RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 AGPAT3Q9NRZ7 376 aa18.78■□□□□ 0.6
PDX1-201ENST00000381033 CD2APQ9Y5K6 639 aa18.78■□□□□ 0.6
PDX1-201ENST00000381033 MRPS25P82663 173 aaKnown RBP18.78■□□□□ 0.6
PDX1-201ENST00000381033 PTK2Q05397 1052 aa18.78■□□□□ 0.6
PDX1-201ENST00000381033 CBWD6Q4V339 395 aa18.78■□□□□ 0.6
PDX1-201ENST00000381033 CBWD3Q5JTY5 395 aa18.78■□□□□ 0.6
PDX1-201ENST00000381033 CBWD5Q5RIA9 395 aa18.78■□□□□ 0.6
PDX1-201ENST00000381033 FAM186BQ8IYM0 893 aa18.78■□□□□ 0.6
PDX1-201ENST00000381033 COG1Q8WTW3 980 aa18.78■□□□□ 0.6
PDX1-201ENST00000381033 KLRG1Q96E93 195 aa18.78■□□□□ 0.6
PDX1-201ENST00000381033 GCNT4Q9P109 453 aa18.78■□□□□ 0.6
PDX1-201ENST00000381033 ZNF112Q9UJU3 913 aa18.78■□□□□ 0.6
PDX1-201ENST00000381033 ZNF214Q9UL59 606 aaPredicted RBP18.78■□□□□ 0.6
PDX1-201ENST00000381033 DOCK5Q9H7D0 1870 aa18.78■□□□□ 0.6
PDX1-201ENST00000381033 CCDC189A1A4V9 331 aa18.77■□□□□ 0.6
PDX1-201ENST00000381033 BACH1O14867 736 aa18.77■□□□□ 0.6
PDX1-201ENST00000381033 SERPING1P05155 500 aa18.77■□□□□ 0.6
PDX1-201ENST00000381033 RPL13P26373 211 aaKnown RBP18.77■□□□□ 0.6
PDX1-201ENST00000381033 YWHABP31946 246 aaKnown RBP18.77■□□□□ 0.6
PDX1-201ENST00000381033 DNA2P51530 1060 aa18.77■□□□□ 0.6
PDX1-201ENST00000381033 KLHL30Q0D2K2 578 aa18.77■□□□□ 0.6
PDX1-201ENST00000381033 WHAMMP3Q1A5X7 153 aa18.77■□□□□ 0.6
PDX1-201ENST00000381033 REPS2Q8NFH8 660 aa18.77■□□□□ 0.6
PDX1-201ENST00000381033 CENPFP49454 3210 aa18.77■□□□□ 0.6
PDX1-201ENST00000381033 RLFQ13129 1914 aa18.77■□□□□ 0.6
PDX1-201ENST00000381033 K7ENM7 598 aa18.77■□□□□ 0.6
PDX1-201ENST00000381033 EIF3DO15371 548 aaKnown RBP eCLIP18.77■□□□□ 0.6
PDX1-201ENST00000381033 RGS20O76081 388 aa18.77■□□□□ 0.6
PDX1-201ENST00000381033 QARSP47897 775 aaKnown RBP18.77■□□□□ 0.6
PDX1-201ENST00000381033 DLG4P78352 724 aa18.77■□□□□ 0.6
PDX1-201ENST00000381033 FSTL1Q12841 308 aa18.77■□□□□ 0.6
PDX1-201ENST00000381033 ARHGAP27Q6ZUM4 889 aa18.77■□□□□ 0.6
PDX1-201ENST00000381033 IRF2BP2Q7Z5L9 587 aa18.77■□□□□ 0.6
PDX1-201ENST00000381033 KIFC3Q9BVG8 833 aa18.77■□□□□ 0.6
PDX1-201ENST00000381033 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.77■□□□□ 0.6
PDX1-201ENST00000381033 GPRC5DQ9NZD1 345 aa18.77■□□□□ 0.6
PDX1-201ENST00000381033 PARP14Q460N5 1801 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 TBC1D8O95759 1140 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 USP14P54578 494 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 GHRHRQ02643 423 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 DCAF15Q66K64 600 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 NFRKBQ6P4R8 1299 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 ZNF571Q7Z3V5 609 aaPredicted RBP18.76■□□□□ 0.59
PDX1-201ENST00000381033 ANKRD23Q86SG2 305 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 SYCP3Q8IZU3 236 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 SPAG5Q96R06 1193 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 EDEM3Q9BZQ6 932 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 GBP3Q9H0R5 595 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 FAM53CQ9NYF3 392 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 SSC5DA1L4H1 1573 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 SSU72P8A0A1W2PR75 194 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 ZMYND10O75800 440 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 KLRC1P26715 233 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 NAP1L1P55209 391 aaKnown RBP18.76■□□□□ 0.59
PDX1-201ENST00000381033 VSNL1P62760 191 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 PTPROQ16827 1216 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 ARGLU1Q9NWB6 273 aaPredicted RBP18.76■□□□□ 0.59
PDX1-201ENST00000381033 ODF2LQ9ULJ1 636 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 LTBP3Q9NS15 1303 aa18.76■□□□□ 0.59
PDX1-201ENST00000381033 DOCK1Q14185 1865 aa18.75■□□□□ 0.59
PDX1-201ENST00000381033 PPP1R37O75864 691 aa18.75■□□□□ 0.59
PDX1-201ENST00000381033 NR3C2P08235 984 aa18.75■□□□□ 0.59
PDX1-201ENST00000381033 PSMC2P35998 433 aaKnown RBP18.75■□□□□ 0.59
PDX1-201ENST00000381033 PLA2G4AP47712 749 aa18.75■□□□□ 0.59
PDX1-201ENST00000381033 CBWD1Q9BRT8 395 aa18.75■□□□□ 0.59
PDX1-201ENST00000381033 STRA6Q9BX79 667 aa18.75■□□□□ 0.59
PDX1-201ENST00000381033 GOLPH3Q9H4A6 298 aa18.75■□□□□ 0.59
PDX1-201ENST00000381033 AIPL1Q9NZN9 384 aa18.75■□□□□ 0.59
PDX1-201ENST00000381033 DDNO94850 711 aaPredicted RBP18.75■□□□□ 0.59
PDX1-201ENST00000381033 ASIC2Q16515 512 aa18.75■□□□□ 0.59
PDX1-201ENST00000381033 MED4Q9NPJ6 270 aa18.75■□□□□ 0.59
PDX1-201ENST00000381033 PACSIN2Q9UNF0 486 aaPredicted RBP18.75■□□□□ 0.59
PDX1-201ENST00000381033 SLC16A4O15374 487 aa18.74■□□□□ 0.59
PDX1-201ENST00000381033 DSG3P32926 999 aa18.74■□□□□ 0.59
PDX1-201ENST00000381033 IQCEQ6IPM2 695 aa18.74■□□□□ 0.59
PDX1-201ENST00000381033 KIAA1217Q5T5P2 1943 aa18.74■□□□□ 0.59
PDX1-201ENST00000381033 PEX3P56589 373 aa18.74■□□□□ 0.59
PDX1-201ENST00000381033 SLC18A3Q16572 532 aa18.74■□□□□ 0.59
PDX1-201ENST00000381033 GBP6Q6ZN66 633 aa18.74■□□□□ 0.59
PDX1-201ENST00000381033 ANO5Q75V66 913 aa18.74■□□□□ 0.59
PDX1-201ENST00000381033 HS2ST1Q7LGA3 356 aa18.74■□□□□ 0.59
PDX1-201ENST00000381033 NIPA1Q7RTP0 329 aa18.74■□□□□ 0.59
PDX1-201ENST00000381033 VSIG10LQ86VR7 867 aa18.74■□□□□ 0.59
PDX1-201ENST00000381033 KCTD17Q8N5Z5 321 aa18.74■□□□□ 0.59
PDX1-201ENST00000381033 EHBP1Q8NDI1 1231 aa18.74■□□□□ 0.59
PDX1-201ENST00000381033 TSGA10Q9BZW7 698 aa18.74■□□□□ 0.59
PDX1-201ENST00000381033 R3HDMLQ9H3Y0 253 aa18.74■□□□□ 0.59
PDX1-201ENST00000381033 METTL14Q9HCE5 456 aaKnown RBP18.74■□□□□ 0.59
PDX1-201ENST00000381033 DMAC2Q9NW81 257 aa18.74■□□□□ 0.59
PDX1-201ENST00000381033 SLC16A3O15427 465 aaKnown RBP18.73■□□□□ 0.59
PDX1-201ENST00000381033 EXOC3O60645 756 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 MUTP22033 750 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 C2orf54Q08AI8 447 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 KIAA0753Q2KHM9 967 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 ZC3H12AQ5D1E8 599 aaKnown RBP18.73■□□□□ 0.59
PDX1-201ENST00000381033 XKR9Q5GH70 373 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 TRIM58Q8NG06 486 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 SYN2Q92777 582 aaPredicted RBP18.73■□□□□ 0.59
PDX1-201ENST00000381033 ELMO3Q96BJ8 720 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 A1CFQ9NQ94 594 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms