RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 U2AF1L4Q8WU68 220 aaKnown RBP17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 RUSC1Q9BVN2 902 aa17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 PLCB1Q9NQ66 1216 aa17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 HMGB1P1B2RPK0 211 aaPredicted RBP17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 ENTPD3O75355 529 aa17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 FNTAP49354 379 aa17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 CNOT8Q9UFF9 292 aaKnown RBP17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 BCS1LQ9Y276 419 aa17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 ASTN1O14525 1302 aa17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 GCOM1H8Y6P7 765 aaPredicted RBP17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 MYZAPP0CAP1 466 aa17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 SPRED3Q2MJR0 410 aa17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 ETNPPLQ8TBG4 499 aa17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 ACTRT1Q8TDG2 376 aa17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 DYDC2Q96IM9 177 aa17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 EIF2AK1Q9BQI3 630 aaKnown RBP17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 TRIM51Q9BSJ1 452 aa17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 GLT8D2Q9H1C3 349 aa17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 TBCAO75347 108 aaKnown RBP17.68■□□□□ 0.42
NKX3-1-201ENST00000380871 AP3B2Q13367 1082 aa17.68■□□□□ 0.42
NKX3-1-201ENST00000380871 QPCTQ16769 361 aa17.68■□□□□ 0.42
NKX3-1-201ENST00000380871 LRCH2Q5VUJ6 765 aa17.68■□□□□ 0.42
NKX3-1-201ENST00000380871 SLC35C1Q96A29 364 aa17.68■□□□□ 0.42
NKX3-1-201ENST00000380871 GOLGA6L10A6NI86 522 aa17.68■□□□□ 0.42
NKX3-1-201ENST00000380871 H0YHG0 523 aa17.68■□□□□ 0.42
NKX3-1-201ENST00000380871 NR3C1P04150 777 aa17.68■□□□□ 0.42
NKX3-1-201ENST00000380871 GUCY2CP25092 1073 aa17.68■□□□□ 0.42
NKX3-1-201ENST00000380871 RDH13Q8NBN7 331 aa17.68■□□□□ 0.42
NKX3-1-201ENST00000380871 LENG9Q96B70 501 aa17.68■□□□□ 0.42
NKX3-1-201ENST00000380871 GMCL1Q96IK5 515 aa17.68■□□□□ 0.42
NKX3-1-201ENST00000380871 IGSF9BQ9UPX0 1349 aa17.68■□□□□ 0.42
NKX3-1-201ENST00000380871 ABCB4P21439 1286 aa17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 ZC2HC1CQ53FD0 456 aaPredicted RBP17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 MYCT1Q8N699 235 aa17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 AGBL1Q96MI9 1066 aa17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 TRAF3IP3Q9Y228 551 aa17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 RABGAP1Q9Y3P9 1069 aa17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 POLR2MP0CAP2 368 aa17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 NMT1P30419 496 aaKnown RBP17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 SF3A3Q12874 501 aaKnown RBP eCLIP17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 FRMD5Q7Z6J6 570 aa17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 GLYCTKQ8IVS8 523 aa17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 GMCL1P1Q8NEA9 526 aa17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 SUPT20HQ8NEM7 779 aa17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 LNX1Q8TBB1 728 aaPredicted RBP17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 NAP1L4Q99733 375 aaKnown RBP17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 ATAD5Q96QE3 1844 aa17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 BTNL10A8MVZ5 291 aa17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 EMC10Q5UCC4 262 aa17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 EPM2AIP1Q7L775 607 aaPredicted RBP17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 SUGP1Q8IWZ8 645 aaKnown RBP17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 OLIG1Q8TAK6 271 aa17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 CYFIP2Q96F07 1278 aa17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 PBKQ96KB5 322 aa17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 WDR18Q9BV38 432 aa17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 SLC12A6Q9UHW9 1150 aa17.67■□□□□ 0.42
NKX3-1-201ENST00000380871 FLOT1O75955 427 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 FAM107AO95990 144 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 SREBF1P36956 1147 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 MNAT1P51948 309 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 COG2Q14746 738 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 ODF2Q5BJF6 829 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 PPP4R3CPQ6ZMV5 832 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 NT5DC3Q86UY8 548 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 CNPY4Q8N129 248 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 PRPF38AQ8NAV1 312 aaKnown RBP17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 MRIQ9BWK5 157 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 NOVA2Q9UNW9 492 aaKnown RBP17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 FZD1Q9UP38 647 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 GAS7O60861 476 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 FAM13AO94988 1023 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 FOSP01100 380 aaPredicted RBP17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 H2AFZP0C0S5 128 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 ARP10275 920 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 GALCP54803 685 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 JAM2P57087 298 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 PRPF4BQ13523 1007 aaKnown RBP17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 CUL1Q13616 776 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 DCAF12L1Q5VU92 463 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 PRAMEF18Q5VWM3 479 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 H2AFVQ71UI9 128 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 BANK1Q8NDB2 785 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 ZNF341Q9BYN7 854 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 GOPCQ9HD26 462 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 PPP1R9AQ9ULJ8 1098 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 NENFQ9UMX5 172 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 STXBP5LQ9Y2K9 1186 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 COL11A2P13942 1736 aaPredicted RBP17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 PITPNM2Q9BZ72 1349 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 BUB1BO60566 1050 aaPredicted RBP17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 FGGP02679 453 aa17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 HMGB2P26583 209 aaKnown RBP17.66■□□□□ 0.42
NKX3-1-201ENST00000380871 EVI5O60447 810 aa17.65■□□□□ 0.42
NKX3-1-201ENST00000380871 ZBTB7AO95365 584 aa17.65■□□□□ 0.42
NKX3-1-201ENST00000380871 RPA1P27694 616 aa17.65■□□□□ 0.42
NKX3-1-201ENST00000380871 ZNF211Q13398 564 aaPredicted RBP17.65■□□□□ 0.42
NKX3-1-201ENST00000380871 MCTP2Q6DN12 878 aa17.65■□□□□ 0.42
NKX3-1-201ENST00000380871 TMC3Q7Z5M5 1100 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms