RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 SELENOSQ9BQE4 189 aa22.78■■□□□ 1.24
COL23A1-201ENST00000390654 SH2D3AQ9BRG2 576 aa22.78■■□□□ 1.24
COL23A1-201ENST00000390654 PKD2L1Q9P0L9 805 aa22.78■■□□□ 1.24
COL23A1-201ENST00000390654 RPL13P26373 211 aaKnown RBP22.78■■□□□ 1.24
COL23A1-201ENST00000390654 C15orf52Q6ZUT6 534 aaKnown RBP22.78■■□□□ 1.24
COL23A1-201ENST00000390654 EPM2AIP1Q7L775 607 aaPredicted RBP22.78■■□□□ 1.24
COL23A1-201ENST00000390654 CPLX4Q7Z7G2 160 aa22.78■■□□□ 1.24
COL23A1-201ENST00000390654 SUGP1Q8IWZ8 645 aaKnown RBP22.78■■□□□ 1.24
COL23A1-201ENST00000390654 ARFGAP2Q8N6H7 521 aa22.78■■□□□ 1.24
COL23A1-201ENST00000390654 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.78■■□□□ 1.24
COL23A1-201ENST00000390654 C10orf76Q5T2E6 689 aa22.78■■□□□ 1.24
COL23A1-201ENST00000390654 FOXR2Q6PJQ5 311 aa22.78■■□□□ 1.24
COL23A1-201ENST00000390654 LMBR1Q8WVP7 490 aa22.78■■□□□ 1.24
COL23A1-201ENST00000390654 CTNNBL1Q8WYA6 563 aaPredicted RBP22.78■■□□□ 1.24
COL23A1-201ENST00000390654 ELMO3Q96BJ8 720 aa22.78■■□□□ 1.24
COL23A1-201ENST00000390654 JAM2P57087 298 aa22.77■■□□□ 1.24
COL23A1-201ENST00000390654 ZC3H3Q8IXZ2 948 aaKnown RBP22.77■■□□□ 1.24
COL23A1-201ENST00000390654 FMO2Q99518 471 aa22.77■■□□□ 1.24
COL23A1-201ENST00000390654 CCDC113Q9H0I3 377 aa22.77■■□□□ 1.24
COL23A1-201ENST00000390654 STXBP5LQ9Y2K9 1186 aa22.77■■□□□ 1.24
COL23A1-201ENST00000390654 TISP43B9A030 160 aa22.77■■□□□ 1.24
COL23A1-201ENST00000390654 POLRMTO00411 1230 aaKnown RBP22.77■■□□□ 1.24
COL23A1-201ENST00000390654 CRKP46108 304 aa22.77■■□□□ 1.24
COL23A1-201ENST00000390654 MARCKSL1P49006 195 aa22.77■■□□□ 1.24
COL23A1-201ENST00000390654 NBPF9Q3BBW0 867 aa22.77■■□□□ 1.24
COL23A1-201ENST00000390654 RINT1Q6NUQ1 792 aa22.77■■□□□ 1.24
COL23A1-201ENST00000390654 RUFY4Q6ZNE9 571 aa22.77■■□□□ 1.24
COL23A1-201ENST00000390654 OSBPL7Q9BZF2 842 aa22.77■■□□□ 1.24
COL23A1-201ENST00000390654 PCIF1Q9H4Z3 704 aa22.77■■□□□ 1.24
COL23A1-201ENST00000390654 ACP6Q9NPH0 428 aa22.77■■□□□ 1.24
COL23A1-201ENST00000390654 F5H6K3 240 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 F8VZ95 297 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 CFBP00751 764 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 IRX3P78415 501 aaPredicted RBP22.76■■□□□ 1.23
COL23A1-201ENST00000390654 KLRC3Q07444 240 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 BANK1Q8NDB2 785 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 ALG3Q92685 438 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 DYDC2Q96IM9 177 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 SUCLA2Q9P2R7 463 aaPredicted RBP22.76■■□□□ 1.23
COL23A1-201ENST00000390654 PLIN4Q96Q06 1357 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 DNM1LO00429 736 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 PRKCIP41743 596 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 ICA1Q05084 483 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 FBXO11Q86XK2 927 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 SLC20A1Q8WUM9 679 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 HOOK2Q96ED9 719 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 HES6Q96HZ4 224 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 SWAP70Q9UH65 585 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 DDX39AO00148 427 aaKnown RBP22.76■■□□□ 1.23
COL23A1-201ENST00000390654 ATMINO43313 823 aaPredicted RBP22.76■■□□□ 1.23
COL23A1-201ENST00000390654 TRAPPC3O43617 180 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 SOX5P35711 763 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 DR1Q01658 176 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 LRIG3Q6UXM1 1119 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 CPNE8Q86YQ8 564 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 C18orf8Q96DM3 657 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 SEC16BQ96JE7 1060 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 GJD4Q96KN9 370 aaPredicted RBP22.76■■□□□ 1.23
COL23A1-201ENST00000390654 CALR3Q96L12 384 aaKnown RBP22.76■■□□□ 1.23
COL23A1-201ENST00000390654 AMNQ9BXJ7 453 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 COG5Q9UP83 839 aa22.76■■□□□ 1.23
COL23A1-201ENST00000390654 SCAF8Q9UPN6 1271 aaKnown RBP22.76■■□□□ 1.23
COL23A1-201ENST00000390654 LOC102724159A0A0B4J2E5 919 aa22.75■■□□□ 1.23
COL23A1-201ENST00000390654 BTNL10A8MVZ5 291 aa22.75■■□□□ 1.23
COL23A1-201ENST00000390654 CCDC188H7C350 402 aa22.75■■□□□ 1.23
COL23A1-201ENST00000390654 FSBPO95073 299 aa22.75■■□□□ 1.23
COL23A1-201ENST00000390654 PWP2Q15269 919 aaKnown RBP22.75■■□□□ 1.23
COL23A1-201ENST00000390654 CERKQ8TCT0 537 aa22.75■■□□□ 1.23
COL23A1-201ENST00000390654 COA1Q9GZY4 146 aa22.75■■□□□ 1.23
COL23A1-201ENST00000390654 PTPN22Q9Y2R2 807 aa22.75■■□□□ 1.23
COL23A1-201ENST00000390654 MYO3BQ8WXR4 1341 aa22.75■■□□□ 1.23
COL23A1-201ENST00000390654 TNFAIP3P21580 790 aa22.75■■□□□ 1.23
COL23A1-201ENST00000390654 METTL14Q9HCE5 456 aaKnown RBP22.75■■□□□ 1.23
COL23A1-201ENST00000390654 HAUS2Q9NVX0 235 aa22.75■■□□□ 1.23
COL23A1-201ENST00000390654 SMCHD1A6NHR9 2005 aa22.74■■□□□ 1.23
COL23A1-201ENST00000390654 FERP16591 822 aa22.74■■□□□ 1.23
COL23A1-201ENST00000390654 FMO5P49326 533 aa22.74■■□□□ 1.23
COL23A1-201ENST00000390654 SLFN11Q7Z7L1 901 aa22.74■■□□□ 1.23
COL23A1-201ENST00000390654 FBXO25Q8TCJ0 367 aa22.74■■□□□ 1.23
COL23A1-201ENST00000390654 KRT35Q92764 455 aa22.74■■□□□ 1.23
COL23A1-201ENST00000390654 TDRD3Q9H7E2 651 aaKnown RBP22.74■■□□□ 1.23
COL23A1-201ENST00000390654 CTNND1O60716 968 aaKnown RBP22.74■■□□□ 1.23
COL23A1-201ENST00000390654 JAG1P78504 1218 aa22.74■■□□□ 1.23
COL23A1-201ENST00000390654 CCDC38Q502W7 563 aa22.74■■□□□ 1.23
COL23A1-201ENST00000390654 SIAH1Q8IUQ4 282 aa22.74■■□□□ 1.23
COL23A1-201ENST00000390654 SYCE1Q8N0S2 351 aa22.74■■□□□ 1.23
COL23A1-201ENST00000390654 ATP8B4Q8TF62 1192 aa22.74■■□□□ 1.23
COL23A1-201ENST00000390654 FOXN3O00409 490 aaPredicted RBP22.73■■□□□ 1.23
COL23A1-201ENST00000390654 PSMC2P35998 433 aaKnown RBP22.73■■□□□ 1.23
COL23A1-201ENST00000390654 IFNAR2P48551 515 aa22.73■■□□□ 1.23
COL23A1-201ENST00000390654 CCDC174Q6PII3 467 aa22.73■■□□□ 1.23
COL23A1-201ENST00000390654 VCPKMTQ9H867 229 aa22.73■■□□□ 1.23
COL23A1-201ENST00000390654 SLC40A1Q9NP59 571 aa22.73■■□□□ 1.23
COL23A1-201ENST00000390654 CYP3A7-CYP3A51PA0A087WV96 503 aa22.73■■□□□ 1.23
COL23A1-201ENST00000390654 CYP3A7P24462 503 aa22.73■■□□□ 1.23
COL23A1-201ENST00000390654 SETQ01105 290 aaPredicted RBP22.73■■□□□ 1.23
COL23A1-201ENST00000390654 CCDC25Q86WR0 208 aa22.73■■□□□ 1.23
COL23A1-201ENST00000390654 BTBD6Q96KE9 485 aa22.73■■□□□ 1.23
COL23A1-201ENST00000390654 PSMD1Q99460 953 aa22.73■■□□□ 1.23
COL23A1-201ENST00000390654 CTTNBP2NLQ9P2B4 639 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms