RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 HARSP12081 509 aaKnown RBP12.82□□□□□ -0.36
PDE6C-201ENST00000371447 HNRNPH3P31942 346 aaKnown RBP12.82□□□□□ -0.36
PDE6C-201ENST00000371447 SSTR3P32745 418 aaPredicted RBP12.82□□□□□ -0.36
PDE6C-201ENST00000371447 COPB2P35606 906 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 SNRNP48Q6IEG0 339 aaKnown RBP12.82□□□□□ -0.36
PDE6C-201ENST00000371447 FRMD5Q7Z6J6 570 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 DAAM2Q86T65 1068 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 PSMD1Q99460 953 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 UBE2TQ9NPD8 197 aaPredicted RBP12.82□□□□□ -0.36
PDE6C-201ENST00000371447 EVI5O60447 810 aa12.81□□□□□ -0.36
PDE6C-201ENST00000371447 NPM3O75607 178 aaKnown RBP12.81□□□□□ -0.36
PDE6C-201ENST00000371447 EIF3JO75822 258 aaKnown RBP12.81□□□□□ -0.36
PDE6C-201ENST00000371447 CYP3A4P08684 503 aa12.81□□□□□ -0.36
PDE6C-201ENST00000371447 TUBB2AQ13885 445 aa12.81□□□□□ -0.36
PDE6C-201ENST00000371447 HLTFQ14527 1009 aaKnown RBP eCLIP12.81□□□□□ -0.36
PDE6C-201ENST00000371447 ASTE1Q2TB18 679 aaPredicted RBP12.81□□□□□ -0.36
PDE6C-201ENST00000371447 CYFIP1Q7L576 1253 aa12.81□□□□□ -0.36
PDE6C-201ENST00000371447 ZNF668Q96K58 619 aaPredicted RBP12.81□□□□□ -0.36
PDE6C-201ENST00000371447 TUBB2BQ9BVA1 445 aa12.81□□□□□ -0.36
PDE6C-201ENST00000371447 RNF146Q9NTX7 359 aa12.81□□□□□ -0.36
PDE6C-201ENST00000371447 LTBP1Q14766 1721 aa12.81□□□□□ -0.36
PDE6C-201ENST00000371447 STAT1P42224 750 aa12.81□□□□□ -0.36
PDE6C-201ENST00000371447 MAP2K1Q02750 393 aaPredicted RBP12.81□□□□□ -0.36
PDE6C-201ENST00000371447 EPHA7Q15375 998 aa12.81□□□□□ -0.36
PDE6C-201ENST00000371447 EPM2AIP1Q7L775 607 aaPredicted RBP12.81□□□□□ -0.36
PDE6C-201ENST00000371447 IRF2BP2Q7Z5L9 587 aa12.81□□□□□ -0.36
PDE6C-201ENST00000371447 PALB2Q86YC2 1186 aa12.81□□□□□ -0.36
PDE6C-201ENST00000371447 DAW1Q8N136 415 aa12.81□□□□□ -0.36
PDE6C-201ENST00000371447 CLEC4DQ8WXI8 215 aa12.81□□□□□ -0.36
PDE6C-201ENST00000371447 SELENOOQ9BVL4 669 aa12.81□□□□□ -0.36
PDE6C-201ENST00000371447 TUFT1Q9NNX1 390 aa12.81□□□□□ -0.36
PDE6C-201ENST00000371447 TAS2R14Q9NYV8 317 aa12.81□□□□□ -0.36
PDE6C-201ENST00000371447 EMSYQ7Z589 1322 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 KRT13P13646 458 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 YWHABP31946 246 aaKnown RBP12.8□□□□□ -0.36
PDE6C-201ENST00000371447 MMP14P50281 582 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 CDK17Q00537 523 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 MYL7Q01449 175 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 WDR78Q5VTH9 848 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 PPP4R3CPQ6ZMV5 832 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 PPM1KQ8N3J5 372 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 EPB41L5Q9HCM4 733 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 PICK1Q9NRD5 415 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 LARSQ9P2J5 1176 aaKnown RBP12.8□□□□□ -0.36
PDE6C-201ENST00000371447 NAGPAQ9UK23 515 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 RAB21Q9UL25 225 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 SSU72P8A0A1W2PR75 194 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 ZBED4O75132 1171 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 FMO5P49326 533 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 PPP2R5CQ13362 524 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 AGBL3Q8NEM8 1001 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 BICD1Q96G01 975 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 NFU1Q9UMS0 254 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 ANO9A1A5B4 782 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 GRID2IPA4D2P6 1211 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 PHF20L1A8MW92 1017 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 NFKBIEO00221 500 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 ATMINO43313 823 aaPredicted RBP12.8□□□□□ -0.36
PDE6C-201ENST00000371447 GAP43P17677 238 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 GGCXP38435 758 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 QARSP47897 775 aaKnown RBP12.8□□□□□ -0.36
PDE6C-201ENST00000371447 TRAF1Q13077 416 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 ZNF211Q13398 564 aaPredicted RBP12.8□□□□□ -0.36
PDE6C-201ENST00000371447 RPS6KA1Q15418 735 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 EPC2Q52LR7 807 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 KCTD16Q68DU8 428 aa12.8□□□□□ -0.36
PDE6C-201ENST00000371447 DDX42Q86XP3 938 aaKnown RBP eCLIP12.8□□□□□ -0.36
PDE6C-201ENST00000371447 METTL14Q9HCE5 456 aaKnown RBP12.8□□□□□ -0.36
PDE6C-201ENST00000371447 TOPORSQ9NS56 1045 aaPredicted RBP12.8□□□□□ -0.36
PDE6C-201ENST00000371447 NRXN2Q9P2S2 1712 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 ANKRD65E5RJM6 399 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 FOXN3O00409 490 aaPredicted RBP12.79□□□□□ -0.36
PDE6C-201ENST00000371447 CAPN2P17655 700 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 TCP1P17987 556 aaKnown RBP12.79□□□□□ -0.36
PDE6C-201ENST00000371447 PTGER2P43116 358 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 CFAP221Q4G0U5 840 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 MCTP2Q6DN12 878 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 SWSAP1Q6NVH7 229 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 PEX26Q7Z412 305 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 HAUS6Q7Z4H7 955 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 VPS36Q86VN1 386 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 SLC20A1Q8WUM9 679 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 CEP170P1Q96L14 293 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 FAM53CQ9NYF3 392 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 GABBR1Q9UBS5 961 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 LRRC37AA6NMS7 1700 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 ZMYM2Q9UBW7 1377 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 P4HBP07237 508 aaKnown RBP12.79□□□□□ -0.36
PDE6C-201ENST00000371447 GLI1P08151 1106 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 RARRES1P49788 294 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 NAB2Q15742 525 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 C2CD6Q53TS8 623 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 CNKSR2Q8WXI2 1034 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 INTS2Q9H0H0 1204 aaKnown RBP12.79□□□□□ -0.36
PDE6C-201ENST00000371447 KCNG1Q9UIX4 513 aa12.79□□□□□ -0.36
PDE6C-201ENST00000371447 DDX3XO00571 662 aaKnown RBP eCLIP12.78□□□□□ -0.36
PDE6C-201ENST00000371447 HEXIM1O94992 359 aaKnown RBP12.78□□□□□ -0.36
PDE6C-201ENST00000371447 CCNE2O96020 404 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 H2AFZP0C0S5 128 aa12.78□□□□□ -0.36
PDE6C-201ENST00000371447 TNFAIP3P21580 790 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms