RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 RNASELQ05823 741 aaKnown RBP17.33■□□□□ 0.37
PTPRN2-201ENST00000389413 RINT1Q6NUQ1 792 aa17.33■□□□□ 0.37
PTPRN2-201ENST00000389413 GDAP1Q8TB36 358 aa17.33■□□□□ 0.37
PTPRN2-201ENST00000389413 ZNF341Q9BYN7 854 aa17.33■□□□□ 0.37
PTPRN2-201ENST00000389413 SSX2IPQ9Y2D8 614 aa17.33■□□□□ 0.37
PTPRN2-201ENST00000389413 TFDP1Q14186 410 aa17.33■□□□□ 0.37
PTPRN2-201ENST00000389413 TTI2Q6NXR4 508 aa17.33■□□□□ 0.37
PTPRN2-201ENST00000389413 KRT27Q7Z3Y8 459 aa17.33■□□□□ 0.37
PTPRN2-201ENST00000389413 CLEC10AQ8IUN9 316 aa17.33■□□□□ 0.37
PTPRN2-201ENST00000389413 ZNF564Q8TBZ8 553 aaPredicted RBP17.33■□□□□ 0.37
PTPRN2-201ENST00000389413 MORC4Q8TE76 937 aa17.33■□□□□ 0.37
PTPRN2-201ENST00000389413 LXNQ9BS40 222 aa17.33■□□□□ 0.37
PTPRN2-201ENST00000389413 KCND1Q9NSA2 647 aa17.33■□□□□ 0.37
PTPRN2-201ENST00000389413 RGL1Q9NZL6 768 aa17.33■□□□□ 0.37
PTPRN2-201ENST00000389413 PALM3A6NDB9 673 aaPredicted RBP17.33■□□□□ 0.36
PTPRN2-201ENST00000389413 E2F4Q16254 413 aa17.33■□□□□ 0.36
PTPRN2-201ENST00000389413 PPP4R1Q8TF05 950 aa17.33■□□□□ 0.36
PTPRN2-201ENST00000389413 ANKRD36BP1Q96IX9 119 aa17.33■□□□□ 0.36
PTPRN2-201ENST00000389413 TUFT1Q9NNX1 390 aa17.33■□□□□ 0.36
PTPRN2-201ENST00000389413 FEM1BQ9UK73 627 aa17.33■□□□□ 0.36
PTPRN2-201ENST00000389413 K7ERI5 159 aa17.33■□□□□ 0.36
PTPRN2-201ENST00000389413 PPP1R37O75864 691 aa17.33■□□□□ 0.36
PTPRN2-201ENST00000389413 ZRANB2O95218 330 aaKnown RBP eCLIP17.33■□□□□ 0.36
PTPRN2-201ENST00000389413 MSH2P43246 934 aa17.33■□□□□ 0.36
PTPRN2-201ENST00000389413 TBX2Q13207 712 aaPredicted RBP17.33■□□□□ 0.36
PTPRN2-201ENST00000389413 SYN2Q92777 582 aaPredicted RBP17.33■□□□□ 0.36
PTPRN2-201ENST00000389413 L1RE1Q9UN81 338 aa17.33■□□□□ 0.36
PTPRN2-201ENST00000389413 ABCB11O95342 1321 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 IFT172Q9UG01 1749 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 WDR64B1ANS9 1081 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 SLC16A4O15374 487 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 ACTN1P12814 892 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 GUCY2CP25092 1073 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 NMT1P30419 496 aaKnown RBP17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 QARSP47897 775 aaKnown RBP17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 GUCY1A3Q02108 690 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 NAB2Q15742 525 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 ZNF746Q6NUN9 644 aaPredicted RBP17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 RSRC2Q7L4I2 434 aaKnown RBP17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 NCAPG2Q86XI2 1143 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 GBP7Q8N8V2 638 aaPredicted RBP17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 GABPB2Q8TAK5 448 aaPredicted RBP17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 RNPC3Q96LT9 517 aaKnown RBP17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 REEP2Q9BRK0 252 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 VCX3BQ9H321 246 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 ADAM22Q9P0K1 906 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 GPR75-ASB3A0A0A6YYF3 556 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 TFAMQ00059 246 aaKnown RBP17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 DHX34Q14147 1143 aaKnown RBP17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 TRIM68Q6AZZ1 485 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 SLFN12LQ6IEE8 588 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 ADGRA1Q86SQ6 560 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 SMARCAL1Q9NZC9 954 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 MAD1L1Q9Y6D9 718 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 RIMBP3CA6NJZ7 1639 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 RIMBP3BA6NNM3 1639 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 RIMBP3Q9UFD9 1639 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 DCAF8L1A6NGE4 600 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 ECM2O94769 699 aaPredicted RBP17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 KLRK1P26718 216 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 COL9A3Q14050 684 aaPredicted RBP17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 EPHA7Q15375 998 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 FIGNQ5HY92 759 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 TRIM50Q86XT4 487 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 MCPH1Q8NEM0 835 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 NUP85Q9BW27 656 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 JMJD4Q9H9V9 463 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 ODF2LQ9ULJ1 636 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 SPATA31A1Q5TZJ5 1347 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 ECE2O60344 883 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 ICE2Q659A1 982 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 STK33Q9BYT3 514 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 WNT8AQ9H1J5 351 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 TXLNGQ9NUQ3 528 aa17.32■□□□□ 0.36
PTPRN2-201ENST00000389413 EMSYQ7Z589 1322 aa17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 PABPN1LA6NDY0 278 aaKnown RBP17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 INO80B-WBP1J3KQ70 363 aa17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 MCF2LO15068 1137 aa17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 DYNLT1P63172 113 aa17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 SH2D3CQ8N5H7 860 aa17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 INO80BQ9C086 356 aaPredicted RBP17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 VIRMAQ69YN4 1812 aaKnown RBP17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 EIF3HO15372 352 aaKnown RBP eCLIP17.31■□□□□ 0.365e-6■■□□□ 14.2
PTPRN2-201ENST00000389413 GALCP54803 685 aa17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 CAV1Q03135 178 aa17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 CCDC93Q567U6 631 aa17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 SEPT14Q6ZU15 432 aa17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 RMDN3Q96TC7 470 aa17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 KIAA1586Q9HCI6 787 aa17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 FAM237AA0A1B0GTK4 181 aa17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 CD58P19256 250 aa17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 CA4P22748 312 aa17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 CEP55Q53EZ4 464 aa17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 KRT39Q6A163 491 aa17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 MSTO1Q9BUK6 570 aa17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 PITPNM2Q9BZ72 1349 aa17.31■□□□□ 0.36
PTPRN2-201ENST00000389413 PLEKP08567 350 aaPredicted RBP17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 KRT76Q01546 638 aa17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 MUM1L1Q5H9M0 696 aa17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 CCDC137Q6PK04 289 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms