RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 AIPL1Q9NZN9 384 aa12.75□□□□□ -0.37
RAPGEF3-201ENST00000389212 WRAP73Q9P2S5 460 aaPredicted RBP12.75□□□□□ -0.37
RAPGEF3-201ENST00000389212 GREB1LQ9C091 1923 aaPredicted RBP12.75□□□□□ -0.37
RAPGEF3-201ENST00000389212 NRXN2Q9P2S2 1712 aa12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 GOLGA6CA6NDK9 693 aa12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 EIF4E1BA6NMX2 242 aaKnown RBP12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 FAM13AO94988 1023 aa12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 GOLGA6DP0CG33 693 aa12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 TRIM49P0CI25 452 aa12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 TRIM49CP0CI26 452 aa12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 SH2D3CQ8N5H7 860 aa12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 RNF10Q8N5U6 811 aaKnown RBP12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 AP1M1Q9BXS5 423 aa12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 GOLGA6AQ9NYA3 693 aa12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 COL11A2P13942 1736 aaPredicted RBP12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 TGFB1I1O43294 461 aa12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 CALUO43852 315 aaPredicted RBP12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 MYBL1P10243 752 aa12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 ALKBH5Q6P6C2 394 aaKnown RBP12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 EPM2AIP1Q7L775 607 aaPredicted RBP12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 SYN2Q92777 582 aaPredicted RBP12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 SLC35C1Q96A29 364 aa12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 TMEM165Q9HC07 324 aa12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 TRAF3IP3Q9Y228 551 aa12.74□□□□□ -0.37
RAPGEF3-201ENST00000389212 YDJCA8MPS7 323 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 KRT14P02533 472 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 EPHA7Q15375 998 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 MEI1Q5TIA1 1274 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 U2AF1L4Q8WU68 220 aaKnown RBP12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 GLIS2Q9BZE0 524 aaPredicted RBP12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 IGLV3-22A0A075B6J6 115 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 CHUKO15111 745 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 CEP104O60308 925 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 RAD17O75943 681 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 EPB41P11171 864 aaKnown RBP12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 ZNF572Q7Z3I7 529 aaPredicted RBP12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 FRMD5Q7Z6J6 570 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 TRIM74Q86UV6 250 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 TRIM73Q86UV7 250 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 ZC3H3Q8IXZ2 948 aaKnown RBP12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 GMCL1Q96IK5 515 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 SIX2Q9NPC8 291 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 LUC7LQ9NQ29 371 aaKnown RBP12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 TYW1Q9NV66 732 aaKnown RBP12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 QSER1Q2KHR3 1735 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 H0YIN7 160 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 SLITRK3O94933 977 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 ARP10275 920 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 STAT2P52630 851 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 PPP4R3CPQ6ZMV5 832 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 DDX42Q86XP3 938 aaKnown RBP eCLIP12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 GMCL1P1Q8NEA9 526 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 FAM76AQ8TAV0 307 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 FAM20AQ96MK3 541 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 CCDC43Q96MW1 224 aaKnown RBP12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 INPP4AQ96PE3 977 aaPredicted RBP12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 YIPF3Q9GZM5 350 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 SUDS3Q9H7L9 328 aaPredicted RBP12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 NAGPAQ9UK23 515 aa12.73□□□□□ -0.37
RAPGEF3-201ENST00000389212 TISP43B9A030 160 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 PDXKO00764 312 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 RAD51CO43502 376 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 LRRN2O75325 713 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 EYA4O95677 639 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 RWDD2BP57060 319 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 USP4Q13107 963 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 MOXD1Q6UVY6 613 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 CASKIN2Q8WXE0 1202 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 AKT1S1Q96B36 256 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 PCDHGC5Q9Y5F6 944 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 PPIP5K2O43314 1243 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 FOSP01100 380 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 ABCB4P21439 1286 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 ATP1A2P50993 1020 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 EPHB4P54760 987 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 RPS6KA1Q15418 735 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 FOXR2Q6PJQ5 311 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 OTOP1Q7RTM1 612 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 TAF4BQ92750 862 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 ZIM3Q96PE6 472 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 SEPT11Q9NVA2 429 aaKnown RBP12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 SLX4Q8IY92 1834 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 TBX3O15119 743 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 C21orf2O43822 256 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 GAS7O60861 476 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 ADCY2Q08462 1091 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 ARHGAP44Q17R89 818 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 TTMPQ5BVD1 217 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 FAM186BQ8IYM0 893 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 ARL10Q8N8L6 244 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 SPDYE1Q8NFV5 336 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 CCDC26Q8TAB7 109 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 ZNF483Q8TF39 744 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 RUFY1Q96T51 708 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 SERPINA10Q9UK55 444 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 ZBTB21Q9ULJ3 1066 aa12.72□□□□□ -0.37
RAPGEF3-201ENST00000389212 ZMYM2Q9UBW7 1377 aa12.71□□□□□ -0.37
RAPGEF3-201ENST00000389212 DDX3XO00571 662 aaKnown RBP eCLIP12.71□□□□□ -0.37
RAPGEF3-201ENST00000389212 CBWD6Q4V339 395 aa12.71□□□□□ -0.37
RAPGEF3-201ENST00000389212 CBWD3Q5JTY5 395 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms