RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 TECP42680 631 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 POLGP54098 1239 aaPredicted RBP13.22□□□□□ -0.29
RFC4-202ENST00000392481 NBR1Q14596 966 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 XKR9Q5GH70 373 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 LARP1BQ659C4 914 aaKnown RBP13.22□□□□□ -0.29
RFC4-202ENST00000392481 NPAS4Q8IUM7 802 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 NLRP7Q8WX94 980 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 RNF216Q9NWF9 866 aaPredicted RBP13.22□□□□□ -0.29
RFC4-202ENST00000392481 UNC80Q8N2C7 3258 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 DENND3A2RUS2 1198 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 EPOPA6NHQ4 379 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 MGEA5O60502 916 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 STAG3L1P0CL83 205 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 SPATA31C1P0DKV0 1188 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 XRCC6P12956 609 aaKnown RBP eCLIP13.22□□□□□ -0.29
RFC4-202ENST00000392481 IGFBP4P22692 258 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 PTGDRQ13258 359 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 RILPL1Q5EBL4 403 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 SLC24A5Q71RS6 500 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 SPRED2Q7Z698 418 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 ZNF410Q86VK4 478 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 RHPN2Q8IUC4 686 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 ERMNQ8TAM6 284 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 ZNF668Q96K58 619 aaPredicted RBP13.22□□□□□ -0.29
RFC4-202ENST00000392481 ADAM2Q99965 735 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 POLR3CQ9BUI4 534 aaPredicted RBP13.22□□□□□ -0.29
RFC4-202ENST00000392481 GCOM2Q9BZD3 368 aaPredicted RBP13.22□□□□□ -0.29
RFC4-202ENST00000392481 RC3H2Q9HBD1 1191 aaKnown RBP13.22□□□□□ -0.29
RFC4-202ENST00000392481 TUFT1Q9NNX1 390 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 RGS18Q9NS28 235 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 C1orf112Q9NSG2 853 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 PCDHB6Q9Y5E3 794 aa13.22□□□□□ -0.29
RFC4-202ENST00000392481 RFXAPO00287 272 aa13.21□□□□□ -0.3
RFC4-202ENST00000392481 LAD1O00515 517 aa13.21□□□□□ -0.3
RFC4-202ENST00000392481 DGKIO75912 1065 aa13.21□□□□□ -0.3
RFC4-202ENST00000392481 RPA1P27694 616 aa13.21□□□□□ -0.3
RFC4-202ENST00000392481 SARSP49591 514 aaKnown RBP13.21□□□□□ -0.3
RFC4-202ENST00000392481 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.3
RFC4-202ENST00000392481 FAM189BP81408 668 aa13.21□□□□□ -0.3
RFC4-202ENST00000392481 PDIA5Q14554 519 aa13.21□□□□□ -0.3
RFC4-202ENST00000392481 DSC3Q14574 896 aa13.21□□□□□ -0.3
RFC4-202ENST00000392481 EMC2Q15006 297 aa13.21□□□□□ -0.3
RFC4-202ENST00000392481 CATSPER3Q86XQ3 398 aa13.21□□□□□ -0.3
RFC4-202ENST00000392481 TCP11Q8WWU5 503 aa13.21□□□□□ -0.3
RFC4-202ENST00000392481 PRPF31Q8WWY3 499 aaKnown RBP13.21□□□□□ -0.3
RFC4-202ENST00000392481 PSPC1Q8WXF1 523 aaKnown RBP13.21□□□□□ -0.3
RFC4-202ENST00000392481 ZNF689Q96CS4 500 aaPredicted RBP13.21□□□□□ -0.3
RFC4-202ENST00000392481 SAMD11Q96NU1 681 aa13.21□□□□□ -0.3
RFC4-202ENST00000392481 INO80BQ9C086 356 aaPredicted RBP13.21□□□□□ -0.3
RFC4-202ENST00000392481 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.21□□□□□ -0.3
RFC4-202ENST00000392481 MTUS1Q9ULD2 1270 aa13.21□□□□□ -0.3
RFC4-202ENST00000392481 COL4A3BPQ9Y5P4 624 aa13.21□□□□□ -0.3
RFC4-202ENST00000392481 ARID2Q68CP9 1835 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 ADGRA3Q8IWK6 1321 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 A0A087WZ62 844 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 C9IYK1 514 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 ASAP2O43150 1006 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 GTPBP6O43824 516 aaPredicted RBP13.2□□□□□ -0.3
RFC4-202ENST00000392481 MED24O75448 989 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 ZSCAN20P17040 1043 aaPredicted RBP13.2□□□□□ -0.3
RFC4-202ENST00000392481 PDCP20941 246 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 MUTP22033 750 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 PRPHP41219 470 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 RARRES1P49788 294 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 KSR1Q8IVT5 923 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 FIBCD1Q8N539 461 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 SLC17A8Q8NDX2 589 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 PIGOQ8TEQ8 1089 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 TMEM143Q96AN5 459 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 INTS4Q96HW7 963 aaKnown RBP13.2□□□□□ -0.3
RFC4-202ENST00000392481 CCDC43Q96MW1 224 aaKnown RBP13.2□□□□□ -0.3
RFC4-202ENST00000392481 NACC1Q96RE7 527 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 FDXACB1Q9BRP7 624 aaPredicted RBP13.2□□□□□ -0.3
RFC4-202ENST00000392481 C17orf80Q9BSJ5 609 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 RAB34Q9BZG1 259 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 LRFN2Q9ULH4 789 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 PCDHB7Q9Y5E2 793 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 REV3LO60673 3130 aa13.2□□□□□ -0.3
RFC4-202ENST00000392481 TTC28Q96AY4 2481 aa13.19□□□□□ -0.3
RFC4-202ENST00000392481 LPXNO60711 386 aa13.19□□□□□ -0.3
RFC4-202ENST00000392481 DGAT1O75907 488 aa13.19□□□□□ -0.3
RFC4-202ENST00000392481 SFPQP23246 707 aaKnown RBP eCLIP13.19□□□□□ -0.3
RFC4-202ENST00000392481 LAMTOR4Q0VGL1 99 aa13.19□□□□□ -0.3
RFC4-202ENST00000392481 GRB10Q13322 594 aa13.19□□□□□ -0.3
RFC4-202ENST00000392481 BTG3Q14201 252 aaPredicted RBP13.19□□□□□ -0.3
RFC4-202ENST00000392481 EPC2Q52LR7 807 aa13.19□□□□□ -0.3
RFC4-202ENST00000392481 HAUS3Q68CZ6 603 aa13.19□□□□□ -0.3
RFC4-202ENST00000392481 TMEM192Q8IY95 271 aa13.19□□□□□ -0.3
RFC4-202ENST00000392481 CMTR2Q8IYT2 770 aaKnown RBP13.19□□□□□ -0.3
RFC4-202ENST00000392481 IGSF22Q8N9C0 903 aa13.19□□□□□ -0.3
RFC4-202ENST00000392481 FBXO22Q8NEZ5 403 aa13.19□□□□□ -0.3
RFC4-202ENST00000392481 CLP1Q92989 425 aaKnown RBP13.19□□□□□ -0.3
RFC4-202ENST00000392481 NLRP4Q96MN2 994 aa13.19□□□□□ -0.3
RFC4-202ENST00000392481 MTRQ99707 1265 aa13.19□□□□□ -0.3
RFC4-202ENST00000392481 IFT122Q9HBG6 1241 aa13.19□□□□□ -0.3
RFC4-202ENST00000392481 XPNPEP1Q9NQW7 623 aa13.19□□□□□ -0.3
RFC4-202ENST00000392481 BMP2KQ9NSY1 1161 aaPredicted RBP13.19□□□□□ -0.3
RFC4-202ENST00000392481 LMCD1Q9NZU5 365 aa13.19□□□□□ -0.3
RFC4-202ENST00000392481 LRWD1Q9UFC0 647 aa13.19□□□□□ -0.3
RFC4-202ENST00000392481 DBR1Q9UK59 544 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms