RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 DGAT1O75907 488 aa14.15□□□□□ -0.14
GGPS1-203ENST00000391855 UPP2O95045 317 aa14.15□□□□□ -0.14
GGPS1-203ENST00000391855 DARSP14868 501 aaKnown RBP14.15□□□□□ -0.14
GGPS1-203ENST00000391855 PRPHP41219 470 aa14.15□□□□□ -0.14
GGPS1-203ENST00000391855 TECP42680 631 aa14.15□□□□□ -0.14
GGPS1-203ENST00000391855 NPEPPSP55786 919 aa14.15□□□□□ -0.14
GGPS1-203ENST00000391855 ARID2Q68CP9 1835 aa14.15□□□□□ -0.14
GGPS1-203ENST00000391855 LOXHD1Q8IVV2 1947 aa14.15□□□□□ -0.14
GGPS1-203ENST00000391855 ADGRA3Q8IWK6 1321 aa14.15□□□□□ -0.14
GGPS1-203ENST00000391855 NLRP7Q8WX94 980 aa14.15□□□□□ -0.14
GGPS1-203ENST00000391855 PSPC1Q8WXF1 523 aaKnown RBP14.15□□□□□ -0.14
GGPS1-203ENST00000391855 PPP1R16BQ96T49 567 aa14.15□□□□□ -0.14
GGPS1-203ENST00000391855 TMX1Q9H3N1 280 aa14.15□□□□□ -0.14
GGPS1-203ENST00000391855 CDHR5Q9HBB8 845 aa14.15□□□□□ -0.14
GGPS1-203ENST00000391855 SUCLA2Q9P2R7 463 aaPredicted RBP14.15□□□□□ -0.14
GGPS1-203ENST00000391855 RWDD3Q9Y3V2 267 aa14.15□□□□□ -0.14
GGPS1-203ENST00000391855 TTC3P53804 2025 aa14.14□□□□□ -0.15
GGPS1-203ENST00000391855 ASAP2O43150 1006 aa14.14□□□□□ -0.15
GGPS1-203ENST00000391855 GTPBP6O43824 516 aaPredicted RBP14.14□□□□□ -0.15
GGPS1-203ENST00000391855 SFPQP23246 707 aaKnown RBP eCLIP14.14□□□□□ -0.15
GGPS1-203ENST00000391855 RPA1P27694 616 aa14.14□□□□□ -0.15
GGPS1-203ENST00000391855 SARSP49591 514 aaKnown RBP14.14□□□□□ -0.15
GGPS1-203ENST00000391855 TOB1P50616 345 aaPredicted RBP14.14□□□□□ -0.15
GGPS1-203ENST00000391855 ERVK-21P61565 698 aa14.14□□□□□ -0.15
GGPS1-203ENST00000391855 EMC2Q15006 297 aa14.14□□□□□ -0.15
GGPS1-203ENST00000391855 BRAPQ7Z569 592 aa14.14□□□□□ -0.15
GGPS1-203ENST00000391855 MAFAQ8NHW3 353 aaPredicted RBP14.14□□□□□ -0.15
GGPS1-203ENST00000391855 ARNTL2Q8WYA1 636 aa14.14□□□□□ -0.15
GGPS1-203ENST00000391855 SNX21Q969T3 373 aa14.14□□□□□ -0.15
GGPS1-203ENST00000391855 MTRQ99707 1265 aa14.14□□□□□ -0.15
GGPS1-203ENST00000391855 SH2D3AQ9BRG2 576 aa14.14□□□□□ -0.15
GGPS1-203ENST00000391855 ATP6V0A4Q9HBG4 840 aa14.14□□□□□ -0.15
GGPS1-203ENST00000391855 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.14□□□□□ -0.15
GGPS1-203ENST00000391855 RGS18Q9NS28 235 aa14.14□□□□□ -0.15
GGPS1-203ENST00000391855 COL4A3BPQ9Y5P4 624 aa14.14□□□□□ -0.15
GGPS1-203ENST00000391855 SZT2Q5T011 3432 aa14.13□□□□□ -0.15
GGPS1-203ENST00000391855 ARHGEF15O94989 841 aa14.13□□□□□ -0.15
GGPS1-203ENST00000391855 BMP15O95972 392 aa14.13□□□□□ -0.15
GGPS1-203ENST00000391855 ZSCAN20P17040 1043 aaPredicted RBP14.13□□□□□ -0.15
GGPS1-203ENST00000391855 POU3F3P20264 500 aaPredicted RBP14.13□□□□□ -0.15
GGPS1-203ENST00000391855 PTGDRQ13258 359 aa14.13□□□□□ -0.15
GGPS1-203ENST00000391855 DRP2Q13474 957 aa14.13□□□□□ -0.15
GGPS1-203ENST00000391855 PDIA5Q14554 519 aa14.13□□□□□ -0.15
GGPS1-203ENST00000391855 SLC24A5Q71RS6 500 aa14.13□□□□□ -0.15
GGPS1-203ENST00000391855 RHPN2Q8IUC4 686 aa14.13□□□□□ -0.15
GGPS1-203ENST00000391855 CMTR2Q8IYT2 770 aaKnown RBP14.13□□□□□ -0.15
GGPS1-203ENST00000391855 FIBCD1Q8N539 461 aa14.13□□□□□ -0.15
GGPS1-203ENST00000391855 C4orf32Q8N8J7 132 aa14.13□□□□□ -0.15
GGPS1-203ENST00000391855 NACC1Q96RE7 527 aa14.13□□□□□ -0.15
GGPS1-203ENST00000391855 ADAM2Q99965 735 aa14.13□□□□□ -0.15
GGPS1-203ENST00000391855 ELAC1Q9H777 363 aaKnown RBP14.13□□□□□ -0.15
GGPS1-203ENST00000391855 RC3H2Q9HBD1 1191 aaKnown RBP14.13□□□□□ -0.15
GGPS1-203ENST00000391855 LRWD1Q9UFC0 647 aa14.13□□□□□ -0.15
GGPS1-203ENST00000391855 DBR1Q9UK59 544 aaKnown RBP14.13□□□□□ -0.15
GGPS1-203ENST00000391855 LRFN2Q9ULH4 789 aa14.13□□□□□ -0.15
GGPS1-203ENST00000391855 PCDHB6Q9Y5E3 794 aa14.13□□□□□ -0.15
GGPS1-203ENST00000391855 DGKIO75912 1065 aa14.12□□□□□ -0.15
GGPS1-203ENST00000391855 SPATA31C1P0DKV0 1188 aa14.12□□□□□ -0.15
GGPS1-203ENST00000391855 RARRES1P49788 294 aa14.12□□□□□ -0.15
GGPS1-203ENST00000391855 ATP2C1P98194 919 aaPredicted RBP14.12□□□□□ -0.15
GGPS1-203ENST00000391855 DSC3Q14574 896 aa14.12□□□□□ -0.15
GGPS1-203ENST00000391855 MXD4Q14582 209 aaPredicted RBP14.12□□□□□ -0.15
GGPS1-203ENST00000391855 NBR1Q14596 966 aa14.12□□□□□ -0.15
GGPS1-203ENST00000391855 DTHD1Q6ZMT9 781 aa14.12□□□□□ -0.15
GGPS1-203ENST00000391855 RTN4RL1Q86UN2 441 aaPredicted RBP14.12□□□□□ -0.15
GGPS1-203ENST00000391855 CATSPER3Q86XQ3 398 aa14.12□□□□□ -0.15
GGPS1-203ENST00000391855 CRIPAKQ8N1N5 446 aa14.12□□□□□ -0.15
GGPS1-203ENST00000391855 IGSF22Q8N9C0 903 aa14.12□□□□□ -0.15
GGPS1-203ENST00000391855 CHST12Q9NRB3 414 aa14.12□□□□□ -0.15
GGPS1-203ENST00000391855 DACT1Q9NYF0 836 aa14.12□□□□□ -0.15
GGPS1-203ENST00000391855 LMCD1Q9NZU5 365 aa14.12□□□□□ -0.15
GGPS1-203ENST00000391855 RALGAPA2Q2PPJ7 1873 aa14.12□□□□□ -0.15
GGPS1-203ENST00000391855 A0A087WZ62 844 aa14.11□□□□□ -0.15
GGPS1-203ENST00000391855 C9IYK1 514 aa14.11□□□□□ -0.15
GGPS1-203ENST00000391855 HOXA2O43364 376 aa14.11□□□□□ -0.15
GGPS1-203ENST00000391855 MGEA5O60502 916 aa14.11□□□□□ -0.15
GGPS1-203ENST00000391855 MED24O75448 989 aa14.11□□□□□ -0.15
GGPS1-203ENST00000391855 IGFBP4P22692 258 aa14.11□□□□□ -0.15
GGPS1-203ENST00000391855 TFDP1Q14186 410 aa14.11□□□□□ -0.15
GGPS1-203ENST00000391855 BTG3Q14201 252 aaPredicted RBP14.11□□□□□ -0.15
GGPS1-203ENST00000391855 ADGRE1Q14246 886 aa14.11□□□□□ -0.15
GGPS1-203ENST00000391855 PCBP1Q15365 356 aaKnown RBP eCLIP14.11□□□□□ -0.15
GGPS1-203ENST00000391855 ARL6IP4Q66PJ3 421 aaKnown RBP14.11□□□□□ -0.15
GGPS1-203ENST00000391855 SRGAP1Q7Z6B7 1085 aa14.11□□□□□ -0.15
GGPS1-203ENST00000391855 FERMT3Q86UX7 667 aa14.11□□□□□ -0.15
GGPS1-203ENST00000391855 HSCBQ8IWL3 235 aa14.11□□□□□ -0.15
GGPS1-203ENST00000391855 ZNF579Q8NAF0 562 aaKnown RBP14.11□□□□□ -0.15
GGPS1-203ENST00000391855 MCPH1Q8NEM0 835 aa14.11□□□□□ -0.15
GGPS1-203ENST00000391855 RSPH1Q8WYR4 309 aa14.11□□□□□ -0.15
GGPS1-203ENST00000391855 ZNF689Q96CS4 500 aaPredicted RBP14.11□□□□□ -0.15
GGPS1-203ENST00000391855 NLRP4Q96MN2 994 aa14.11□□□□□ -0.15
GGPS1-203ENST00000391855 FDXACB1Q9BRP7 624 aaPredicted RBP14.11□□□□□ -0.15
GGPS1-203ENST00000391855 CERS4Q9HA82 394 aa14.11□□□□□ -0.15
GGPS1-203ENST00000391855 TMEM161AQ9NX61 479 aa14.11□□□□□ -0.15
GGPS1-203ENST00000391855 PCDHB7Q9Y5E2 793 aa14.11□□□□□ -0.15
GGPS1-203ENST00000391855 COL4A4P53420 1690 aaPredicted RBP14.1□□□□□ -0.15
GGPS1-203ENST00000391855 VPS37CA5D8V6 355 aaPredicted RBP14.1□□□□□ -0.15
GGPS1-203ENST00000391855 RB1P06400 928 aa14.1□□□□□ -0.15
GGPS1-203ENST00000391855 PRR29P0C7W0 189 aa14.1□□□□□ -0.15
GGPS1-203ENST00000391855 CCT6AP40227 531 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms