RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 PPARGC1AQ9UBK2 798 aaKnown RBP17.43■□□□□ 0.38
RGP1-201ENST00000378078 RPRD2Q5VT52 1461 aaKnown RBP17.42■□□□□ 0.38
RGP1-201ENST00000378078 PFKFB2O60825 505 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 NPM3O75607 178 aaKnown RBP17.42■□□□□ 0.38
RGP1-201ENST00000378078 FOSP01100 380 aaPredicted RBP17.42■□□□□ 0.38
RGP1-201ENST00000378078 ANGPT1Q15389 498 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 ZNF746Q6NUN9 644 aaPredicted RBP17.42■□□□□ 0.38
RGP1-201ENST00000378078 STK17AQ9UEE5 414 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 ZNF608Q9ULD9 1512 aaPredicted RBP17.42■□□□□ 0.38
RGP1-201ENST00000378078 F8W8V4 182 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 GCLMP48507 274 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 CRLF3Q8IUI8 442 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 OR6P1Q8NGX9 317 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 PACSIN2Q9UNF0 486 aaPredicted RBP17.42■□□□□ 0.38
RGP1-201ENST00000378078 EIF2AK4Q9P2K8 1649 aaKnown RBP17.42■□□□□ 0.38
RGP1-201ENST00000378078 ECE2O60344 883 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 KRT14P02533 472 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 MFSD14CQ5VZR4 134 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 PKN3Q6P5Z2 889 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 WDR11Q9BZH6 1224 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 PIM2Q9P1W9 311 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 PCDHA6Q9UN73 950 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 PCDHA8Q9Y5H6 950 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 MEFVO15553 781 aaPredicted RBP17.42■□□□□ 0.38
RGP1-201ENST00000378078 PDE8BO95263 885 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 CRKP46108 304 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 CAPZA2P47755 286 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 PCSK7Q16549 785 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 KIZQ2M2Z5 673 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 LVRNQ6Q4G3 990 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 ZNF302Q9NR11 478 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 UBE4BO95155 1302 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 AK9Q5TCS8 1911 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 MCTP2Q6DN12 878 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 KANSL2Q9H9L4 492 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 LEMD3Q9Y2U8 911 aa17.42■□□□□ 0.38
RGP1-201ENST00000378078 TCP1P17987 556 aaKnown RBP17.41■□□□□ 0.38
RGP1-201ENST00000378078 GPATCH4Q5T3I0 446 aaKnown RBP17.41■□□□□ 0.38
RGP1-201ENST00000378078 ZNF658Q5TYW1 1059 aaPredicted RBP17.41■□□□□ 0.38
RGP1-201ENST00000378078 TTC23LQ6PF05 361 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 RRM2BQ7LG56 351 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 TEX12Q9BXU0 123 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 BHMT2Q9H2M3 363 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 PCDHB6Q9Y5E3 794 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 FAM47DPA6NHR8 397 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 PDHA1P08559 390 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 AGAP3Q96P47 875 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 SEPT5Q99719 369 aaPredicted RBP17.41■□□□□ 0.38
RGP1-201ENST00000378078 ZNF263O14978 683 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 ZNF211Q13398 564 aaPredicted RBP17.41■□□□□ 0.38
RGP1-201ENST00000378078 HS6ST3Q8IZP7 471 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 ADGRA2Q96PE1 1338 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 PRAMEF18Q5VWM3 479 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 FBXO41Q8TF61 875 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 DCTN4Q9UJW0 460 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 RC3H1Q5TC82 1133 aaKnown RBP17.41■□□□□ 0.38
RGP1-201ENST00000378078 OR6J1Q8NGC5 347 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 TTC8Q8TAM2 541 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 ZMYND12Q9H0C1 365 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 IQANK1A0A1B0GTG1 560 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 TBC1D12O60347 775 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 COPS2P61201 443 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 C11orf57Q6ZUT1 292 aaPredicted RBP17.41■□□□□ 0.38
RGP1-201ENST00000378078 SELENONQ9NZV5 590 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 SEL1LQ9UBV2 794 aa17.41■□□□□ 0.38
RGP1-201ENST00000378078 SEPT12Q8IYM1 358 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 KIF12Q96FN5 646 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 RUNDC3BQ96NL0 473 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 CHCHD3Q9NX63 227 aaKnown RBP17.4■□□□□ 0.38
RGP1-201ENST00000378078 DPCR1Q3MIW9 517 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 GALNT17Q6IS24 598 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 BEST2Q8NFU1 509 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 MUC3BQ9H195 1237 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 CMA1P23946 247 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 KCNJ6P48051 423 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 GYS2P54840 703 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 CENPUQ71F23 418 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 NUP93Q8N1F7 819 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 NRBF2Q96F24 287 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 SH2D3AQ9BRG2 576 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 AIPL1Q9NZN9 384 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 PYCARDQ9ULZ3 195 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 MLH3Q9UHC1 1453 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 LRRC8EQ6NSJ5 796 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 ATP6V0A4Q9HBG4 840 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 TADA3O75528 432 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 FASTKD1Q53R41 847 aaKnown RBP17.4■□□□□ 0.38
RGP1-201ENST00000378078 IL17REQ8NFR9 667 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 GPT2Q8TD30 523 aa17.4■□□□□ 0.38
RGP1-201ENST00000378078 UPF3AQ9H1J1 476 aaKnown RBP17.4■□□□□ 0.38
RGP1-201ENST00000378078 PGRMC1O00264 195 aaKnown RBP17.39■□□□□ 0.38
RGP1-201ENST00000378078 COPEO14579 308 aa17.39■□□□□ 0.38
RGP1-201ENST00000378078 AKT1P31749 480 aa17.39■□□□□ 0.38
RGP1-201ENST00000378078 TRIML1Q8N9V2 468 aa17.39■□□□□ 0.38
RGP1-201ENST00000378078 SLC17A8Q8NDX2 589 aa17.39■□□□□ 0.38
RGP1-201ENST00000378078 DCUN1D1Q96GG9 259 aa17.39■□□□□ 0.38
RGP1-201ENST00000378078 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.39■□□□□ 0.38
RGP1-201ENST00000378078 ARHGEF37A1IGU5 675 aa17.39■□□□□ 0.37
RGP1-201ENST00000378078 PCCAP05165 728 aaPredicted RBP17.39■□□□□ 0.37
RGP1-201ENST00000378078 KCNA2P16389 499 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms