RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 PGBD1Q96JS3 809 aa19.75■□□□□ 0.75
HMGN1-203ENST00000380748 LZTS2Q9BRK4 669 aa19.75■□□□□ 0.75
HMGN1-203ENST00000380748 ZBP1Q9H171 429 aa19.75■□□□□ 0.75
HMGN1-203ENST00000380748 R4GN57 208 aa19.75■□□□□ 0.75
HMGN1-203ENST00000380748 RXRAP19793 462 aa19.74■□□□□ 0.75
HMGN1-203ENST00000380748 ATP4AP20648 1035 aa19.74■□□□□ 0.75
HMGN1-203ENST00000380748 BCAR1P56945 870 aa19.74■□□□□ 0.75
HMGN1-203ENST00000380748 FAM160B1Q5W0V3 765 aa19.74■□□□□ 0.75
HMGN1-203ENST00000380748 PDXDC2PQ6P474 469 aa19.74■□□□□ 0.75
HMGN1-203ENST00000380748 TMEM173Q86WV6 379 aaPredicted RBP19.74■□□□□ 0.75
HMGN1-203ENST00000380748 MB21D2Q8IYB1 491 aaPredicted RBP19.74■□□□□ 0.75
HMGN1-203ENST00000380748 VPS52Q8N1B4 723 aa19.74■□□□□ 0.75
HMGN1-203ENST00000380748 METTL13Q8N6R0 699 aa19.74■□□□□ 0.75
HMGN1-203ENST00000380748 SLC22A17Q8WUG5 538 aa19.74■□□□□ 0.75
HMGN1-203ENST00000380748 NARSO43776 548 aaKnown RBP19.73■□□□□ 0.75
HMGN1-203ENST00000380748 KRT37O76014 449 aa19.73■□□□□ 0.75
HMGN1-203ENST00000380748 GNAQP50148 359 aa19.73■□□□□ 0.75
HMGN1-203ENST00000380748 CEP55Q53EZ4 464 aa19.73■□□□□ 0.75
HMGN1-203ENST00000380748 CABP7Q86V35 215 aa19.73■□□□□ 0.75
HMGN1-203ENST00000380748 TMEM87AQ8NBN3 555 aa19.73■□□□□ 0.75
HMGN1-203ENST00000380748 ACSF2Q96CM8 615 aaPredicted RBP19.73■□□□□ 0.75
HMGN1-203ENST00000380748 TMEM169Q96HH4 297 aa19.73■□□□□ 0.75
HMGN1-203ENST00000380748 KCNK12Q9HB15 430 aa19.73■□□□□ 0.75
HMGN1-203ENST00000380748 ZNF302Q9NR11 478 aa19.73■□□□□ 0.75
HMGN1-203ENST00000380748 ZSCAN20P17040 1043 aaPredicted RBP19.72■□□□□ 0.75
HMGN1-203ENST00000380748 CLCN3P51790 818 aa19.72■□□□□ 0.75
HMGN1-203ENST00000380748 NUCB1Q02818 461 aa19.72■□□□□ 0.75
HMGN1-203ENST00000380748 BMS1Q14692 1282 aaKnown RBP19.72■□□□□ 0.75
HMGN1-203ENST00000380748 SWSAP1Q6NVH7 229 aa19.72■□□□□ 0.75
HMGN1-203ENST00000380748 CCDC149Q6ZUS6 474 aa19.72■□□□□ 0.75
HMGN1-203ENST00000380748 OTOP3Q7RTS5 596 aa19.72■□□□□ 0.75
HMGN1-203ENST00000380748 TRMT1LQ7Z2T5 733 aaKnown RBP19.72■□□□□ 0.75
HMGN1-203ENST00000380748 HEATR3Q7Z4Q2 680 aa19.72■□□□□ 0.75
HMGN1-203ENST00000380748 ZNF598Q86UK7 904 aaKnown RBP19.72■□□□□ 0.75
HMGN1-203ENST00000380748 CCDC82Q8N4S0 544 aa19.72■□□□□ 0.75
HMGN1-203ENST00000380748 RIN2Q8WYP3 895 aaPredicted RBP19.72■□□□□ 0.75
HMGN1-203ENST00000380748 SEMA4AQ9H3S1 761 aa19.72■□□□□ 0.75
HMGN1-203ENST00000380748 ALDH7A1P49419 539 aaKnown RBP19.71■□□□□ 0.75
HMGN1-203ENST00000380748 NLRP11P59045 1033 aaKnown RBP19.71■□□□□ 0.75
HMGN1-203ENST00000380748 PUM1Q14671 1186 aaKnown RBP eCLIP19.71■□□□□ 0.751e-6■□□□□ 9.6
HMGN1-203ENST00000380748 GPR149Q86SP6 731 aa19.71■□□□□ 0.75
HMGN1-203ENST00000380748 RAB11FIP4Q86YS3 637 aa19.71■□□□□ 0.75
HMGN1-203ENST00000380748 CKAP2LQ8IYA6 745 aa19.71■□□□□ 0.75
HMGN1-203ENST00000380748 ZNF668Q96K58 619 aaPredicted RBP19.71■□□□□ 0.75
HMGN1-203ENST00000380748 ADAMTS10Q9H324 1103 aa19.71■□□□□ 0.75
HMGN1-203ENST00000380748 SFXN1Q9H9B4 322 aa19.71■□□□□ 0.75
HMGN1-203ENST00000380748 ACACBO00763 2458 aa19.71■□□□□ 0.75
HMGN1-203ENST00000380748 C2orf16Q68DN1 1984 aa19.71■□□□□ 0.75
HMGN1-203ENST00000380748 SPTBN2O15020 2390 aa19.71■□□□□ 0.75
HMGN1-203ENST00000380748 KRBA1A5PL33 1030 aa19.7■□□□□ 0.74
HMGN1-203ENST00000380748 MEIS1O00470 390 aa19.7■□□□□ 0.74
HMGN1-203ENST00000380748 STK25O00506 426 aa19.7■□□□□ 0.74
HMGN1-203ENST00000380748 ZC3H11AO75152 810 aaKnown RBP eCLIP19.7■□□□□ 0.74
HMGN1-203ENST00000380748 CFHP08603 1231 aa19.7■□□□□ 0.74
HMGN1-203ENST00000380748 CTSAP10619 480 aa19.7■□□□□ 0.74
HMGN1-203ENST00000380748 BCL7CQ8WUZ0 217 aaPredicted RBP19.7■□□□□ 0.74
HMGN1-203ENST00000380748 HINFPQ9BQA5 517 aa19.7■□□□□ 0.74
HMGN1-203ENST00000380748 MRPL9Q9BYD2 267 aaKnown RBP19.7■□□□□ 0.74
HMGN1-203ENST00000380748 AKT3Q9Y243 479 aa19.7■□□□□ 0.74
HMGN1-203ENST00000380748 IRAK3Q9Y616 596 aa19.7■□□□□ 0.74
HMGN1-203ENST00000380748 GPR179Q6PRD1 2367 aa19.7■□□□□ 0.74
HMGN1-203ENST00000380748 A0A0U1RQF3 1178 aa19.69■□□□□ 0.74
HMGN1-203ENST00000380748 FGFR4P22455 802 aa19.69■□□□□ 0.74
HMGN1-203ENST00000380748 EIF4BP23588 611 aaKnown RBP19.69■□□□□ 0.74
HMGN1-203ENST00000380748 MIS18BP1Q6P0N0 1132 aa19.69■□□□□ 0.74
HMGN1-203ENST00000380748 NFXL1Q6ZNB6 911 aa19.69■□□□□ 0.74
HMGN1-203ENST00000380748 BBXQ8WY36 941 aaPredicted RBP19.69■□□□□ 0.74
HMGN1-203ENST00000380748 CNTNAP3BQ96NU0 1288 aa19.69■□□□□ 0.74
HMGN1-203ENST00000380748 ANO3Q9BYT9 981 aa19.69■□□□□ 0.74
HMGN1-203ENST00000380748 CNTNAP3Q9BZ76 1288 aa19.69■□□□□ 0.74
HMGN1-203ENST00000380748 SPDYE4A6NLX3 237 aa19.68■□□□□ 0.74
HMGN1-203ENST00000380748 DHX15O43143 795 aaKnown RBP19.68■□□□□ 0.74
HMGN1-203ENST00000380748 POLGP54098 1239 aaPredicted RBP19.68■□□□□ 0.74
HMGN1-203ENST00000380748 GIT2Q14161 759 aa19.68■□□□□ 0.74
HMGN1-203ENST00000380748 WWC2Q6AWC2 1192 aa19.68■□□□□ 0.74
HMGN1-203ENST00000380748 TYW1BQ6NUM6 668 aa19.68■□□□□ 0.74
HMGN1-203ENST00000380748 DDX53Q86TM3 631 aaKnown RBP19.68■□□□□ 0.74
HMGN1-203ENST00000380748 LRRC71Q8N4P6 559 aa19.68■□□□□ 0.74
HMGN1-203ENST00000380748 DCLK2Q8N568 766 aa19.68■□□□□ 0.74
HMGN1-203ENST00000380748 LINC01465Q8N7H1 131 aa19.68■□□□□ 0.74
HMGN1-203ENST00000380748 RSAD2Q8WXG1 361 aa19.68■□□□□ 0.74
HMGN1-203ENST00000380748 IGSF21Q96ID5 467 aa19.68■□□□□ 0.74
HMGN1-203ENST00000380748 DLL3Q9NYJ7 618 aa19.68■□□□□ 0.74
HMGN1-203ENST00000380748 MYH9P35579 1960 aaKnown RBP19.68■□□□□ 0.74
HMGN1-203ENST00000380748 SH2B2O14492 632 aaPredicted RBP19.67■□□□□ 0.74
HMGN1-203ENST00000380748 PRC1O43663 620 aa19.67■□□□□ 0.74
HMGN1-203ENST00000380748 N4BP1O75113 896 aaKnown RBP19.67■□□□□ 0.74
HMGN1-203ENST00000380748 RFX1P22670 979 aa19.67■□□□□ 0.74
HMGN1-203ENST00000380748 COL9A3Q14050 684 aaPredicted RBP19.67■□□□□ 0.74
HMGN1-203ENST00000380748 PTPN14Q15678 1187 aa19.67■□□□□ 0.74
HMGN1-203ENST00000380748 LETM2Q2VYF4 491 aa19.67■□□□□ 0.74
HMGN1-203ENST00000380748 EFCAB12Q6NXP0 572 aa19.67■□□□□ 0.74
HMGN1-203ENST00000380748 CASC1Q6TDU7 716 aa19.67■□□□□ 0.74
HMGN1-203ENST00000380748 TMTC3Q6ZXV5 915 aa19.67■□□□□ 0.74
HMGN1-203ENST00000380748 MAP7D2Q96T17 732 aa19.67■□□□□ 0.74
HMGN1-203ENST00000380748 VN1R3Q9BXE9 311 aa19.67■□□□□ 0.74
HMGN1-203ENST00000380748 IGSF9Q9P2J2 1179 aa19.67■□□□□ 0.74
HMGN1-203ENST00000380748 WNT16Q9UBV4 365 aa19.67■□□□□ 0.74
HMGN1-203ENST00000380748 CA14Q9ULX7 337 aa19.67■□□□□ 0.74
HMGN1-203ENST00000380748 MAFBQ9Y5Q3 323 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms