RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 JAK3P52333 1124 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 KCNB1Q14721 858 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 KNOP1Q1ED39 458 aaKnown RBP15.2■□□□□ 0.02
LMX1B-202ENST00000373474 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.2■□□□□ 0.02
LMX1B-202ENST00000373474 INO80BQ9C086 356 aaPredicted RBP15.2■□□□□ 0.02
LMX1B-202ENST00000373474 SMYD2Q9NRG4 433 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 TMEM260Q9NX78 707 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 ADD3Q9UEY8 706 aaKnown RBP15.2■□□□□ 0.02
LMX1B-202ENST00000373474 ZNF233A6NK53 670 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 TOM1L1O75674 476 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 NUGGCQ68CJ6 796 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 ATG9AQ7Z3C6 839 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 DPF2Q92785 391 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 FAM96AQ9H5X1 160 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 TRPC5Q9UL62 973 aaPredicted RBP15.2■□□□□ 0.02
LMX1B-202ENST00000373474 DLC1Q96QB1 1528 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 RABL6Q3YEC7 729 aaPredicted RBP15.2■□□□□ 0.02
LMX1B-202ENST00000373474 PIGOQ8TEQ8 1089 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 EPC1Q9H2F5 836 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 PPP2R2AP63151 447 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 CAPRIN2Q6IMN6 1127 aaKnown RBP15.19■□□□□ 0.02
LMX1B-202ENST00000373474 SYT2Q8N9I0 419 aaPredicted RBP15.19■□□□□ 0.02
LMX1B-202ENST00000373474 GPR101Q96P66 508 aaPredicted RBP15.19■□□□□ 0.02
LMX1B-202ENST00000373474 ORC4O43929 436 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 CD58P19256 250 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 KCTD2Q14681 263 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 OR6B2Q6IFH4 312 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 FGD4Q96M96 766 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 MSTO1Q9BUK6 570 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 PAIP2BQ9ULR5 123 aaKnown RBP15.19■□□□□ 0.02
LMX1B-202ENST00000373474 PLEKHG2Q9H7P9 1386 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 UTYO14607 1347 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 A0A1B0GTH6 734 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 PEX3P56589 373 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 SPARCL1Q14515 664 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 WDR24Q96S15 920 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 TAF1DQ9H5J8 278 aaPredicted RBP15.19■□□□□ 0.02
LMX1B-202ENST00000373474 SAYSD1Q9NPB0 183 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 TEKT2Q9UIF3 430 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 ITIH6Q6UXX5 1313 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 CFAP73A6NFT4 308 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 HNRNPCP07910 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
LMX1B-202ENST00000373474 PRDX5P30044 214 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 PCGF5Q86SE9 256 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 NXF1Q9UBU9 619 aaKnown RBP15.19■□□□□ 0.02
LMX1B-202ENST00000373474 WDR91A4D1P6 747 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 LDHAP00338 332 aaKnown RBP15.19■□□□□ 0.02
LMX1B-202ENST00000373474 CA4P22748 312 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 HDLBPQ00341 1268 aaKnown RBP15.19■□□□□ 0.02
LMX1B-202ENST00000373474 BBS9Q3SYG4 887 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 GUF1Q8N442 669 aaKnown RBP15.19■□□□□ 0.02
LMX1B-202ENST00000373474 CCNYQ8ND76 341 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 STAMBPL1Q96FJ0 436 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 FAM20AQ96MK3 541 aa15.19■□□□□ 0.02
LMX1B-202ENST00000373474 LMTK2Q8IWU2 1503 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 CCDC159P0C7I6 412 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 KRT4P19013 534 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 RBM41Q96IZ5 413 aaKnown RBP15.18■□□□□ 0.02
LMX1B-202ENST00000373474 APOL6Q9BWW8 343 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 PITPNM3Q9BZ71 974 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 GINM1Q9NU53 330 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 DNAJC17Q9NVM6 304 aaKnown RBP15.18■□□□□ 0.02
LMX1B-202ENST00000373474 CNOT8Q9UFF9 292 aaKnown RBP15.18■□□□□ 0.02
LMX1B-202ENST00000373474 MROH7-TTC4A0A0A0MT08 1334 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 SPATA31A3Q5VYP0 1347 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 GMNCA6NCL1 334 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 GFAPP14136 432 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 NR1H3Q13133 447 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 BEND6Q5SZJ8 279 aaPredicted RBP15.18■□□□□ 0.02
LMX1B-202ENST00000373474 ERICH1Q86X53 443 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 RNF169Q8NCN4 708 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 ANAPC7Q9UJX3 599 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 AXIN2Q9Y2T1 843 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 SERPINI2O75830 405 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 MAGOHP61326 146 aaKnown RBP15.18■□□□□ 0.02
LMX1B-202ENST00000373474 E4F1Q66K89 784 aaPredicted RBP15.18■□□□□ 0.02
LMX1B-202ENST00000373474 FBXL13Q8NEE6 735 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 DCPSQ96C86 337 aaKnown RBP15.18■□□□□ 0.02
LMX1B-202ENST00000373474 INTS2Q9H0H0 1204 aaKnown RBP15.18■□□□□ 0.02
LMX1B-202ENST00000373474 ZWILCHQ9H900 591 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.18■□□□□ 0.02
LMX1B-202ENST00000373474 SNX5Q9Y5X3 404 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 HNRNPCL2B2RXH8 293 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 HNRNPCL1O60812 293 aaKnown RBP15.18■□□□□ 0.02
LMX1B-202ENST00000373474 GUCY1A2P33402 732 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 NAALADL2Q58DX5 795 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 NLRP14Q86W24 1093 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 PDIK1LQ8N165 341 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 SYNE4Q8N205 404 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 ATP6V1G3Q96LB4 118 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 COL15A1P39059 1388 aa15.18■□□□□ 0.02
LMX1B-202ENST00000373474 PP2D1A8MPX8 630 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 NPR1P16066 1061 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 PSMA2P25787 234 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 MDM2Q00987 491 aaPredicted RBP15.17■□□□□ 0.02
LMX1B-202ENST00000373474 MYO1EQ12965 1108 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 DYDC2Q96IM9 177 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 ERCC6L2Q5T890 1561 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 KRT39Q6A163 491 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 POTEB3A0JP26 581 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms