PICK1Q9NRD5 415 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 TMEM161AQ9NX61 479 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 MARCOQ9UEW3 520 aaPredicted RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 PCDHB13Q9Y5F0 798 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 C2orf74A8MZ97 194 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 CFAP99D6REC4 459 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 TRIM24O15164 1050 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 NR1I2O75469 434 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 ERCC2P18074 760 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 PLCD1P51178 756 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 MADCAM1Q13477 382 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 HADHQ16836 314 aaKnown RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 CFAP70Q5T0N1 1121 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 FAM45BPQ6NSW5 357 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 TTC33Q6PID6 262 aaPredicted RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 TXNDC11Q6PKC3 985 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 CRTC1Q6UUV9 634 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 MICALL2Q8IY33 904 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 KBTBD2Q8IY47 623 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 MYCT1Q8N699 235 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 ZNF614Q8N883 585 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 RBBP8NLQ8NC74 664 aaPredicted RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 MAIP1Q8WWC4 291 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 S100PBPQ96BU1 408 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 MLPHQ9BV36 600 aaPredicted RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 SLC13A1Q9BZW2 595 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 ZNF287Q9HBT7 754 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 CASS4Q9NQ75 786 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 TIMM8BQ9Y5J9 83 aaPredicted RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 ERBB4Q15303 1308 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 NPHP3Q7Z494 1330 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 TTI1O43156 1089 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 NCK2O43639 380 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 TOM1O60784 492 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 ATP9AO75110 1047 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 ECEL1O95672 775 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 PRR29P0C7W0 189 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 ENO3P13929 434 aaPredicted RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 FEN1P39748 380 aaKnown RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 SFSWAPQ12872 951 aaKnown RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 USP4Q13107 963 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 IL31Q6EBC2 164 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 CC2D1AQ6P1N0 951 aaPredicted RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 CNNM4Q6P4Q7 775 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 TOGARAM2Q6ZUX3 1019 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 CCNYL1Q8N7R7 359 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 IQUBQ8NA54 791 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 XXYLT1Q8NBI6 393 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 TNIP3Q96KP6 325 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 NUP58Q9BVL2 599 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 ROGDIQ9GZN7 287 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 RETREG1Q9H6L5 497 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 RUBCNLQ9H714 662 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 ZFATQ9P243 1243 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 AFF4Q9UHB7 1163 aaKnown RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 FAM153AQ9UHL3 310 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 TTC41PQ6P2S7 1318 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 RASA4BC9J798 803 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 MUSKO15146 869 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 RASA4O43374 803 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 USP12O75317 370 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 PRPF6O94906 941 aaKnown RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 ARIH2O95376 493 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 BRD1O95696 1058 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 SCNN1BP51168 640 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 POLGP54098 1239 aaPredicted RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 RARSP54136 660 aaKnown RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 ZNF445P59923 1031 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 ETF1P62495 437 aaKnown RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 TNFAIP2Q03169 654 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 TBRG1Q3YBR2 411 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 RNASE12Q5GAN4 147 aaKnown RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 ARMC4Q5T2S8 1044 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 DARS2Q6PI48 645 aaKnown RBP3.48□□□□□ -1.85
PHF3-202ENST00000393387 CCNYQ8ND76 341 aa3.48□□□□□ -1.85
PHF3-202ENST00000393387 USP44Q9H0E7 712 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms