RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 PIGOQ8TEQ8 1089 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 C18orf8Q96DM3 657 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 TMEM237Q96Q45 408 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 RAB3IPQ96QF0 476 aaPredicted RBP16.19■□□□□ 0.18
CTNS-202ENST00000381870 TTC7AQ9ULT0 858 aaPredicted RBP16.19■□□□□ 0.18
CTNS-202ENST00000381870 CICQ96RK0 1608 aaPredicted RBP16.19■□□□□ 0.18
CTNS-202ENST00000381870 H0Y3Z8 333 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 CNGA1P29973 690 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 PEX5P50542 639 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 COASYQ13057 564 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 LBRQ14739 615 aaKnown RBP16.19■□□□□ 0.18
CTNS-202ENST00000381870 DPY19L2P1Q6NXN4 242 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 VSTM1Q6UX27 236 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 SYCE1Q8N0S2 351 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 PHC3Q8NDX5 983 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 STK32AQ8WU08 396 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 ZFAND2BQ8WV99 257 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 RAD54LQ92698 747 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 CPVLQ9H3G5 476 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 CYP39A1Q9NYL5 469 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 RGL1Q9NZL6 768 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 DLGAP2Q9P1A6 1054 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 STK17AQ9UEE5 414 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 MAD2L2Q9UI95 211 aa16.19■□□□□ 0.18
CTNS-202ENST00000381870 POTEMA6NI47 508 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 ERVV-2B6SEH9 535 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 PCP11498 1178 aaKnown RBP16.18■□□□□ 0.18
CTNS-202ENST00000381870 KRT13P13646 458 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 UCHL3P15374 230 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 MAPK7Q13164 816 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 NONOQ15233 471 aaKnown RBP eCLIP16.18■□□□□ 0.18
CTNS-202ENST00000381870 BTNL9Q6UXG8 535 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 LONP2Q86WA8 852 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 PNMA1Q8ND90 353 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 B4GALNT2Q8NHY0 566 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 ZNF384Q8TF68 577 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 U2AF1L4Q8WU68 220 aaKnown RBP16.18■□□□□ 0.18
CTNS-202ENST00000381870 DDX23Q9BUQ8 820 aaKnown RBP16.18■□□□□ 0.18
CTNS-202ENST00000381870 TMEM109Q9BVC6 243 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 STMN4Q9H169 189 aaPredicted RBP16.18■□□□□ 0.18
CTNS-202ENST00000381870 AJAP1Q9UKB5 411 aaPredicted RBP16.18■□□□□ 0.18
CTNS-202ENST00000381870 NENFQ9UMX5 172 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 MYH3P11055 1940 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 FAM187AA6NFU0 413 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 DDX3XO00571 662 aaKnown RBP eCLIP16.18■□□□□ 0.18
CTNS-202ENST00000381870 KLC1Q07866 573 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 SGSM1Q2NKQ1 1148 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 NEK8Q86SG6 692 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 SUPT20HQ8NEM7 779 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 UCMAQ8WVF2 138 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 ARHGEF2Q92974 986 aaKnown RBP16.18■□□□□ 0.18
CTNS-202ENST00000381870 KCNK9Q9NPC2 374 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 RREB1Q92766 1687 aa16.18■□□□□ 0.18
CTNS-202ENST00000381870 ABLIM1O14639 778 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 PTDSS1P48651 473 aaKnown RBP16.17■□□□□ 0.18
CTNS-202ENST00000381870 POLE2P56282 527 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 MPP2Q14168 576 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 RPUSD2Q8IZ73 545 aaKnown RBP16.17■□□□□ 0.18
CTNS-202ENST00000381870 FAM13CQ8NE31 585 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 TBCKQ8TEA7 893 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 CKAP2Q8WWK9 683 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 CEP63Q96MT8 703 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 NUDCD1Q96RS6 583 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 GORASP1Q9BQQ3 440 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 TRIM4Q9C037 500 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 KLHL14Q9P2G3 628 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 WTIPA6NIX2 430 aaPredicted RBP16.17■□□□□ 0.18
CTNS-202ENST00000381870 TOM1O60784 492 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 PLCG2P16885 1265 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 SKIV2L2P42285 1042 aaKnown RBP16.17■□□□□ 0.18
CTNS-202ENST00000381870 PTGIRP43119 386 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 GALCP54803 685 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 GALNT17Q6IS24 598 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 CCDC25Q86WR0 208 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 TTC8Q8TAM2 541 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 ASAP3Q8TDY4 903 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 FAM210AQ96ND0 272 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 TGS1Q96RS0 853 aaKnown RBP16.17■□□□□ 0.18
CTNS-202ENST00000381870 MYLK2Q9H1R3 596 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 CTNNAL1Q9UBT7 734 aa16.17■□□□□ 0.18
CTNS-202ENST00000381870 BZW2Q9Y6E2 419 aaKnown RBP16.17■□□□□ 0.18
CTNS-202ENST00000381870 A0A0A6YYK5 440 aaPredicted RBP16.16■□□□□ 0.18
CTNS-202ENST00000381870 AFPP02771 609 aaKnown RBP16.16■□□□□ 0.18
CTNS-202ENST00000381870 GOLGA8HP0CJ92 632 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 TARSP26639 723 aaKnown RBP16.16■□□□□ 0.18
CTNS-202ENST00000381870 NAPAP54920 295 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 CACNB1Q02641 598 aaPredicted RBP16.16■□□□□ 0.18
CTNS-202ENST00000381870 DHX34Q14147 1143 aaKnown RBP16.16■□□□□ 0.18
CTNS-202ENST00000381870 ECM1Q16610 540 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 FAM26FQ5R3K3 315 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 MFSD5Q6N075 450 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 SLC35G2Q8TBE7 412 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 DNAJC9Q8WXX5 260 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 DNAJC19Q96DA6 116 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 IL17RBQ9NRM6 502 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 PCMTD2Q9NV79 361 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 HAO1Q9UJM8 370 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 PFASO15067 1338 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 IGSF9BQ9UPX0 1349 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 ANKRD63C9JTQ0 380 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms