RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 USP17L13C9JLJ4 530 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 USP17L12C9JPN9 530 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 USP17L11C9JVI0 530 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 USP17L21D6R901 530 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 USP17L18D6R9N7 530 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 USP17L22D6RA61 530 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 USP17L17D6RBQ6 530 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 USP17L19D6RCP7 530 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 USP17L20D6RJB6 530 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 KRIT1O00522 736 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 CETN3O15182 167 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 GRIN3BO60391 1043 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 KRT5P13647 590 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 TNFAIP3P21580 790 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 LIFRP42702 1097 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 GNAQP50148 359 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 CDK17Q00537 523 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 USP17L24Q0WX57 530 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 NR6A1Q15406 480 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 PLEKHG6Q3KR16 790 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 DPY19L2Q6NUT2 758 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 ANGPTL8Q6UXH0 198 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 RRAGAQ7L523 313 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 MIER3Q7Z3K6 550 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 FUKQ8N0W3 1084 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 SH3TC2Q8TF17 1288 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 KAT2BQ92831 832 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 ARHGEF2Q92974 986 aaKnown RBP6.13□□□□□ -1.43
RFC1-202ENST00000381897 DNAJC7Q99615 494 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 EFHD1Q9BUP0 239 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 BLZF1Q9H2G9 400 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 ITGB1BP2Q9UKP3 347 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 PNMA3Q9UL41 463 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 KCNJ14Q9UNX9 436 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 SETD1BQ9UPS6 1966 aaKnown RBP6.13□□□□□ -1.43
RFC1-202ENST00000381897 TMEM2Q9UHN6 1383 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 MGEA5O60502 916 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 CIAO1O76071 339 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 SLC5A1P13866 664 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 FDPSP14324 419 aaKnown RBP6.13□□□□□ -1.43
RFC1-202ENST00000381897 ATF4P18848 351 aaPredicted RBP6.13□□□□□ -1.43
RFC1-202ENST00000381897 SLC12A1Q13621 1099 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 UAP1L1Q3KQV9 507 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 CDKAL1Q5VV42 579 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 LIX1LQ8IVB5 337 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 KLHDC4Q8TBB5 520 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 CNOT6LQ96LI5 555 aaKnown RBP6.13□□□□□ -1.43
RFC1-202ENST00000381897 SH3GL2Q99962 352 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 TUBB6Q9BUF5 446 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 IRF2BPLQ9H1B7 796 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 KCNK9Q9NPC2 374 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 DDX28Q9NUL7 540 aaKnown RBP6.13□□□□□ -1.43
RFC1-202ENST00000381897 SH3BGRL2Q9UJC5 107 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 BLOC1S6Q9UL45 172 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 C15orf41Q9Y2V0 281 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 JCADQ9P266 1359 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 TTC26A0AVF1 554 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 KCNK3O14649 394 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 KCNQ3O43525 872 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 RNF8O76064 485 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 MCM7P33993 719 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 ERVK-24P63145 666 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 FAM133BQ5BKY9 247 aaKnown RBP6.13□□□□□ -1.43
RFC1-202ENST00000381897 CCDC80Q76M96 950 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 TTC7BQ86TV6 843 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 EIF1ADQ8N9N8 165 aaKnown RBP6.13□□□□□ -1.43
RFC1-202ENST00000381897 NFATC2IPQ8NCF5 419 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 THOC1Q96FV9 657 aaKnown RBP6.13□□□□□ -1.43
RFC1-202ENST00000381897 RNF26Q9BY78 433 aaPredicted RBP6.13□□□□□ -1.43
RFC1-202ENST00000381897 PCDHGB6Q9Y5F9 930 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 GSTTP1A0A1W2PQM5 241 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 ALG1L2C9J202 215 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 ADSLP30566 484 aaPredicted RBP6.13□□□□□ -1.43
RFC1-202ENST00000381897 AMPD2Q01433 879 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 ACAP1Q15027 740 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 PTPAQ15257 358 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 PEX26Q7Z412 305 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 NECAB2Q7Z6G3 386 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 UNC45BQ8IWX7 931 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 MREGQ8N565 214 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 SLC17A8Q8NDX2 589 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 PRPF31Q8WWY3 499 aaKnown RBP6.13□□□□□ -1.43
RFC1-202ENST00000381897 EDEM3Q9BZQ6 932 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 TMBIM4Q9HC24 238 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 CHCHD3Q9NX63 227 aaKnown RBP6.13□□□□□ -1.43
RFC1-202ENST00000381897 EMC3Q9P0I2 261 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 BZW2Q9Y6E2 419 aaKnown RBP6.13□□□□□ -1.43
RFC1-202ENST00000381897 SPATA31D1Q6ZQQ2 1576 aa6.13□□□□□ -1.43
RFC1-202ENST00000381897 M0R2C6 588 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 ATP9BO43861 1147 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 KDM1AO60341 852 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 CETN2P41208 172 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.12□□□□□ -1.43
RFC1-202ENST00000381897 NEK9Q8TD19 979 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 HSPH1Q92598 858 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 P2RX5Q93086 422 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 INO80BQ9C086 356 aaPredicted RBP6.12□□□□□ -1.43
RFC1-202ENST00000381897 SH2D4AQ9H788 454 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 ZFYVE1Q9HBF4 777 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 ZFATQ9P243 1243 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms