RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 PIK3CDO00329 1044 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 CIITAP33076 1130 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 KIF11P52732 1056 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 ZNF280AP59817 542 aaPredicted RBP11.8□□□□□ -0.52
NEDD9-201ENST00000379433 CCDC15Q0P6D6 951 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 KIF5AQ12840 1032 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 TMEM132BQ14DG7 1078 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 PGM5Q15124 567 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 GOLGA6L1Q8N7Z2 621 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 MTMR14Q8NCE2 650 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 ZBED3Q96IU2 234 aaPredicted RBP11.8□□□□□ -0.52
NEDD9-201ENST00000379433 KCTD10Q9H3F6 313 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 PACSIN2Q9UNF0 486 aaPredicted RBP11.8□□□□□ -0.52
NEDD9-201ENST00000379433 PCDHA2Q9Y5H9 948 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 TBX3O15119 743 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 NCK2O43639 380 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 ATP1A1P05023 1023 aaKnown RBP11.8□□□□□ -0.52
NEDD9-201ENST00000379433 NR3C2P08235 984 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 HARSP12081 509 aaKnown RBP11.8□□□□□ -0.52
NEDD9-201ENST00000379433 TRAF1Q13077 416 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 SWSAP1Q6NVH7 229 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 NLRX1Q86UT6 975 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 MCF2L2Q86YR7 1114 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 LPAR1Q92633 364 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 CCDC51Q96ER9 411 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 EHD2Q9NZN4 543 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 PHLPP2Q6ZVD8 1323 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 A0A1W2PQC6 194 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 ZNF263O14978 683 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 CD151P48509 253 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 VGLL4Q14135 290 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 HS2ST1Q7LGA3 356 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 RSPH1Q8WYR4 309 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 SLC5A5Q92911 643 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 DCPSQ96C86 337 aaKnown RBP11.79□□□□□ -0.52
NEDD9-201ENST00000379433 SAAL1Q96ER3 474 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 PDCD2LQ9BRP1 358 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 POLR2AP24928 1970 aaKnown RBP11.79□□□□□ -0.52
NEDD9-201ENST00000379433 PGK2P07205 417 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 FAM200BP0CF97 657 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 EPB41P11171 864 aaKnown RBP11.79□□□□□ -0.52
NEDD9-201ENST00000379433 RPS12P25398 132 aaKnown RBP11.79□□□□□ -0.52
NEDD9-201ENST00000379433 YWHABP31946 246 aaKnown RBP11.79□□□□□ -0.52
NEDD9-201ENST00000379433 ARHGAP25P42331 645 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 MAGEA1P43355 309 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 EHHADHQ08426 723 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 CACTIN-AS1Q8N1I8 211 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 C1orf131Q8NDD1 294 aaKnown RBP11.79□□□□□ -0.52
NEDD9-201ENST00000379433 MBOAT7Q96N66 472 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 DNAJC7Q99615 494 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 NAPGQ99747 312 aaPredicted RBP11.79□□□□□ -0.52
NEDD9-201ENST00000379433 ST7Q9NRC1 585 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 GCNT4Q9P109 453 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 CHORDC1Q9UHD1 332 aaPredicted RBP11.79□□□□□ -0.52
NEDD9-201ENST00000379433 KLF15Q9UIH9 416 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.79□□□□□ -0.52
NEDD9-201ENST00000379433 SIK3Q9Y2K2 1263 aa11.79□□□□□ -0.52
NEDD9-201ENST00000379433 KRT86O43790 486 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 MARK3P27448 753 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 KLHL30Q0D2K2 578 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 EXOC3L4Q17RC7 722 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 C1orf186Q6ZWK4 172 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 FAM186BQ8IYM0 893 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 CD2APQ9Y5K6 639 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 FHOD1Q9Y613 1164 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 CALUO43852 315 aaPredicted RBP11.78□□□□□ -0.52
NEDD9-201ENST00000379433 CYP3A4P08684 503 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 PPP1R2P41236 205 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 NOP2P46087 812 aaKnown RBP11.78□□□□□ -0.52
NEDD9-201ENST00000379433 SFMBT2Q5VUG0 894 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 MOXD1Q6UVY6 613 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 TRIM74Q86UV6 250 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 TRIM73Q86UV7 250 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 KLRG1Q96E93 195 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 CEP170P1Q96L14 293 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 NUP58Q9BVL2 599 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 PACSIN1Q9BY11 444 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 AS3MTQ9HBK9 375 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 PXMP2Q9NR77 195 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 SEPT9Q9UHD8 586 aaPredicted RBP11.78□□□□□ -0.52
NEDD9-201ENST00000379433 CSADQ9Y600 493 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 MYH10P35580 1976 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 CCNE2O96020 404 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 USP14P54578 494 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 MTERF2Q49AM1 385 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 ZCWPW2Q504Y3 356 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 HYIQ5T013 277 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 ERGIC2Q96RQ1 377 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 PPP1R16BQ96T49 567 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 CBWD1Q9BRT8 395 aa11.78□□□□□ -0.52
NEDD9-201ENST00000379433 POLR3CQ9BUI4 534 aaPredicted RBP11.78□□□□□ -0.52
NEDD9-201ENST00000379433 AGO4Q9HCK5 861 aaKnown RBP11.78□□□□□ -0.52
NEDD9-201ENST00000379433 ASTN1O14525 1302 aa11.77□□□□□ -0.52
NEDD9-201ENST00000379433 GFPT2O94808 682 aa11.77□□□□□ -0.52
NEDD9-201ENST00000379433 QARSP47897 775 aaKnown RBP11.77□□□□□ -0.52
NEDD9-201ENST00000379433 KCNJ6P48051 423 aa11.77□□□□□ -0.52
NEDD9-201ENST00000379433 GYS2P54840 703 aa11.77□□□□□ -0.52
NEDD9-201ENST00000379433 KRT83P78385 493 aa11.77□□□□□ -0.52
NEDD9-201ENST00000379433 LMBRD2Q68DH5 695 aaPredicted RBP11.77□□□□□ -0.52
NEDD9-201ENST00000379433 BICD1Q96G01 975 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms