RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 SSRP1Q08945 709 aaKnown RBP7.09□□□□□ -1.27
RIPK1-202ENST00000380409 ZNF804AQ7Z570 1209 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 NANOGNBQ7Z5D8 188 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 MDM1Q8TC05 714 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 EPB41L5Q9HCM4 733 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 KRT82Q9NSB4 513 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 ZNHIT6Q9NWK9 470 aaKnown RBP7.09□□□□□ -1.27
RIPK1-202ENST00000380409 RNF14Q9UBS8 474 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 ZNF180Q9UJW8 692 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 KCNH3Q9ULD8 1083 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 STX8Q9UNK0 236 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.09□□□□□ -1.27
RIPK1-202ENST00000380409 USP31Q70CQ4 1352 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 PLCH1Q4KWH8 1693 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 PNPLA7Q6ZV29 1317 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 EDC4Q6P2E9 1401 aaKnown RBP7.09□□□□□ -1.27
RIPK1-202ENST00000380409 TTC26A0AVF1 554 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.09□□□□□ -1.27
RIPK1-202ENST00000380409 MAGEB3O15480 346 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 ZBTB43O43298 467 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 PYGMP11217 842 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 VAV1P15498 845 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 ZNF827Q17R98 1081 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 PDCD4Q53EL6 469 aaKnown RBP7.09□□□□□ -1.27
RIPK1-202ENST00000380409 TNNI3KQ59H18 835 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 MFSD6Q6ZSS7 791 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 DHX32Q7L7V1 743 aaKnown RBP7.09□□□□□ -1.27
RIPK1-202ENST00000380409 GDAP1Q8TB36 358 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 PHKBQ93100 1093 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 SLC7A6OSQ96CW6 309 aaPredicted RBP7.09□□□□□ -1.27
RIPK1-202ENST00000380409 PGM2Q96G03 612 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 OSBPL10Q9BXB5 764 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 PFDN4Q9NQP4 134 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 USP15Q9Y4E8 981 aaPredicted RBP7.09□□□□□ -1.27
RIPK1-202ENST00000380409 FADS3Q9Y5Q0 445 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 FPGT-TNNI3KV9GXZ4 949 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 LAMB1P07942 1786 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 LRP5O75197 1615 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 NFAT5O94916 1531 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 B4E1Z4 1266 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 E9PBE3 544 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 NUDT17P0C025 328 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 HNRNPH3P31942 346 aaKnown RBP7.09□□□□□ -1.27
RIPK1-202ENST00000380409 KRT83P78385 493 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 TBL3Q12788 808 aaKnown RBP7.09□□□□□ -1.27
RIPK1-202ENST00000380409 EAPPQ56P03 285 aaPredicted RBP7.09□□□□□ -1.27
RIPK1-202ENST00000380409 FAM209AQ5JX71 171 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 MARK2Q7KZI7 788 aaKnown RBP7.09□□□□□ -1.27
RIPK1-202ENST00000380409 TMC3Q7Z5M5 1100 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 PEX5LQ8IYB4 626 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 ZBED8Q8IZ13 594 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 SLC7A5P1Q8MH63 180 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 CMTR1Q8N1G2 835 aaKnown RBP7.09□□□□□ -1.27
RIPK1-202ENST00000380409 BBS5Q8N3I7 341 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 WDR66Q8TBY9 1149 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 ITPKCQ96DU7 683 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 IFT74Q96LB3 600 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 RAB3IPQ96QF0 476 aaPredicted RBP7.09□□□□□ -1.27
RIPK1-202ENST00000380409 TIMMDC1Q9NPL8 285 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 NOVA2Q9UNW9 492 aaKnown RBP7.09□□□□□ -1.27
RIPK1-202ENST00000380409 HPS5Q9UPZ3 1129 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 ITM2BQ9Y287 266 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 A0A088AWK7 358 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 VILLO15195 856 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 CTNND1O60716 968 aaKnown RBP7.08□□□□□ -1.28
RIPK1-202ENST00000380409 EYA4O95677 639 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 IL2RBP14784 551 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 CYP7A1P22680 504 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 IL15P40933 162 aaPredicted RBP7.08□□□□□ -1.28
RIPK1-202ENST00000380409 BAG6P46379 1132 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 RCN2Q14257 317 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 GCKRQ14397 625 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 SLC44A4Q53GD3 710 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 DHRS4L2Q6PKH6 230 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 SPATA24Q86W54 205 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 TREML1Q86YW5 311 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 SLC17A8Q8NDX2 589 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 STAMQ92783 540 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 EGLN2Q96KS0 407 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 UIMC1Q96RL1 719 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 DUSP9Q99956 384 aaKnown RBP7.08□□□□□ -1.28
RIPK1-202ENST00000380409 PDGFDQ9GZP0 370 aaPredicted RBP7.08□□□□□ -1.28
RIPK1-202ENST00000380409 TPK1Q9H3S4 243 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 NDUFA13Q9P0J0 144 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 SEC63Q9UGP8 760 aaKnown RBP7.08□□□□□ -1.28
RIPK1-202ENST00000380409 PCNTO95613 3336 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 TTI1O43156 1089 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 AP1G1O43747 822 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 HNRNPCP07910 306 aaKnown RBP eCLIP7.08□□□□□ -1.28
RIPK1-202ENST00000380409 SLC5A1P13866 664 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 GUCY2FP51841 1108 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 PDE1BQ01064 536 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 CUL1Q13616 776 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 VPS72Q15906 364 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 KLHDC7AQ5VTJ3 777 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 PHLDB3Q6NSJ2 640 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 KANK3Q6NY19 840 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 OTUD6AQ7L8S5 288 aa7.08□□□□□ -1.28
RIPK1-202ENST00000380409 BPHLQ86WA6 291 aaPredicted RBP7.08□□□□□ -1.28
RIPK1-202ENST00000380409 ANKRD13BQ86YJ7 626 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms