RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 SLC17A8Q8NDX2 589 aa15.87■□□□□ 0.13
VPS9D1-201ENST00000389386 ZSCAN10Q96SZ4 725 aaPredicted RBP15.87■□□□□ 0.13
VPS9D1-201ENST00000389386 RIOK1Q9BRS2 568 aaKnown RBP15.87■□□□□ 0.13
VPS9D1-201ENST00000389386 PNPLA7Q6ZV29 1317 aa15.87■□□□□ 0.13
VPS9D1-201ENST00000389386 FLT1P17948 1338 aa15.87■□□□□ 0.13
VPS9D1-201ENST00000389386 TCP11X1B4DZS4 312 aa15.87■□□□□ 0.13
VPS9D1-201ENST00000389386 PEX11AO75192 247 aa15.87■□□□□ 0.13
VPS9D1-201ENST00000389386 FGFR1OPO95684 399 aaKnown RBP15.87■□□□□ 0.13
VPS9D1-201ENST00000389386 PYGBP11216 843 aa15.87■□□□□ 0.13
VPS9D1-201ENST00000389386 SKIV2L2P42285 1042 aaKnown RBP15.87■□□□□ 0.13
VPS9D1-201ENST00000389386 ATL2Q8NHH9 583 aa15.87■□□□□ 0.13
VPS9D1-201ENST00000389386 PRKAG3Q9UGI9 489 aa15.87■□□□□ 0.13
VPS9D1-201ENST00000389386 FAM205AQ6ZU69 1335 aa15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 TPBGLP0DKB5 382 aa15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 GNAT2P19087 354 aa15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 POLR2FP61218 127 aaKnown RBP15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 TNFAIP8L3Q5GJ75 292 aa15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 IFIT1BQ5T764 474 aaKnown RBP15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 C1QTNF12Q5T7M4 302 aa15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 RNF220Q5VTB9 566 aa15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 OR52E8Q6IFG1 317 aa15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 LRRC55Q6ZSA7 311 aa15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 STK32AQ8WU08 396 aa15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 IFT43Q96FT9 208 aa15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 RAB3IPQ96QF0 476 aaPredicted RBP15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 UBR3Q6ZT12 1888 aa15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 PLSCR1O15162 318 aa15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 NMT2O60551 498 aa15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 MECOMQ03112 1051 aa15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 ARID5AQ03989 594 aa15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 KLRC3Q07444 240 aa15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 SLC29A2Q14542 456 aa15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 TRIM7Q9C029 511 aa15.86■□□□□ 0.13
VPS9D1-201ENST00000389386 SCN7AQ01118 1682 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 USP17L12C9JPN9 530 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 USP17L21D6R901 530 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 BAG3O95817 575 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 CALM1P0DP23 149 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 CALM2P0DP24 149 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 CALM3P0DP25 149 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 CYP2D6P10635 497 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 ACADSP16219 412 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 RFC5P40937 340 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 KLHL30Q0D2K2 578 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 DUPD1Q68J44 220 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 KIFAP3Q92845 792 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 TMEM109Q9BVC6 243 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 TANGO6Q9C0B7 1094 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 GOPCQ9HD26 462 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 CYP39A1Q9NYL5 469 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 CASZ1Q86V15 1759 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 UNC5CO95185 931 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 HIBADHP31937 336 aaKnown RBP15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 MTA1Q13330 715 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 PFKFB3Q16875 520 aaPredicted RBP15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 PARP6Q2NL67 630 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 CABP7Q86V35 215 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 BLIDQ8IZY5 108 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 PIGOQ8TEQ8 1089 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 RMDN2Q96LZ7 410 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 ETNK1Q9HBU6 452 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 AIPL1Q9NZN9 384 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 DLGAP2Q9P1A6 1054 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 CNOT7Q9UIV1 285 aaKnown RBP15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 STXBP5LQ9Y2K9 1186 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 UTRNP46939 3433 aa15.85■□□□□ 0.13
VPS9D1-201ENST00000389386 POLE2P56282 527 aa15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 ENOX2Q16206 610 aaKnown RBP15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 DEFB132Q7Z7B7 95 aa15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 ANKLE1Q8NAG6 615 aa15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 ASAP3Q8TDY4 903 aa15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 LSM14BQ9BX40 385 aaKnown RBP15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 CTNNAL1Q9UBT7 734 aa15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 NR2E1Q9Y466 385 aa15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 GM2AP17900 193 aa15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 RAPGEF1Q13905 1077 aa15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 LRRC23Q53EV4 343 aaPredicted RBP15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 FAM47AQ5JRC9 791 aa15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 SLC10A5Q5PT55 438 aa15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 C10orf76Q5T2E6 689 aa15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 CROCCP2Q86T23 111 aa15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 ENDOVQ8N8Q3 282 aaKnown RBP15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 TPCN2Q8NHX9 752 aa15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 FAM136AQ96C01 138 aa15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 ERP44Q9BS26 406 aa15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 NYXQ9GZU5 481 aa15.84■□□□□ 0.13
VPS9D1-201ENST00000389386 CALML3P27482 149 aa15.83■□□□□ 0.13
VPS9D1-201ENST00000389386 GNAQP50148 359 aa15.83■□□□□ 0.13
VPS9D1-201ENST00000389386 USP4Q13107 963 aa15.83■□□□□ 0.13
VPS9D1-201ENST00000389386 LRRC14Q15048 493 aa15.83■□□□□ 0.13
VPS9D1-201ENST00000389386 UBAP2Q5T6F2 1119 aaKnown RBP15.83■□□□□ 0.13
VPS9D1-201ENST00000389386 FBXO33Q7Z6M2 555 aa15.83■□□□□ 0.13
VPS9D1-201ENST00000389386 SLFN11Q7Z7L1 901 aa15.83■□□□□ 0.13
VPS9D1-201ENST00000389386 SDCCAG8Q86SQ7 713 aaPredicted RBP15.83■□□□□ 0.13
VPS9D1-201ENST00000389386 DAAM2Q86T65 1068 aa15.83■□□□□ 0.13
VPS9D1-201ENST00000389386 FAM133AQ8N9E0 248 aa15.83■□□□□ 0.13
VPS9D1-201ENST00000389386 PHC3Q8NDX5 983 aa15.83■□□□□ 0.13
VPS9D1-201ENST00000389386 RASGRP4Q8TDF6 673 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms