RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 LARP4BQ92615 738 aaKnown RBP15.01□□□□□ -0.01
SDC1-202ENST00000381150 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.01□□□□□ -0.01
SDC1-202ENST00000381150 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.01□□□□□ -0.012e-7■■■■□ 20.1
SDC1-202ENST00000381150 AGAP1Q9UPQ3 857 aa15.01□□□□□ -0.01
SDC1-202ENST00000381150 SLC37A4O43826 429 aa15.01□□□□□ -0.01
SDC1-202ENST00000381150 MGRN1O60291 552 aa15.01□□□□□ -0.01
SDC1-202ENST00000381150 ALDH5A1P51649 535 aaPredicted RBP15.01□□□□□ -0.01
SDC1-202ENST00000381150 NFIAQ12857 509 aa15.01□□□□□ -0.01
SDC1-202ENST00000381150 TAF11Q15544 211 aa15.01□□□□□ -0.01
SDC1-202ENST00000381150 HERC4Q5GLZ8 1057 aaPredicted RBP15.01□□□□□ -0.01
SDC1-202ENST00000381150 ADGRF4Q8IZF3 695 aa15.01□□□□□ -0.01
SDC1-202ENST00000381150 DNAJC18Q9H819 358 aa15.01□□□□□ -0.01
SDC1-202ENST00000381150 BLOC1S4Q9NUP1 217 aa15.01□□□□□ -0.01
SDC1-202ENST00000381150 FGFR1OP2Q9NVK5 253 aa15.01□□□□□ -0.01
SDC1-202ENST00000381150 NR2E1Q9Y466 385 aa15.01□□□□□ -0.01
SDC1-202ENST00000381150 COL4A3BPQ9Y5P4 624 aa15.01□□□□□ -0.01
SDC1-202ENST00000381150 SESN3P58005 492 aa15□□□□□ -0.01
SDC1-202ENST00000381150 TTBK2Q6IQ55 1244 aa15□□□□□ -0.01
SDC1-202ENST00000381150 ZNF572Q7Z3I7 529 aaPredicted RBP15□□□□□ -0.01
SDC1-202ENST00000381150 TMC3Q7Z5M5 1100 aa15□□□□□ -0.01
SDC1-202ENST00000381150 HOOK3Q86VS8 718 aa15□□□□□ -0.01
SDC1-202ENST00000381150 MYOCDQ8IZQ8 938 aa15□□□□□ -0.01
SDC1-202ENST00000381150 GPCPD1Q9NPB8 672 aa15□□□□□ -0.01
SDC1-202ENST00000381150 CHORDC1Q9UHD1 332 aaPredicted RBP15□□□□□ -0.01
SDC1-202ENST00000381150 F8VZ95 297 aa15□□□□□ -0.01
SDC1-202ENST00000381150 LGR5O75473 907 aa15□□□□□ -0.01
SDC1-202ENST00000381150 SLC9A1P19634 815 aa15□□□□□ -0.01
SDC1-202ENST00000381150 TNNI2P48788 182 aa15□□□□□ -0.01
SDC1-202ENST00000381150 FXR2P51116 673 aaKnown RBP eCLIP15□□□□□ -0.01
SDC1-202ENST00000381150 GRB10Q13322 594 aa15□□□□□ -0.01
SDC1-202ENST00000381150 SLC29A2Q14542 456 aa15□□□□□ -0.01
SDC1-202ENST00000381150 LRIG3Q6UXM1 1119 aa15□□□□□ -0.01
SDC1-202ENST00000381150 PNMA5Q96PV4 448 aa15□□□□□ -0.01
SDC1-202ENST00000381150 PNMA6FA0A0J9YX94 578 aa15□□□□□ -0.01
SDC1-202ENST00000381150 NPHP3-ACAD11A0A0J9YXS1 232 aa15□□□□□ -0.01
SDC1-202ENST00000381150 H0YGN5 161 aa15□□□□□ -0.01
SDC1-202ENST00000381150 ALDH1B1P30837 517 aa15□□□□□ -0.01
SDC1-202ENST00000381150 IRX1P78414 480 aaPredicted RBP15□□□□□ -0.01
SDC1-202ENST00000381150 ARMC3Q5W041 872 aa15□□□□□ -0.01
SDC1-202ENST00000381150 CENPPQ6IPU0 288 aa15□□□□□ -0.01
SDC1-202ENST00000381150 EPS8L3Q8TE67 593 aaKnown RBP15□□□□□ -0.01
SDC1-202ENST00000381150 CALR3Q96L12 384 aaKnown RBP15□□□□□ -0.01
SDC1-202ENST00000381150 BUD13Q9BRD0 619 aaKnown RBP eCLIP15□□□□□ -0.01
SDC1-202ENST00000381150 NFS1Q9Y697 457 aa15□□□□□ -0.01
SDC1-202ENST00000381150 MYH7BA7E2Y1 1941 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 SCN9AQ15858 1988 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 SSU72P8A0A1W2PR75 194 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 TDP2O95551 362 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 COBLL1Q53SF7 1204 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 HOOK2Q96ED9 719 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 NUDT12Q9BQG2 462 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 PPP1R12CQ9BZL4 782 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 RIC8AQ9NPQ8 531 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 CEP72Q9P209 647 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 TBK1Q9UHD2 729 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 PNMA3Q9UL41 463 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 PCDHAC2Q9Y5I4 1007 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 TCP11X1B4DZS4 312 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 PJA2O43164 708 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 PPIP5K2O43314 1243 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 ECHS1P30084 290 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 ADCY7P51828 1080 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 LACTBP83111 547 aaPredicted RBP14.99□□□□□ -0.01
SDC1-202ENST00000381150 CALCRLQ16602 461 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 KRT79Q5XKE5 535 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 GJB7Q6PEY0 223 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 FAM129AQ9BZQ8 928 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 ZCWPW1Q9H0M4 648 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 KDM4CQ9H3R0 1056 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 TMOD4Q9NZQ9 345 aa14.99□□□□□ -0.01
SDC1-202ENST00000381150 SMIM24O75264 130 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 HNRNPH3P31942 346 aaKnown RBP14.98□□□□□ -0.01
SDC1-202ENST00000381150 ATP11AP98196 1134 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 FKBP3Q00688 224 aaKnown RBP14.98□□□□□ -0.01
SDC1-202ENST00000381150 RNASELQ05823 741 aaKnown RBP14.98□□□□□ -0.01
SDC1-202ENST00000381150 ADAM9Q13443 819 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 UBAP2Q5T6F2 1119 aaKnown RBP14.98□□□□□ -0.01
SDC1-202ENST00000381150 ARMC9Q7Z3E5 817 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 ZNF483Q8TF39 744 aaPredicted RBP14.98□□□□□ -0.01
SDC1-202ENST00000381150 PAGR1Q9BTK6 254 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 NSRP1Q9H0G5 558 aaKnown RBP14.98□□□□□ -0.01
SDC1-202ENST00000381150 BMP2KQ9NSY1 1161 aaPredicted RBP14.98□□□□□ -0.01
SDC1-202ENST00000381150 GOLGA6L10A0A0M3HER8 536 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 PLSCR1O15162 318 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 PDIA5Q14554 519 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 TMEM266Q2M3C6 531 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 AADACL2Q6P093 401 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 FAM47EQ6ZV65 393 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 NEK9Q8TD19 979 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 TEKT1Q969V4 418 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 MASTLQ96GX5 879 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 ZDHHC15Q96MV8 337 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 MRIQ9BWK5 157 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 OSGEPQ9NPF4 335 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 BCS1LQ9Y276 419 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 ACSL3O95573 720 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 ERMARDQ5T6L9 678 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 TLDC1Q6P9B6 456 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 FBXO25Q8TCJ0 367 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 ZNF570Q96NI8 536 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms