RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 MRPS27Q92552 414 aaKnown RBP13.74□□□□□ -0.21
LSM2-208ENST00000375661 ZMYND12Q9H0C1 365 aa13.74□□□□□ -0.21
LSM2-208ENST00000375661 S1PR5Q9H228 398 aa13.74□□□□□ -0.21
LSM2-208ENST00000375661 ATP6V0A4Q9HBG4 840 aa13.74□□□□□ -0.21
LSM2-208ENST00000375661 AGO4Q9HCK5 861 aaKnown RBP13.74□□□□□ -0.21
LSM2-208ENST00000375661 SH3GLB2Q9NR46 395 aa13.74□□□□□ -0.21
LSM2-208ENST00000375661 TYW1Q9NV66 732 aaKnown RBP13.74□□□□□ -0.21
LSM2-208ENST00000375661 TMEM161AQ9NX61 479 aa13.74□□□□□ -0.21
LSM2-208ENST00000375661 ST3GAL5Q9UNP4 418 aa13.74□□□□□ -0.21
LSM2-208ENST00000375661 PCDHGC5Q9Y5F6 944 aa13.74□□□□□ -0.21
LSM2-208ENST00000375661 PLXNA3P51805 1871 aa13.74□□□□□ -0.21
LSM2-208ENST00000375661 MEIS1O00470 390 aa13.73□□□□□ -0.21
LSM2-208ENST00000375661 HOXA2O43364 376 aa13.73□□□□□ -0.21
LSM2-208ENST00000375661 ARP10275 920 aa13.73□□□□□ -0.21
LSM2-208ENST00000375661 PPM1AP35813 382 aa13.73□□□□□ -0.21
LSM2-208ENST00000375661 CLK2P49760 499 aaKnown RBP13.73□□□□□ -0.21
LSM2-208ENST00000375661 ADCY7P51828 1080 aa13.73□□□□□ -0.21
LSM2-208ENST00000375661 CRYBB1P53674 252 aaPredicted RBP13.73□□□□□ -0.21
LSM2-208ENST00000375661 ERVFC1P60507 584 aa13.73□□□□□ -0.21
LSM2-208ENST00000375661 HMGN5P82970 282 aaKnown RBP13.73□□□□□ -0.21
LSM2-208ENST00000375661 ITGB3BPQ13352 177 aaPredicted RBP13.73□□□□□ -0.21
LSM2-208ENST00000375661 AP3B2Q13367 1082 aa13.73□□□□□ -0.21
LSM2-208ENST00000375661 NPY5RQ15761 445 aa13.73□□□□□ -0.21
LSM2-208ENST00000375661 ANKRD54Q6NXT1 300 aa13.73□□□□□ -0.21
LSM2-208ENST00000375661 ABHD15Q6UXT9 468 aa13.73□□□□□ -0.21
LSM2-208ENST00000375661 KIAA0319LQ8IZA0 1049 aa13.73□□□□□ -0.21
LSM2-208ENST00000375661 ZNF710Q8N1W2 664 aa13.73□□□□□ -0.21
LSM2-208ENST00000375661 CYP2W1Q8TAV3 490 aa13.73□□□□□ -0.21
LSM2-208ENST00000375661 WASF1Q92558 559 aa13.73□□□□□ -0.21
LSM2-208ENST00000375661 GLT8D2Q9H1C3 349 aa13.73□□□□□ -0.21
LSM2-208ENST00000375661 CWH43Q9H720 699 aa13.73□□□□□ -0.21
LSM2-208ENST00000375661 NGRNQ9NPE2 291 aaKnown RBP13.73□□□□□ -0.21
LSM2-208ENST00000375661 KCNJ14Q9UNX9 436 aa13.73□□□□□ -0.21
LSM2-208ENST00000375661 ZDBF2Q9HCK1 2354 aa13.72□□□□□ -0.21
LSM2-208ENST00000375661 MYO10Q9HD67 2058 aa13.72□□□□□ -0.21
LSM2-208ENST00000375661 GFRA3O60609 400 aa13.72□□□□□ -0.21
LSM2-208ENST00000375661 SREBF1P36956 1147 aa13.72□□□□□ -0.21
LSM2-208ENST00000375661 TECP42680 631 aa13.72□□□□□ -0.21
LSM2-208ENST00000375661 VCPP55072 806 aaKnown RBP13.72□□□□□ -0.21
LSM2-208ENST00000375661 FAM102BQ5T8I3 360 aa13.72□□□□□ -0.21
LSM2-208ENST00000375661 CCDC148Q8NFR7 591 aa13.72□□□□□ -0.21
LSM2-208ENST00000375661 CCDC12Q8WUD4 166 aaPredicted RBP13.72□□□□□ -0.21
LSM2-208ENST00000375661 TMEM40Q8WWA1 233 aa13.72□□□□□ -0.21
LSM2-208ENST00000375661 RIPOR3Q96MK2 946 aa13.72□□□□□ -0.21
LSM2-208ENST00000375661 PHF20Q9BVI0 1012 aa13.72□□□□□ -0.21
LSM2-208ENST00000375661 ANO3Q9BYT9 981 aa13.72□□□□□ -0.21
LSM2-208ENST00000375661 TMEM117Q9H0C3 514 aa13.72□□□□□ -0.21
LSM2-208ENST00000375661 CDHR5Q9HBB8 845 aa13.72□□□□□ -0.21
LSM2-208ENST00000375661 C6orf50Q9HD87 102 aa13.72□□□□□ -0.21
LSM2-208ENST00000375661 GINS2Q9Y248 185 aa13.72□□□□□ -0.21
LSM2-208ENST00000375661 NR2E1Q9Y466 385 aa13.72□□□□□ -0.21
LSM2-208ENST00000375661 BACH1O14867 736 aa13.71□□□□□ -0.21
LSM2-208ENST00000375661 GNA11P29992 359 aa13.71□□□□□ -0.21
LSM2-208ENST00000375661 NLRP5P59047 1200 aa13.71□□□□□ -0.21
LSM2-208ENST00000375661 RBM10P98175 930 aaKnown RBP13.71□□□□□ -0.21
LSM2-208ENST00000375661 KRT17Q04695 432 aa13.71□□□□□ -0.21
LSM2-208ENST00000375661 DSC3Q14574 896 aa13.71□□□□□ -0.21
LSM2-208ENST00000375661 TPRNQ4KMQ1 711 aa13.71□□□□□ -0.21
LSM2-208ENST00000375661 PLPP4Q5VZY2 271 aa13.71□□□□□ -0.21
LSM2-208ENST00000375661 MIS18BP1Q6P0N0 1132 aa13.71□□□□□ -0.21
LSM2-208ENST00000375661 PDXDC2PQ6P474 469 aa13.71□□□□□ -0.21
LSM2-208ENST00000375661 SYCE2Q6PIF2 218 aa13.71□□□□□ -0.21
LSM2-208ENST00000375661 HSCBQ8IWL3 235 aa13.71□□□□□ -0.21
LSM2-208ENST00000375661 UBALD2Q8IYN6 164 aa13.71□□□□□ -0.21
LSM2-208ENST00000375661 FAM177A1Q8N128 213 aaPredicted RBP13.71□□□□□ -0.21
LSM2-208ENST00000375661 BBXQ8WY36 941 aaPredicted RBP13.71□□□□□ -0.21
LSM2-208ENST00000375661 CASP10Q92851 521 aa13.71□□□□□ -0.21
LSM2-208ENST00000375661 NECTIN4Q96NY8 510 aa13.71□□□□□ -0.21
LSM2-208ENST00000375661 TCF25Q9BQ70 676 aa13.71□□□□□ -0.21
LSM2-208ENST00000375661 ENTPD7Q9NQZ7 604 aa13.71□□□□□ -0.21
LSM2-208ENST00000375661 ZNF302Q9NR11 478 aa13.71□□□□□ -0.21
LSM2-208ENST00000375661 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.71□□□□□ -0.21
LSM2-208ENST00000375661 ZBTB42B2RXF5 422 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 PROB1E7EW31 1015 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 M0R2N6 131 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 CCNE2O96020 404 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 IBSPP21815 317 aaPredicted RBP13.7□□□□□ -0.22
LSM2-208ENST00000375661 GJB2P29033 226 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 FOSBP53539 338 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 ITIH3Q06033 890 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 JAKMIP3Q5VZ66 844 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 KCNT2Q6UVM3 1135 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 ZBTB33Q86T24 672 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 FAM228AQ86W67 206 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 CCDC60Q8IWA6 550 aaPredicted RBP13.7□□□□□ -0.22
LSM2-208ENST00000375661 LRRC43Q8N309 656 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 FAM184AQ8NB25 1140 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 DAGLBQ8NCG7 672 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 ATOH1Q92858 354 aaPredicted RBP13.7□□□□□ -0.22
LSM2-208ENST00000375661 PGBD1Q96JS3 809 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 ZNF558Q96NG5 402 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 OSMRQ99650 979 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 PCDHA4Q9UN74 947 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 CEP131Q9UPN4 1083 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 SMC3Q9UQE7 1217 aa13.7□□□□□ -0.22
LSM2-208ENST00000375661 CARNS1A5YM72 827 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 MAGEB2O15479 319 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 GALR2O43603 387 aaPredicted RBP13.69□□□□□ -0.22
LSM2-208ENST00000375661 GPR32O75388 356 aa13.69□□□□□ -0.22
LSM2-208ENST00000375661 C22orf31O95567 290 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms