RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 RAD9BQ6WBX8 426 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 TOGARAM2Q6ZUX3 1019 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 EEPD1Q7L9B9 569 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 REXO1L1PQ8IX06 675 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 ZNF397Q8NF99 534 aaPredicted RBP12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 AFAP1L1Q8TED9 768 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 HVCN1Q96D96 273 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 ACCSQ96QU6 501 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 EDEM3Q9BZQ6 932 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 ATP6V0A4Q9HBG4 840 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 AGPAT5Q9NUQ2 364 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 GOLGA6L9A6NEM1 432 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 ARIH2O95376 493 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 TUBB4AP04350 444 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 XRCC5P13010 732 aaKnown RBP12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 PSMC2P35998 433 aaKnown RBP12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 CASP4P49662 377 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 TERF1P54274 439 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 PEX3P56589 373 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 KCNMA1Q12791 1236 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 KCNH2Q12809 1159 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 DMP1Q13316 513 aaPredicted RBP12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 MEA1Q16626 185 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 LY6KQ17RY6 165 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 TSR1Q2NL82 804 aaKnown RBP12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 ZNF792Q3KQV3 632 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 FAM160B1Q5W0V3 765 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 CHADLQ6NUI6 762 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 HAUS6Q7Z4H7 955 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 SYCP3Q8IZU3 236 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 SPIRE2Q8WWL2 714 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 SEPT1Q8WYJ6 367 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 BORCS6Q96GS4 357 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 PTPN18Q99952 460 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 NTPCRQ9BSD7 190 aaKnown RBP12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 NIFKQ9BYG3 293 aaKnown RBP12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 R3HCC1Q9Y3T6 440 aaKnown RBP12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 SMTNP53814 917 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 MTF1Q14872 753 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 FAM110CQ1W6H9 321 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 CELF3Q5SZQ8 465 aaKnown RBP12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 CCDC62Q6P9F0 684 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 C12orf56Q8IXR9 622 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 PRIMPOLQ96LW4 560 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 PCYT2Q99447 389 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 IKZF4Q9H2S9 585 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 MMRN2Q9H8L6 949 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 MLXIPQ9HAP2 919 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 XPNPEP1Q9NQW7 623 aa12.56□□□□□ -0.4
SMARCAL1-203ENST00000392128 ZNF236Q9UL36 1845 aa12.55□□□□□ -0.4
SMARCAL1-203ENST00000392128 AFPP02771 609 aaKnown RBP12.55□□□□□ -0.4
SMARCAL1-203ENST00000392128 CCDC175P0C221 793 aa12.55□□□□□ -0.4
SMARCAL1-203ENST00000392128 ADORA2AP29274 412 aa12.55□□□□□ -0.4
SMARCAL1-203ENST00000392128 HNRNPH3P31942 346 aaKnown RBP12.55□□□□□ -0.4
SMARCAL1-203ENST00000392128 NPTX2P47972 431 aa12.55□□□□□ -0.4
SMARCAL1-203ENST00000392128 CDK17Q00537 523 aa12.55□□□□□ -0.4
SMARCAL1-203ENST00000392128 ZNF467Q7Z7K2 595 aaPredicted RBP12.55□□□□□ -0.4
SMARCAL1-203ENST00000392128 FBXO16Q8IX29 292 aaPredicted RBP12.55□□□□□ -0.4
SMARCAL1-203ENST00000392128 FAM186BQ8IYM0 893 aa12.55□□□□□ -0.4
SMARCAL1-203ENST00000392128 CCDC155Q8N6L0 562 aa12.55□□□□□ -0.4
SMARCAL1-203ENST00000392128 TMEM161BQ8NDZ6 487 aa12.55□□□□□ -0.4
SMARCAL1-203ENST00000392128 NEK11Q8NG66 645 aa12.55□□□□□ -0.4
SMARCAL1-203ENST00000392128 FAM207AQ9NSI2 230 aaPredicted RBP12.55□□□□□ -0.4
SMARCAL1-203ENST00000392128 ADGRG1Q9Y653 693 aa12.55□□□□□ -0.4
SMARCAL1-203ENST00000392128 EPHB6O15197 1021 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 SLC16A4O15374 487 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 TCF7P36402 384 aaPredicted RBP12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 STAT5BP51692 787 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 HUNKP57058 714 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 MTERF2Q49AM1 385 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 WDR59Q6PJI9 974 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 ARMCX2Q7L311 632 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 SLC35C1Q96A29 364 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 DHX33Q9H6R0 707 aaKnown RBP12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 ZNHIT6Q9NWK9 470 aaKnown RBP12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 KCNG1Q9UIX4 513 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 FRMD4BQ9Y2L6 1034 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 PPME1Q9Y570 386 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 IVNS1ABPQ9Y6Y0 642 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 LGR5O75473 907 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 ABCD1P33897 745 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 TTLL4Q14679 1199 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 EMC2Q15006 297 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 SCFD2Q8WU76 684 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 BSNDQ8WZ55 320 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 CEP89Q96ST8 783 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 GPR20Q99678 358 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 DESI2Q9BSY9 194 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 KMT5AQ9NQR1 393 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 NRBP2Q9NSY0 501 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 EXOC7Q9UPT5 735 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 SIP14410 1827 aa12.54□□□□□ -0.4
SMARCAL1-203ENST00000392128 GTPBP10A4D1E9 387 aaKnown RBP12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 CCDC169A6NNP5 214 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 RFC5P40937 340 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 CYP2J2P51589 502 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 POLGP54098 1239 aaPredicted RBP12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 TARBP2Q15633 366 aaKnown RBP12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 RASAL3Q86YV0 1011 aa12.53□□□□□ -0.4
SMARCAL1-203ENST00000392128 MAP4K3Q8IVH8 894 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms