RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 IKZF4Q9H2S9 585 aa19.72■□□□□ 0.75
HLA-DQB1-201ENST00000374943 FBXL5Q9UKA1 691 aa19.72■□□□□ 0.75
HLA-DQB1-201ENST00000374943 FRMD4BQ9Y2L6 1034 aa19.72■□□□□ 0.75
HLA-DQB1-201ENST00000374943 MCM3APO60318 1980 aa19.72■□□□□ 0.75
HLA-DQB1-201ENST00000374943 SOWAHBA6NEL2 793 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 PEX10O60683 326 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 URI1O94763 535 aaPredicted RBP19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 OSBPP22059 807 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 NCBP1Q09161 790 aaKnown RBP19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 DCAF17Q5H9S7 520 aaPredicted RBP19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 MAEAQ7L5Y9 396 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 CCDC60Q8IWA6 550 aaPredicted RBP19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 SYCP3Q8IZU3 236 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 KIFAP3Q92845 792 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 MYO6Q9UM54 1294 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 PLXNA1Q9UIW2 1896 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 RTP1P59025 263 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 POLR2FP61218 127 aaKnown RBP19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 SP2Q02086 613 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 EXOC3L4Q17RC7 722 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 ZNF569Q5MCW4 686 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 SFMBT2Q5VUG0 894 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 HGSNATQ68CP4 663 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 GPAT2Q6NUI2 795 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 SWSAP1Q6NVH7 229 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 GBP6Q6ZN66 633 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 HAUS6Q7Z4H7 955 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 ZNF710Q8N1W2 664 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 SPIRE2Q8WWL2 714 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 PAGR1Q9BTK6 254 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 PDLIM7Q9NR12 457 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 MRFAP1Q9Y605 127 aa19.71■□□□□ 0.75
HLA-DQB1-201ENST00000374943 KIF3CO14782 793 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 DGAT1O75907 488 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 PLEKP08567 350 aaPredicted RBP19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 PON1P27169 355 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 KIF11P52732 1056 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 VAV2P52735 878 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 PRKCEQ02156 737 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 FSTL1Q12841 308 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 TUBB2AQ13885 445 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 ASTE1Q2TB18 679 aaPredicted RBP19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 EAPPQ56P03 285 aaPredicted RBP19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 FAM102BQ5T8I3 360 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 KIAA1328Q86T90 577 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 MCPH1Q8NEM0 835 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 CEP170P1Q96L14 293 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 SH2D3AQ9BRG2 576 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 TUBB2BQ9BVA1 445 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 NLRC4Q9NPP4 1024 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 GPRC5CQ9NQ84 441 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 AIPL1Q9NZN9 384 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 RBPJLQ9UBG7 517 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 PLXNB2O15031 1838 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 SYNGAP1Q96PV0 1343 aa19.7■□□□□ 0.74
HLA-DQB1-201ENST00000374943 MAPK13O15264 365 aa19.69■□□□□ 0.74
HLA-DQB1-201ENST00000374943 KRT86O43790 486 aa19.69■□□□□ 0.74
HLA-DQB1-201ENST00000374943 ABL1P00519 1130 aa19.69■□□□□ 0.74
HLA-DQB1-201ENST00000374943 SERPING1P05155 500 aa19.69■□□□□ 0.74
HLA-DQB1-201ENST00000374943 EIF4A3P38919 411 aaKnown RBP19.69■□□□□ 0.74
HLA-DQB1-201ENST00000374943 CYP2J2P51589 502 aa19.69■□□□□ 0.74
HLA-DQB1-201ENST00000374943 PEX3P56589 373 aa19.69■□□□□ 0.74
HLA-DQB1-201ENST00000374943 SPA17Q15506 151 aa19.69■□□□□ 0.74
HLA-DQB1-201ENST00000374943 SLC9C1Q4G0N8 1177 aa19.69■□□□□ 0.74
HLA-DQB1-201ENST00000374943 XKR3Q5GH77 459 aa19.69■□□□□ 0.74
HLA-DQB1-201ENST00000374943 KLHDC7AQ5VTJ3 777 aa19.69■□□□□ 0.74
HLA-DQB1-201ENST00000374943 TCERG1LQ5VWI1 586 aa19.69■□□□□ 0.74
HLA-DQB1-201ENST00000374943 SLC35F6Q8N357 371 aa19.69■□□□□ 0.74
HLA-DQB1-201ENST00000374943 EHBP1Q8NDI1 1231 aa19.69■□□□□ 0.74
HLA-DQB1-201ENST00000374943 JAKMIP2Q96AA8 810 aa19.69■□□□□ 0.74
HLA-DQB1-201ENST00000374943 NTPCRQ9BSD7 190 aaKnown RBP19.69■□□□□ 0.74
HLA-DQB1-201ENST00000374943 TSGA10Q9BZW7 698 aa19.69■□□□□ 0.74
HLA-DQB1-201ENST00000374943 TELO2Q9Y4R8 837 aa19.69■□□□□ 0.74
HLA-DQB1-201ENST00000374943 MAFBQ9Y5Q3 323 aaPredicted RBP19.69■□□□□ 0.74
HLA-DQB1-201ENST00000374943 IGKV6D-21A0A0A0MT36 114 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 ZNF263O14978 683 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 TLR2O60603 784 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 TGFB3P10600 412 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 SLC9A1P19634 815 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 GJA5P36382 358 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 SMTNP53814 917 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 MCCD1P59942 119 aaPredicted RBP19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 DMP1Q13316 513 aaPredicted RBP19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 SNAPC2Q13487 334 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 TMEM161BQ8NDZ6 487 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 GTF3C2Q8WUA4 911 aaPredicted RBP19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 MPHOSPH6Q99547 160 aaKnown RBP19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 TXNRD2Q9NNW7 524 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 CYP26B1Q9NR63 512 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 EXOC7Q9UPT5 735 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 DAAM1Q9Y4D1 1078 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 LOC102724159A0A0B4J2E5 919 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 CTAGE9A4FU28 777 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 RBAK-RBAKDNI3L0D1 243 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 EXOC3O60645 756 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 UCHL3P15374 230 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 UBA1P22314 1058 aaKnown RBP19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 PWP2Q15269 919 aaKnown RBP19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 CCDC122Q5T0U0 273 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 SEPT14Q6ZU15 432 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms