RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 PFKMP08237 780 aa3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 POU3F3P20264 500 aaPredicted RBP3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 LSP1P33241 339 aa3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 ADCY8P40145 1251 aa3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 GPR15P49685 360 aa3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 MRE11P49959 708 aa3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 ADCY7P51828 1080 aa3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 ADAM17P78536 824 aa3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 NOLC1Q14978 699 aaKnown RBP eCLIP3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 R3HDM1Q15032 1099 aaKnown RBP3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 CCDC178Q5BJE1 867 aa3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 KLHDC10Q6PID8 442 aa3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 GLB1LQ6UWU2 654 aa3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 DDX46Q7L014 1031 aaKnown RBP3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 RASSF3Q86WH2 238 aa3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 CIR1Q86X95 450 aaPredicted RBP3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 OR5AN1Q8NGI8 311 aa3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 RSAD2Q8WXG1 361 aa3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 RTF1Q92541 710 aaKnown RBP3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 RABGGTAQ92696 567 aa3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 GFM2Q969S9 779 aaKnown RBP3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 ZNF496Q96IT1 587 aaPredicted RBP3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 WWC2-AS2Q96NR7 200 aa3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 TUBGCP5Q96RT8 1024 aa3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 NELFAQ9H3P2 528 aa3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 THG1LQ9NWX6 298 aaKnown RBP3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 SAE1Q9UBE0 346 aaPredicted RBP3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 TMPRSS11EQ9UL52 423 aa3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 TESMINQ9Y4I5 508 aa3.34□□□□□ -1.87
RNU6-541P-201ENST00000384709 A0A0A6YYK5 440 aaPredicted RBP3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 NPEPPSL1A6NEC2 478 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 K7ESF4 209 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 MAFGO15525 162 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 MTSS1O43312 755 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 OPHN1O60890 802 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 SEC24DO94855 1032 aaPredicted RBP3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 CLSTN1O94985 981 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 ADRB1P08588 477 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 CR2P20023 1033 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 SOX5P35711 763 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 KCNQ1P51787 676 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 MANFP55145 182 aaKnown RBP3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 RAC3P60763 192 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 ADCY2Q08462 1091 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 ICAM4Q14773 271 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 CDSNQ15517 529 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 GAGE13Q4V321 117 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 TIGD7Q6NT04 549 aaPredicted RBP3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 Q6ZSN1 163 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 FRMD7Q6ZUT3 714 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 LIMS2Q7Z4I7 341 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 CLEC14AQ86T13 490 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 C7orf31Q8N865 590 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 WDR48Q8TAF3 677 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 Q8TCH9 128 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 RPGRQ92834 1020 aaKnown RBP3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 ERCC4Q92889 916 aaPredicted RBP3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 SLC7A6OSQ96CW6 309 aaPredicted RBP3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 LMF1Q96S06 567 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 ORAI2Q96SN7 254 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 PTPN18Q99952 460 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 SOX7Q9BT81 388 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 MYL10Q9BUA6 226 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 KIAA1683Q9H0B3 1180 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 SLKQ9H2G2 1235 aaPredicted RBP3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 SLC6A15Q9H2J7 730 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 SEMA4AQ9H3S1 761 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 IFT22Q9H7X7 185 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 TOMM22Q9NS69 142 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 POLR3BQ9NW08 1133 aaPredicted RBP3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 SMPD4Q9NXE4 827 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 OAZ3Q9UMX2 235 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 APOBEC2Q9Y235 224 aaKnown RBP3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 NUMBLQ9Y6R0 609 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 MYPNQ86TC9 1320 aa3.33□□□□□ -1.88
RNU6-541P-201ENST00000384709 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 C2orf78A6NCI8 922 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 NEMP1O14524 444 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 FOXS1O43638 330 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 BRINP1O60477 761 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 H2AFYO75367 372 aaKnown RBP3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 ULK1O75385 1050 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 RAD17O75943 681 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 RPS19P39019 145 aaKnown RBP3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 MEOX1P50221 254 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 STAT5BP51692 787 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 SART3Q15020 963 aaKnown RBP3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 ZBTB41Q5SVQ8 909 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 TCTN3Q6NUS6 607 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 MAMDC4Q6UXC1 1216 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 UNQ6494/PRO21346Q6UXR6 183 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 ESPNLQ6ZVH7 1005 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 OTOP2Q7RTS6 562 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 FILIP1Q7Z7B0 1213 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 STRA8Q7Z7C7 330 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 CXorf67Q86X51 503 aaPredicted RBP3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 LYSMD2Q8IV50 215 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 CHAC2Q8WUX2 184 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 LEO1Q8WVC0 666 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms