RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 FBXO38Q6PIJ6 1188 aa19.9■□□□□ 0.78
ACTN4-202ENST00000390009 FAM133AQ8N9E0 248 aa19.9■□□□□ 0.78
ACTN4-202ENST00000390009 ATP6V0A1Q93050 837 aa19.9■□□□□ 0.78
ACTN4-202ENST00000390009 ACCSQ96QU6 501 aa19.9■□□□□ 0.78
ACTN4-202ENST00000390009 MYH10P35580 1976 aa19.9■□□□□ 0.78
ACTN4-202ENST00000390009 A0A0G2JLL6 359 aaPredicted RBP19.9■□□□□ 0.78
ACTN4-202ENST00000390009 MACROD2A1Z1Q3 448 aa19.9■□□□□ 0.78
ACTN4-202ENST00000390009 ZNF862O60290 1169 aa19.9■□□□□ 0.78
ACTN4-202ENST00000390009 PSAPP07602 524 aa19.9■□□□□ 0.78
ACTN4-202ENST00000390009 PEX3P56589 373 aa19.9■□□□□ 0.78
ACTN4-202ENST00000390009 AMPD2Q01433 879 aa19.9■□□□□ 0.78
ACTN4-202ENST00000390009 MYBPC2Q14324 1141 aa19.9■□□□□ 0.78
ACTN4-202ENST00000390009 FAM102BQ5T8I3 360 aa19.9■□□□□ 0.78
ACTN4-202ENST00000390009 HAUS6Q7Z4H7 955 aa19.9■□□□□ 0.78
ACTN4-202ENST00000390009 PRRT2Q7Z6L0 340 aaPredicted RBP19.9■□□□□ 0.78
ACTN4-202ENST00000390009 RIOX2Q8IUF8 465 aa19.9■□□□□ 0.78
ACTN4-202ENST00000390009 PROCA1Q8NCQ7 364 aaPredicted RBP19.9■□□□□ 0.78
ACTN4-202ENST00000390009 CLMNQ96JQ2 1002 aa19.9■□□□□ 0.78
ACTN4-202ENST00000390009 ST6GALNAC4Q9H4F1 302 aa19.9■□□□□ 0.78
ACTN4-202ENST00000390009 TELO2Q9Y4R8 837 aa19.9■□□□□ 0.78
ACTN4-202ENST00000390009 FHOD1Q9Y613 1164 aa19.9■□□□□ 0.78
ACTN4-202ENST00000390009 RBAK-RBAKDNI3L0D1 243 aa19.89■□□□□ 0.77
ACTN4-202ENST00000390009 PFASO15067 1338 aa19.89■□□□□ 0.77
ACTN4-202ENST00000390009 EXOC3O60645 756 aa19.89■□□□□ 0.77
ACTN4-202ENST00000390009 DKC1O60832 514 aaKnown RBP eCLIP19.89■□□□□ 0.77
ACTN4-202ENST00000390009 GTF2BQ00403 316 aa19.89■□□□□ 0.77
ACTN4-202ENST00000390009 CNTN2Q02246 1040 aa19.89■□□□□ 0.77
ACTN4-202ENST00000390009 SP4Q02446 784 aa19.89■□□□□ 0.77
ACTN4-202ENST00000390009 ARID5AQ03989 594 aa19.89■□□□□ 0.77
ACTN4-202ENST00000390009 STXBP2Q15833 593 aa19.89■□□□□ 0.77
ACTN4-202ENST00000390009 ASIC2Q16515 512 aa19.89■□□□□ 0.77
ACTN4-202ENST00000390009 SWSAP1Q6NVH7 229 aa19.89■□□□□ 0.77
ACTN4-202ENST00000390009 RSRC2Q7L4I2 434 aaKnown RBP19.89■□□□□ 0.77
ACTN4-202ENST00000390009 OTUD6AQ7L8S5 288 aa19.89■□□□□ 0.77
ACTN4-202ENST00000390009 SRGAP1Q7Z6B7 1085 aa19.89■□□□□ 0.77
ACTN4-202ENST00000390009 CEP112Q8N8E3 955 aa19.89■□□□□ 0.77
ACTN4-202ENST00000390009 SECISBP2LQ93073 1101 aaKnown RBP19.89■□□□□ 0.77
ACTN4-202ENST00000390009 SIX2Q9NPC8 291 aa19.89■□□□□ 0.77
ACTN4-202ENST00000390009 FBXO40Q9UH90 709 aa19.89■□□□□ 0.77
ACTN4-202ENST00000390009 ENC1O14682 589 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 MAGEA1P43355 309 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 NCKAP1LP55160 1127 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 ACTR2P61160 394 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 PPP2R5AQ15172 486 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 ERO1BQ86YB8 467 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 ANKRD13AQ8IZ07 590 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 CDCA5Q96FF9 252 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 SPAG5Q96R06 1193 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 FBXL5Q9UKA1 691 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 MYO6Q9UM54 1294 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 TISP43B9A030 160 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 SLC16A4O15374 487 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 STBD1O95210 358 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 NF2P35240 595 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 FMO5P49326 533 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 IRX3P78415 501 aaPredicted RBP19.88■□□□□ 0.77
ACTN4-202ENST00000390009 KLHL30Q0D2K2 578 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 TEX35Q5T0J7 233 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 DPY19L2Q6NUT2 758 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 MOB2Q70IA6 237 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 CCDC60Q8IWA6 550 aaPredicted RBP19.88■□□□□ 0.77
ACTN4-202ENST00000390009 CEP170P1Q96L14 293 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 PUF60Q9UHX1 559 aaKnown RBP19.88■□□□□ 0.77
ACTN4-202ENST00000390009 SRCAPQ6ZRS2 3230 aa19.88■□□□□ 0.77
ACTN4-202ENST00000390009 SORBS3O60504 671 aa19.87■□□□□ 0.77
ACTN4-202ENST00000390009 EIF3JO75822 258 aaKnown RBP19.87■□□□□ 0.77
ACTN4-202ENST00000390009 ATP1A1P05023 1023 aaKnown RBP19.87■□□□□ 0.77
ACTN4-202ENST00000390009 H2AFXP16104 143 aaPredicted RBP19.87■□□□□ 0.77
ACTN4-202ENST00000390009 CHMP4BP1P59074 171 aa19.87■□□□□ 0.77
ACTN4-202ENST00000390009 FSTL1Q12841 308 aa19.87■□□□□ 0.77
ACTN4-202ENST00000390009 BFSP1Q12934 665 aa19.87■□□□□ 0.77
ACTN4-202ENST00000390009 WHAMMP3Q1A5X7 153 aa19.87■□□□□ 0.77
ACTN4-202ENST00000390009 ABHD15Q6UXT9 468 aa19.87■□□□□ 0.77
ACTN4-202ENST00000390009 USP50Q70EL3 339 aaPredicted RBP19.87■□□□□ 0.77
ACTN4-202ENST00000390009 C12orf56Q8IXR9 622 aa19.87■□□□□ 0.77
ACTN4-202ENST00000390009 SLC17A8Q8NDX2 589 aa19.87■□□□□ 0.77
ACTN4-202ENST00000390009 TMEM174Q8WUU8 243 aa19.87■□□□□ 0.77
ACTN4-202ENST00000390009 GOLGA1Q92805 767 aa19.87■□□□□ 0.77
ACTN4-202ENST00000390009 SPATC1LQ9H0A9 340 aa19.87■□□□□ 0.77
ACTN4-202ENST00000390009 SPDYE5A6NIY4 337 aa19.87■□□□□ 0.77
ACTN4-202ENST00000390009 PJA2O43164 708 aa19.87■□□□□ 0.77
ACTN4-202ENST00000390009 TFRCP02786 760 aaKnown RBP19.87■□□□□ 0.77
ACTN4-202ENST00000390009 ALDH5A1P51649 535 aaPredicted RBP19.87■□□□□ 0.77
ACTN4-202ENST00000390009 SP2Q02086 613 aa19.87■□□□□ 0.77
ACTN4-202ENST00000390009 TRAPPC11Q7Z392 1133 aa19.87■□□□□ 0.77
ACTN4-202ENST00000390009 RDH13Q8NBN7 331 aa19.87■□□□□ 0.77
ACTN4-202ENST00000390009 L3MBTL3Q96JM7 780 aaPredicted RBP19.87■□□□□ 0.77
ACTN4-202ENST00000390009 ARID3AQ99856 593 aa19.87■□□□□ 0.77
ACTN4-202ENST00000390009 PCIF1Q9H4Z3 704 aa19.87■□□□□ 0.77
ACTN4-202ENST00000390009 CXCL11O14625 94 aa19.86■□□□□ 0.77
ACTN4-202ENST00000390009 TRIM49P0CI25 452 aa19.86■□□□□ 0.77
ACTN4-202ENST00000390009 TRIM49CP0CI26 452 aa19.86■□□□□ 0.77
ACTN4-202ENST00000390009 ICAM3P32942 547 aa19.86■□□□□ 0.77
ACTN4-202ENST00000390009 TTLL12Q14166 644 aaPredicted RBP19.86■□□□□ 0.77
ACTN4-202ENST00000390009 ENOX2Q16206 610 aaKnown RBP19.86■□□□□ 0.77
ACTN4-202ENST00000390009 SLC18A3Q16572 532 aa19.86■□□□□ 0.77
ACTN4-202ENST00000390009 MIS18BP1Q6P0N0 1132 aa19.86■□□□□ 0.77
ACTN4-202ENST00000390009 NCAPG2Q86XI2 1143 aa19.86■□□□□ 0.77
ACTN4-202ENST00000390009 TXLNBQ8N3L3 684 aa19.86■□□□□ 0.77
ACTN4-202ENST00000390009 CBWD1Q9BRT8 395 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms