RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 CCDC175P0C221 793 aa14.27□□□□□ -0.13
LDB3-203ENST00000372056 MYBP10242 640 aa14.27□□□□□ -0.13
LDB3-203ENST00000372056 MAPTP10636 758 aaKnown RBP14.27□□□□□ -0.13
LDB3-203ENST00000372056 TRIM21P19474 475 aaKnown RBP14.27□□□□□ -0.13
LDB3-203ENST00000372056 KLK7P49862 253 aa14.27□□□□□ -0.13
LDB3-203ENST00000372056 ZNF131P52739 623 aa14.27□□□□□ -0.13
LDB3-203ENST00000372056 MARSP56192 900 aaKnown RBP14.27□□□□□ -0.13
LDB3-203ENST00000372056 ETF1P62495 437 aaKnown RBP14.27□□□□□ -0.13
LDB3-203ENST00000372056 TRIM65Q6PJ69 517 aa14.27□□□□□ -0.13
LDB3-203ENST00000372056 PLPPR4Q7Z2D5 763 aa14.27□□□□□ -0.13
LDB3-203ENST00000372056 IQCDQ96DY2 449 aa14.27□□□□□ -0.13
LDB3-203ENST00000372056 DRC1Q96MC2 740 aa14.27□□□□□ -0.13
LDB3-203ENST00000372056 JPH2Q9BR39 696 aaPredicted RBP14.27□□□□□ -0.13
LDB3-203ENST00000372056 BCAS3Q9H6U6 928 aa14.27□□□□□ -0.13
LDB3-203ENST00000372056 MRPL44Q9H9J2 332 aaKnown RBP14.27□□□□□ -0.13
LDB3-203ENST00000372056 ZNF302Q9NR11 478 aa14.27□□□□□ -0.13
LDB3-203ENST00000372056 TRAF3IP3Q9Y228 551 aa14.27□□□□□ -0.13
LDB3-203ENST00000372056 SIK3Q9Y2K2 1263 aa14.27□□□□□ -0.13
LDB3-203ENST00000372056 Q9Y3F1 56 aa14.27□□□□□ -0.13
LDB3-203ENST00000372056 MAFBQ9Y5Q3 323 aaPredicted RBP14.27□□□□□ -0.13
LDB3-203ENST00000372056 ADGRG1Q9Y653 693 aa14.27□□□□□ -0.13
LDB3-203ENST00000372056 A0A1W2PQJ5 194 aa14.26□□□□□ -0.13
LDB3-203ENST00000372056 PDXKO00764 312 aa14.26□□□□□ -0.13
LDB3-203ENST00000372056 BACH1O14867 736 aa14.26□□□□□ -0.13
LDB3-203ENST00000372056 FAM13AO94988 1023 aa14.26□□□□□ -0.13
LDB3-203ENST00000372056 GGPS1O95749 300 aa14.26□□□□□ -0.13
LDB3-203ENST00000372056 SYT10Q6XYQ8 523 aa14.26□□□□□ -0.13
LDB3-203ENST00000372056 MCPH1Q8NEM0 835 aa14.26□□□□□ -0.13
LDB3-203ENST00000372056 PARVGQ9HBI0 331 aa14.26□□□□□ -0.13
LDB3-203ENST00000372056 LARSQ9P2J5 1176 aaKnown RBP14.26□□□□□ -0.13
LDB3-203ENST00000372056 LRRC37A2A6NM11 1700 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 SFI1A8K8P3 1242 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 H0YCG3 227 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 EIF3DO15371 548 aaKnown RBP eCLIP14.25□□□□□ -0.13
LDB3-203ENST00000372056 GAS2O43903 313 aaKnown RBP14.25□□□□□ -0.13
LDB3-203ENST00000372056 DGAT1O75907 488 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 GCNT3O95395 438 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 ACVR2BQ13705 512 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 CCDC40Q4G0X9 1142 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 SWSAP1Q6NVH7 229 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 SMARCAD1Q9H4L7 1026 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 POLD4Q9HCU8 107 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 SAGE1Q9NXZ1 904 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 GABBR1Q9UBS5 961 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 EMSYQ7Z589 1322 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 IGSF9BQ9UPX0 1349 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 LGR5O75473 907 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 PRPF6O94906 941 aaKnown RBP14.25□□□□□ -0.13
LDB3-203ENST00000372056 NR2F2P24468 414 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 RARRES1P49788 294 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 STAT5BP51692 787 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 ZBED6P86452 979 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 SP2Q02086 613 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 SP3Q02447 781 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 ADAM9Q13443 819 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 MEA1Q16626 185 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 DUSP28Q4G0W2 176 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 BRDTQ58F21 947 aaPredicted RBP14.25□□□□□ -0.13
LDB3-203ENST00000372056 TAPT1Q6NXT6 567 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 TRIM59Q8IWR1 403 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 MYCT1Q8N699 235 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 PKNOX2Q96KN3 472 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 PCMTD1Q96MG8 357 aaPredicted RBP14.25□□□□□ -0.13
LDB3-203ENST00000372056 FIZ1Q96SL8 496 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 NIFKQ9BYG3 293 aaKnown RBP14.25□□□□□ -0.13
LDB3-203ENST00000372056 ZMYND15Q9H091 742 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 AGPAT5Q9NUQ2 364 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 TYW1Q9NV66 732 aaKnown RBP14.25□□□□□ -0.13
LDB3-203ENST00000372056 UBE4BO95155 1302 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 PHLPP2Q6ZVD8 1323 aa14.25□□□□□ -0.13
LDB3-203ENST00000372056 CETN3O15182 167 aa14.24□□□□□ -0.13
LDB3-203ENST00000372056 PPFIA4O75335 1185 aa14.24□□□□□ -0.13
LDB3-203ENST00000372056 SNAI1O95863 264 aaPredicted RBP14.24□□□□□ -0.13
LDB3-203ENST00000372056 RFC5P40937 340 aa14.24□□□□□ -0.13
LDB3-203ENST00000372056 PRMT2P55345 433 aa14.24□□□□□ -0.13
LDB3-203ENST00000372056 RTP1P59025 263 aa14.24□□□□□ -0.13
LDB3-203ENST00000372056 LACTBP83111 547 aaPredicted RBP14.24□□□□□ -0.13
LDB3-203ENST00000372056 MAPK7Q13164 816 aa14.24□□□□□ -0.13
LDB3-203ENST00000372056 WDR59Q6PJI9 974 aa14.24□□□□□ -0.13
LDB3-203ENST00000372056 PADI6Q6TGC4 694 aa14.24□□□□□ -0.13
LDB3-203ENST00000372056 PPTC7Q8NI37 304 aa14.24□□□□□ -0.13
LDB3-203ENST00000372056 BBXQ8WY36 941 aaPredicted RBP14.24□□□□□ -0.13
LDB3-203ENST00000372056 KIFAP3Q92845 792 aa14.24□□□□□ -0.13
LDB3-203ENST00000372056 SPATA33Q96N06 139 aa14.24□□□□□ -0.13
LDB3-203ENST00000372056 GJD2Q9UKL4 321 aa14.24□□□□□ -0.13
LDB3-203ENST00000372056 CTIFO43310 598 aaKnown RBP14.23□□□□□ -0.13
LDB3-203ENST00000372056 CALUO43852 315 aaPredicted RBP14.23□□□□□ -0.13
LDB3-203ENST00000372056 KCNA1Q09470 495 aa14.23□□□□□ -0.13
LDB3-203ENST00000372056 GRM1Q13255 1194 aa14.23□□□□□ -0.13
LDB3-203ENST00000372056 TSR1Q2NL82 804 aaKnown RBP14.23□□□□□ -0.13
LDB3-203ENST00000372056 XKR9Q5GH70 373 aa14.23□□□□□ -0.13
LDB3-203ENST00000372056 MFSD14CQ5VZR4 134 aa14.23□□□□□ -0.13
LDB3-203ENST00000372056 FBXO16Q8IX29 292 aaPredicted RBP14.23□□□□□ -0.13
LDB3-203ENST00000372056 DAW1Q8N136 415 aa14.23□□□□□ -0.13
LDB3-203ENST00000372056 CHP1Q99653 195 aa14.23□□□□□ -0.13
LDB3-203ENST00000372056 GPR20Q99678 358 aa14.23□□□□□ -0.13
LDB3-203ENST00000372056 PCDHB13Q9Y5F0 798 aa14.23□□□□□ -0.13
LDB3-203ENST00000372056 ZMYM2Q9UBW7 1377 aa14.23□□□□□ -0.13
LDB3-203ENST00000372056 GSTTP1A0A1W2PQM5 241 aa14.23□□□□□ -0.13
LDB3-203ENST00000372056 FANCGO15287 622 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms