RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 CCDC60Q8IWA6 550 aaPredicted RBP21.29■■□□□ 1
SSU72-204ENST00000378726 IQCDQ96DY2 449 aa21.29■■□□□ 1
SSU72-204ENST00000378726 CHP1Q99653 195 aa21.29■■□□□ 1
SSU72-204ENST00000378726 FUT8Q9BYC5 575 aa21.29■■□□□ 1
SSU72-204ENST00000378726 FAM207AQ9NSI2 230 aaPredicted RBP21.29■■□□□ 1
SSU72-204ENST00000378726 ZMYM2Q9UBW7 1377 aa21.29■■□□□ 1
SSU72-204ENST00000378726 LCTP09848 1927 aa21.28■■□□□ 1
SSU72-204ENST00000378726 A0A1W2PQJ5 194 aa21.28■■□□□ 1
SSU72-204ENST00000378726 AKAP3O75969 853 aa21.28■■□□□ 1
SSU72-204ENST00000378726 STBD1O95210 358 aa21.28■■□□□ 1
SSU72-204ENST00000378726 MAPTP10636 758 aaKnown RBP21.28■■□□□ 1
SSU72-204ENST00000378726 ERVK-9P63128 1117 aa21.28■■□□□ 1
SSU72-204ENST00000378726 KCNMA1Q12791 1236 aa21.28■■□□□ 1
SSU72-204ENST00000378726 MKRN3Q13064 507 aaKnown RBP21.28■■□□□ 1
SSU72-204ENST00000378726 CEP170P1Q96L14 293 aa21.28■■□□□ 1
SSU72-204ENST00000378726 DRC1Q96MC2 740 aa21.28■■□□□ 1
SSU72-204ENST00000378726 MMP19Q99542 508 aa21.28■■□□□ 1
SSU72-204ENST00000378726 GPRC5CQ9NQ84 441 aa21.28■■□□□ 1
SSU72-204ENST00000378726 PNMA3Q9UL41 463 aa21.28■■□□□ 1
SSU72-204ENST00000378726 LOXHD1Q8IVV2 1947 aa21.28■■□□□ 1
SSU72-204ENST00000378726 K7ENM7 598 aa21.28■■□□□ 1
SSU72-204ENST00000378726 PPP1R37O75864 691 aa21.28■■□□□ 1
SSU72-204ENST00000378726 CASP4P49662 377 aa21.28■■□□□ 1
SSU72-204ENST00000378726 FAM102BQ5T8I3 360 aa21.28■■□□□ 1
SSU72-204ENST00000378726 HS2ST1Q7LGA3 356 aa21.28■■□□□ 1
SSU72-204ENST00000378726 GBP3Q9H0R5 595 aa21.28■■□□□ 1
SSU72-204ENST00000378726 MROH8Q9H579 483 aa21.28■■□□□ 1
SSU72-204ENST00000378726 GBA2Q9HCG7 927 aaPredicted RBP21.28■■□□□ 1
SSU72-204ENST00000378726 PUF60Q9UHX1 559 aaKnown RBP21.28■■□□□ 1
SSU72-204ENST00000378726 SUPT20HL2P0C7V6 817 aa21.27■■□□□ 1
SSU72-204ENST00000378726 CETPP11597 493 aa21.27■■□□□ 1
SSU72-204ENST00000378726 CHMP4BP1P59074 171 aa21.27■■□□□ 1
SSU72-204ENST00000378726 KCNH2Q12809 1159 aa21.27■■□□□ 1
SSU72-204ENST00000378726 WDR59Q6PJI9 974 aa21.27■■□□□ 1
SSU72-204ENST00000378726 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.27■■□□□ 1
SSU72-204ENST00000378726 EEPD1Q7L9B9 569 aa21.27■■□□□ 1
SSU72-204ENST00000378726 SRGAP1Q7Z6B7 1085 aa21.27■■□□□ 1
SSU72-204ENST00000378726 SYCP3Q8IZU3 236 aa21.27■■□□□ 1
SSU72-204ENST00000378726 BBXQ8WY36 941 aaPredicted RBP21.27■■□□□ 1
SSU72-204ENST00000378726 MS4A4AQ96JQ5 239 aa21.27■■□□□ 1
SSU72-204ENST00000378726 KIF5CO60282 957 aa21.27■□□□□ 0.99
SSU72-204ENST00000378726 ATG7O95352 703 aa21.27■□□□□ 0.99
SSU72-204ENST00000378726 FKBP1BP68106 108 aa21.27■□□□□ 0.99
SSU72-204ENST00000378726 NFIL3Q16649 462 aa21.27■□□□□ 0.99
SSU72-204ENST00000378726 ZNF569Q5MCW4 686 aa21.27■□□□□ 0.99
SSU72-204ENST00000378726 METTL14Q9HCE5 456 aaKnown RBP21.27■□□□□ 0.99
SSU72-204ENST00000378726 ZNHIT6Q9NWK9 470 aaKnown RBP21.27■□□□□ 0.99
SSU72-204ENST00000378726 CALCOCO1Q9P1Z2 691 aa21.27■□□□□ 0.99
SSU72-204ENST00000378726 PDHXO00330 501 aa21.26■□□□□ 0.99
SSU72-204ENST00000378726 EPHB6O15197 1021 aa21.26■□□□□ 0.99
SSU72-204ENST00000378726 EPB41P11171 864 aaKnown RBP21.26■□□□□ 0.99
SSU72-204ENST00000378726 GTF2A2P52657 109 aa21.26■□□□□ 0.99
SSU72-204ENST00000378726 PEX3P56589 373 aa21.26■□□□□ 0.99
SSU72-204ENST00000378726 LONRF2Q1L5Z9 754 aa21.26■□□□□ 0.99
SSU72-204ENST00000378726 NEK11Q8NG66 645 aa21.26■□□□□ 0.99
SSU72-204ENST00000378726 MPHOSPH6Q99547 160 aaKnown RBP21.26■□□□□ 0.99
SSU72-204ENST00000378726 DNAJC25-GNG10A0A024R161 153 aa21.25■□□□□ 0.99
SSU72-204ENST00000378726 SLC16A3O15427 465 aaKnown RBP21.25■□□□□ 0.99
SSU72-204ENST00000378726 TGFB3P10600 412 aa21.25■□□□□ 0.99
SSU72-204ENST00000378726 UBA1P22314 1058 aaKnown RBP21.25■□□□□ 0.99
SSU72-204ENST00000378726 HNRNPH2P55795 449 aaKnown RBP21.25■□□□□ 0.99
SSU72-204ENST00000378726 C2orf69Q8N8R5 385 aa21.25■□□□□ 0.99
SSU72-204ENST00000378726 ACRBPQ8NEB7 543 aa21.25■□□□□ 0.99
SSU72-204ENST00000378726 AGPAT3Q9NRZ7 376 aa21.25■□□□□ 0.99
SSU72-204ENST00000378726 TMEM51Q9NW97 253 aa21.25■□□□□ 0.99
SSU72-204ENST00000378726 CDC23Q9UJX2 597 aa21.25■□□□□ 0.99
SSU72-204ENST00000378726 SYNGAP1Q96PV0 1343 aa21.25■□□□□ 0.99
SSU72-204ENST00000378726 CCL15-CCL14A0A0B4J2E2 113 aa21.25■□□□□ 0.99
SSU72-204ENST00000378726 CELF2O95319 508 aaKnown RBP21.25■□□□□ 0.99
SSU72-204ENST00000378726 ABL1P00519 1130 aa21.25■□□□□ 0.99
SSU72-204ENST00000378726 XRCC5P13010 732 aaKnown RBP21.25■□□□□ 0.99
SSU72-204ENST00000378726 PSMC2P35998 433 aaKnown RBP21.25■□□□□ 0.99
SSU72-204ENST00000378726 PRKCEQ02156 737 aa21.25■□□□□ 0.99
SSU72-204ENST00000378726 ALCAMQ13740 583 aa21.25■□□□□ 0.99
SSU72-204ENST00000378726 MEA1Q16626 185 aa21.25■□□□□ 0.99
SSU72-204ENST00000378726 CCL15Q16663 113 aa21.25■□□□□ 0.99
SSU72-204ENST00000378726 HAUS6Q7Z4H7 955 aa21.25■□□□□ 0.99
SSU72-204ENST00000378726 FGD4Q96M96 766 aa21.25■□□□□ 0.99
SSU72-204ENST00000378726 CRACR2AQ9BSW2 395 aa21.25■□□□□ 0.99
SSU72-204ENST00000378726 PORCNQ9H237 461 aa21.25■□□□□ 0.99
SSU72-204ENST00000378726 ANKZF1Q9H8Y5 726 aa21.25■□□□□ 0.99
SSU72-204ENST00000378726 SEPT9Q9UHD8 586 aaPredicted RBP21.25■□□□□ 0.99
SSU72-204ENST00000378726 EPN1Q9Y6I3 576 aaPredicted RBP21.25■□□□□ 0.99
SSU72-204ENST00000378726 BTBD19C9JJ37 291 aa21.24■□□□□ 0.99
SSU72-204ENST00000378726 SOCS7O14512 581 aa21.24■□□□□ 0.99
SSU72-204ENST00000378726 NEDD9Q14511 834 aa21.24■□□□□ 0.99
SSU72-204ENST00000378726 XKR3Q5GH77 459 aa21.24■□□□□ 0.99
SSU72-204ENST00000378726 GPRC5AQ8NFJ5 357 aa21.24■□□□□ 0.99
SSU72-204ENST00000378726 GOLGA5Q8TBA6 731 aa21.24■□□□□ 0.99
SSU72-204ENST00000378726 ZNF526Q8TF50 670 aaPredicted RBP21.24■□□□□ 0.99
SSU72-204ENST00000378726 TMEM206Q9H813 350 aa21.24■□□□□ 0.99
SSU72-204ENST00000378726 EFCC1Q9HA90 598 aa21.24■□□□□ 0.99
SSU72-204ENST00000378726 ZNF302Q9NR11 478 aa21.24■□□□□ 0.99
SSU72-204ENST00000378726 DMAC2Q9NW81 257 aa21.24■□□□□ 0.99
SSU72-204ENST00000378726 MAFBQ9Y5Q3 323 aaPredicted RBP21.24■□□□□ 0.99
SSU72-204ENST00000378726 CCDC151A5D8V7 595 aa21.24■□□□□ 0.99
SSU72-204ENST00000378726 TFRCP02786 760 aaKnown RBP21.24■□□□□ 0.99
SSU72-204ENST00000378726 SHCBP1Q8NEM2 672 aa21.24■□□□□ 0.99
SSU72-204ENST00000378726 GTF3C2Q8WUA4 911 aaPredicted RBP21.24■□□□□ 0.99
SSU72-204ENST00000378726 ACCSQ96QU6 501 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms