RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 DEPTORQ8TB45 409 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 ZNF564Q8TBZ8 553 aaPredicted RBP9.41□□□□□ -0.9
PCDH9-202ENST00000377865 ACTRT1Q8TDG2 376 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 SERPINB13Q9UIV8 391 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 SIGLEC1Q9BZZ2 1709 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 TTI1O43156 1089 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 NPEPPSP55786 919 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 MEA1Q16626 185 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 ZNF449Q6P9G9 518 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 TMEM260Q9NX78 707 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 ZNF219Q9P2Y4 722 aaPredicted RBP9.41□□□□□ -0.9
PCDH9-202ENST00000377865 GGA2Q9UJY4 613 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 MINPP1Q9UNW1 487 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 PCDHB4Q9Y5E5 795 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 TJP3O95049 919 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 HARSP12081 509 aaKnown RBP9.41□□□□□ -0.9
PCDH9-202ENST00000377865 ABCB5Q2M3G0 1257 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 LRRC23Q53EV4 343 aaPredicted RBP9.41□□□□□ -0.9
PCDH9-202ENST00000377865 YTHDF3Q7Z739 585 aaKnown RBP9.41□□□□□ -0.9
PCDH9-202ENST00000377865 KCTD17Q8N5Z5 321 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 POMGNT1Q8WZA1 660 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 SPDL1Q96EA4 605 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 STK33Q9BYT3 514 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 ZWINTO95229 277 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 TMEM253P0C7T8 217 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 YWHAGP61981 247 aaKnown RBP eCLIP9.41□□□□□ -0.9
PCDH9-202ENST00000377865 C12orf60Q5U649 245 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 SH3RF1Q7Z6J0 888 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 NME8Q8N427 588 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 EIF1ADQ8N9N8 165 aaKnown RBP9.41□□□□□ -0.9
PCDH9-202ENST00000377865 ANKS1AQ92625 1134 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 CDKL2Q92772 493 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 DHX36Q9H2U1 1008 aaKnown RBP9.41□□□□□ -0.9
PCDH9-202ENST00000377865 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.41□□□□□ -0.9
PCDH9-202ENST00000377865 PXDNQ92626 1479 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 MYMKA6NI61 221 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 SPDYCQ5MJ68 293 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 CYFIP1Q7L576 1253 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 FAM96AQ9H5X1 160 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 SAYSD1Q9NPB0 183 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 GDF3Q9NR23 364 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 KBTBD4Q9NVX7 518 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 PHF20L1A8MW92 1017 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 RTN2O75298 545 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 DLATP10515 647 aaKnown RBP9.4□□□□□ -0.9
PCDH9-202ENST00000377865 ALDH1B1P30837 517 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 SERPINB6P35237 376 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 CASP7P55210 303 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 SUPT20HQ8NEM7 779 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 NEDD1Q8NHV4 660 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 ARL8AQ96BM9 186 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 CCDC127Q96BQ5 260 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 DTNBP1Q96EV8 351 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 AGPAT1Q99943 283 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 NUP85Q9BW27 656 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 OSBPL1AQ9BXW6 950 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 BHMT2Q9H2M3 363 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 ETNK1Q9HBU6 452 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 POTEB3A0JP26 581 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 POTECB2RU33 542 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 HAUS5O94927 633 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 CD19P15391 556 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 TPD52P55327 224 aaPredicted RBP9.4□□□□□ -0.9
PCDH9-202ENST00000377865 ANKRD20A4Q4UJ75 823 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 ANKRD20A8PQ5CZ79 823 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 ANKRD20A2Q5SQ80 823 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 ANKRD20A1Q5TYW2 823 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 POTEBQ6S5H4 581 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 SEPT14Q6ZU15 432 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 RFX6Q8HWS3 928 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 RIBC1Q8N443 379 aaPredicted RBP9.4□□□□□ -0.9
PCDH9-202ENST00000377865 NSUN4Q96CB9 384 aaKnown RBP9.4□□□□□ -0.9
PCDH9-202ENST00000377865 NUF2Q9BZD4 464 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 FOXP3Q9BZS1 431 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 NOD2Q9HC29 1040 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 SMARCAL1Q9NZC9 954 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 SMG5Q9UPR3 1016 aaKnown RBP9.4□□□□□ -0.9
PCDH9-202ENST00000377865 RIMS1Q86UR5 1692 aaKnown RBP9.4□□□□□ -0.9
PCDH9-202ENST00000377865 A0A0A6YYK5 440 aaPredicted RBP9.4□□□□□ -0.9
PCDH9-202ENST00000377865 LRRC10BA6NIK2 292 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 MCF2LO15068 1137 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 GYG2O15488 501 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 SYF2O95926 243 aaKnown RBP9.4□□□□□ -0.9
PCDH9-202ENST00000377865 UCHL3P15374 230 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 SLC16A2P36021 539 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 PRELPP51888 382 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 CDR2Q01850 454 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 GRAPQ13588 217 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 NBPF20Q3BBV1 942 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 CD302Q8IX05 232 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 GRAPLQ8TC17 118 aaPredicted RBP9.4□□□□□ -0.9
PCDH9-202ENST00000377865 ANKRD27Q96NW4 1050 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 OLFM3Q96PB7 478 aa9.4□□□□□ -0.9
PCDH9-202ENST00000377865 ESYT2A0FGR8 921 aa9.4□□□□□ -0.91
PCDH9-202ENST00000377865 TCP11X1B4DZS4 312 aa9.4□□□□□ -0.91
PCDH9-202ENST00000377865 SPECC1L-ADORA2AF8WAN1 911 aa9.4□□□□□ -0.91
PCDH9-202ENST00000377865 PJA2O43164 708 aa9.4□□□□□ -0.91
PCDH9-202ENST00000377865 TNNC2P02585 160 aa9.4□□□□□ -0.91
PCDH9-202ENST00000377865 ITIH2P19823 946 aa9.4□□□□□ -0.91
PCDH9-202ENST00000377865 SLC1A1P43005 524 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms