RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 PCDHGC5Q9Y5F6 944 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 MROH5Q6ZUA9 1318 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 TCP11X1B4DZS4 312 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 DDAH1O94760 285 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 ZBTB48P10074 688 aaPredicted RBP5.88□□□□□ -1.47
ATG4A-204ENST00000372246 TNNI2P48788 182 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 SNAP25P60880 206 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 NCALDP61601 193 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 COASYQ13057 564 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 MPP2Q14168 576 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 TRIP13Q15645 432 aaPredicted RBP5.88□□□□□ -1.47
ATG4A-204ENST00000372246 FIGNQ5HY92 759 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 HP1BP3Q5SSJ5 553 aaPredicted RBP5.88□□□□□ -1.47
ATG4A-204ENST00000372246 CNNM4Q6P4Q7 775 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 RINLQ6ZS11 566 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 PEX26Q7Z412 305 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 IRF2BP2Q7Z5L9 587 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 PHLDB2Q86SQ0 1253 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 GLYCTKQ8IVS8 523 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 FAM114A1Q8IWE2 563 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 LRRC57Q8N9N7 239 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 ALG3Q92685 438 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 KRT35Q92764 455 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 MRRFQ96E11 262 aaKnown RBP5.88□□□□□ -1.47
ATG4A-204ENST00000372246 CDK5RAP3Q96JB5 506 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 BTBD6Q96KE9 485 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 FAM84BQ96KN1 310 aaPredicted RBP5.88□□□□□ -1.47
ATG4A-204ENST00000372246 TMEM47Q9BQJ4 181 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 ATP6V0A4Q9HBG4 840 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 C15orf41Q9Y2V0 281 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.88□□□□□ -1.47
ATG4A-204ENST00000372246 DUOX1Q9NRD9 1551 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 RSPH10B2B2RC85 870 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 PGRMC1O00264 195 aaKnown RBP5.88□□□□□ -1.47
ATG4A-204ENST00000372246 ACSL3O95573 720 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 STARD3NLO95772 234 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 LINGO3P0C6S8 592 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 RSPH10BP0C881 870 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 SLC16A2P36021 539 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 TRAPPC10P48553 1259 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 VPS41P49754 854 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 PSMC6P62333 389 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 MGAT5Q09328 741 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 KCNH2Q12809 1159 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 MTM1Q13496 603 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 CRYMQ14894 314 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 DAB2IPQ5VWQ8 1189 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 ZNF746Q6NUN9 644 aaPredicted RBP5.88□□□□□ -1.47
ATG4A-204ENST00000372246 ALKBH5Q6P6C2 394 aaKnown RBP5.88□□□□□ -1.47
ATG4A-204ENST00000372246 TRMT1LQ7Z2T5 733 aaKnown RBP5.88□□□□□ -1.47
ATG4A-204ENST00000372246 TRPM8Q7Z2W7 1104 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 ANKLE1Q8NAG6 615 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 TPCN2Q8NHX9 752 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 TGFBRAP1Q8WUH2 860 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 NSUN4Q96CB9 384 aaKnown RBP5.88□□□□□ -1.47
ATG4A-204ENST00000372246 FAM84AQ96KN4 292 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 SPAG5Q96R06 1193 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 FAM129AQ9BZQ8 928 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 ACTR5Q9H9F9 607 aaPredicted RBP5.88□□□□□ -1.47
ATG4A-204ENST00000372246 MKNK2Q9HBH9 465 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 BARHL2Q9NY43 387 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 ANAPC4Q9UJX5 808 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 NAGPAQ9UK23 515 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 COL4A3BPQ9Y5P4 624 aa5.88□□□□□ -1.47
ATG4A-204ENST00000372246 RPTORQ8N122 1335 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 ATXN2Q99700 1313 aaKnown RBP5.87□□□□□ -1.47
ATG4A-204ENST00000372246 MYH7BA7E2Y1 1941 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 MYH1P12882 1939 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 A0A1B0GUA9 196 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 C5orf60A6NFR6 353 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 USP17L5A8MUK1 530 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 POTECB2RU33 542 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 ERVV-2B6SEH9 535 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 DDX3XO00571 662 aaKnown RBP eCLIP5.87□□□□□ -1.47
ATG4A-204ENST00000372246 SOCS7O14512 581 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 PPP1R12AO14974 1030 aaPredicted RBP5.87□□□□□ -1.47
ATG4A-204ENST00000372246 IL2RBP14784 551 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 GM2AP17900 193 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 RFC4P35249 363 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 EPS15P42566 896 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 USP11P51784 963 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 SESN3P58005 492 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 ADAM9Q13443 819 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 NONOQ15233 471 aaKnown RBP eCLIP5.87□□□□□ -1.47
ATG4A-204ENST00000372246 CALCRLQ16602 461 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 LACTB2Q53H82 288 aaPredicted RBP5.87□□□□□ -1.47
ATG4A-204ENST00000372246 HERC4Q5GLZ8 1057 aaPredicted RBP5.87□□□□□ -1.47
ATG4A-204ENST00000372246 EMC10Q5UCC4 262 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 TTC27Q6P3X3 843 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 ZDHHC24Q6UX98 284 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 NEK8Q86SG6 692 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 CCDC84Q86UT8 332 aaPredicted RBP5.87□□□□□ -1.47
ATG4A-204ENST00000372246 LRRC47Q8N1G4 583 aaKnown RBP5.87□□□□□ -1.47
ATG4A-204ENST00000372246 FITM2Q8N6M3 262 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 RDH13Q8NBN7 331 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 PHC3Q8NDX5 983 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 CALML4Q96GE6 196 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 CALR3Q96L12 384 aaKnown RBP5.87□□□□□ -1.47
ATG4A-204ENST00000372246 FMO2Q99518 471 aa5.87□□□□□ -1.47
ATG4A-204ENST00000372246 GANQ9H2C0 597 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms