RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 RFC4P35249 363 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 EIF6P56537 245 aaKnown RBP17.88■□□□□ 0.45
TRIM39-201ENST00000376656 SLC8A3P57103 927 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 CCDC38Q502W7 563 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 C18orf8Q96DM3 657 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 CCDC113Q9H0I3 377 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 DHX36Q9H2U1 1008 aaKnown RBP17.88■□□□□ 0.45
TRIM39-201ENST00000376656 GRHL1Q9NZI5 618 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 XIRP1Q702N8 1843 aaKnown RBP17.88■□□□□ 0.45
TRIM39-201ENST00000376656 CLK2P49760 499 aaKnown RBP17.88■□□□□ 0.45
TRIM39-201ENST00000376656 NCALDP61601 193 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 SFR1Q86XK3 245 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 CLEC10AQ8IUN9 316 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 RFFLQ8WZ73 363 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 ALG3Q92685 438 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 SLC35C1Q96A29 364 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 ARHGEF26Q96DR7 871 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 TMOD4Q9NZQ9 345 aa17.88■□□□□ 0.45
TRIM39-201ENST00000376656 NCANO14594 1321 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 GOLGA6L10A0A0M3HER8 536 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 FAM187AA6NFU0 413 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 RARAP10276 462 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 KRT13P13646 458 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 FGFR4P22455 802 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 ZNF268Q14587 947 aaPredicted RBP17.87■□□□□ 0.45
TRIM39-201ENST00000376656 CLEC4GQ6UXB4 293 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 WDR66Q8TBY9 1149 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 L3MBTL3Q96JM7 780 aaPredicted RBP17.87■□□□□ 0.45
TRIM39-201ENST00000376656 RTFDC1Q9BY42 306 aaPredicted RBP17.87■□□□□ 0.45
TRIM39-201ENST00000376656 CARD9Q9H257 536 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 CCDC134Q9H6E4 229 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 BCAS3Q9H6U6 928 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 AGTP01019 485 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 NQO1P15559 274 aaKnown RBP17.87■□□□□ 0.45
TRIM39-201ENST00000376656 FERP16591 822 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 PSMC6P62333 389 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 MAPK7Q13164 816 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 COL23A1Q86Y22 540 aaPredicted RBP17.87■□□□□ 0.45
TRIM39-201ENST00000376656 FMNL3Q8IVF7 1028 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 PRCCQ92733 491 aaPredicted RBP17.87■□□□□ 0.45
TRIM39-201ENST00000376656 DBR1Q9UK59 544 aaKnown RBP17.87■□□□□ 0.45
TRIM39-201ENST00000376656 ARFGEF1Q9Y6D6 1849 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 CLIC2O15247 247 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 BTDP43251 543 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 ALDH5A1P51649 535 aaPredicted RBP17.87■□□□□ 0.45
TRIM39-201ENST00000376656 GSTO1P78417 241 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 GIT2Q14161 759 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 CNGA2Q16280 664 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 C6orf118Q5T5N4 469 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 TBC1D9BQ66K14 1250 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 JMJD4Q9H9V9 463 aa17.87■□□□□ 0.45
TRIM39-201ENST00000376656 RTCBQ9Y3I0 505 aaKnown RBP17.87■□□□□ 0.45
TRIM39-201ENST00000376656 SNX3O60493 162 aa17.86■□□□□ 0.45
TRIM39-201ENST00000376656 STAT1P42224 750 aa17.86■□□□□ 0.45
TRIM39-201ENST00000376656 PTGIRP43119 386 aa17.86■□□□□ 0.45
TRIM39-201ENST00000376656 RPL21P46778 160 aaKnown RBP17.86■□□□□ 0.45
TRIM39-201ENST00000376656 MEIS1O00470 390 aa17.86■□□□□ 0.45
TRIM39-201ENST00000376656 NR3C1P04150 777 aa17.86■□□□□ 0.45
TRIM39-201ENST00000376656 TMEM253P0C7T8 217 aa17.86■□□□□ 0.45
TRIM39-201ENST00000376656 ADCY2Q08462 1091 aa17.86■□□□□ 0.45
TRIM39-201ENST00000376656 DHX34Q14147 1143 aaKnown RBP17.86■□□□□ 0.45
TRIM39-201ENST00000376656 LRRC14Q15048 493 aa17.86■□□□□ 0.45
TRIM39-201ENST00000376656 SLC10A5Q5PT55 438 aa17.86■□□□□ 0.45
TRIM39-201ENST00000376656 CTNNBL1Q8WYA6 563 aaPredicted RBP17.86■□□□□ 0.45
TRIM39-201ENST00000376656 REEP2Q9BRK0 252 aa17.86■□□□□ 0.45
TRIM39-201ENST00000376656 ECT2Q9H8V3 914 aa17.86■□□□□ 0.45
TRIM39-201ENST00000376656 PCDHB13Q9Y5F0 798 aa17.86■□□□□ 0.45
TRIM39-201ENST00000376656 CDK5RAP2Q96SN8 1893 aa17.86■□□□□ 0.45
TRIM39-201ENST00000376656 PITPNM2Q9BZ72 1349 aa17.86■□□□□ 0.45
TRIM39-201ENST00000376656 ROBO1Q9Y6N7 1651 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 CDC25CP30307 473 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 PABPC4Q13310 644 aaKnown RBP eCLIP17.85■□□□□ 0.45
TRIM39-201ENST00000376656 EPM2AIP1Q7L775 607 aaPredicted RBP17.85■□□□□ 0.45
TRIM39-201ENST00000376656 NLRP3Q96P20 1036 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 GPR101Q96P66 508 aaPredicted RBP17.85■□□□□ 0.45
TRIM39-201ENST00000376656 NSRP1Q9H0G5 558 aaKnown RBP17.85■□□□□ 0.45
TRIM39-201ENST00000376656 TAS2R14Q9NYV8 317 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 DIS3Q9Y2L1 958 aaKnown RBP17.85■□□□□ 0.45
TRIM39-201ENST00000376656 ASTN1O14525 1302 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 A8MUI8 341 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 CALUO43852 315 aaPredicted RBP17.85■□□□□ 0.45
TRIM39-201ENST00000376656 NOVP48745 357 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 KCNA1Q09470 495 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 TTBK2Q6IQ55 1244 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 ADGRF4Q8IZF3 695 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 MGARPQ8TDB4 240 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 ZNF570Q96NI8 536 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 NAP1L3Q99457 506 aaPredicted RBP17.85■□□□□ 0.45
TRIM39-201ENST00000376656 IKZF4Q9H2S9 585 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 COG5Q9UP83 839 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 IGF2BP3O00425 579 aaKnown RBP eCLIP17.85■□□□□ 0.45
TRIM39-201ENST00000376656 ALADP13716 330 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 VCAM1P19320 739 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 AUHQ13825 339 aaKnown RBP17.85■□□□□ 0.45
TRIM39-201ENST00000376656 PPP2R5EQ16537 467 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 NAIF1Q69YI7 327 aaPredicted RBP17.85■□□□□ 0.45
TRIM39-201ENST00000376656 KIF2BQ8N4N8 673 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 CCHCR1Q8TD31 782 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 TBC1D22AQ8WUA7 517 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 ZNF622Q969S3 477 aaKnown RBP eCLIP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms