RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 TMEM143Q96AN5 459 aa17.7■□□□□ 0.42
PFDN4-201ENST00000371419 UBE2OQ9C0C9 1292 aaKnown RBP17.7■□□□□ 0.42
PFDN4-201ENST00000371419 XPNPEP1Q9NQW7 623 aa17.7■□□□□ 0.42
PFDN4-201ENST00000371419 TCHHQ07283 1943 aa17.7■□□□□ 0.42
PFDN4-201ENST00000371419 LOXHD1Q8IVV2 1947 aa17.7■□□□□ 0.42
PFDN4-201ENST00000371419 NBNO60934 754 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 PLA2G4BP0C869 781 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 CYP11B2P19099 503 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 BMP8BP34820 402 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 EPHB4P54760 987 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 NLRP11P59045 1033 aaKnown RBP17.69■□□□□ 0.42
PFDN4-201ENST00000371419 KIZQ2M2Z5 673 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 SHC4Q6S5L8 630 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 SYT2Q8N9I0 419 aaPredicted RBP17.69■□□□□ 0.42
PFDN4-201ENST00000371419 TMEM87AQ8NBN3 555 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 PSPC1Q8WXF1 523 aaKnown RBP17.69■□□□□ 0.42
PFDN4-201ENST00000371419 GINS2Q9Y248 185 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 SCN5AQ14524 2016 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 GPR32O75388 356 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 CXCL10P02778 98 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 SSBP05455 408 aaKnown RBP eCLIP17.69■□□□□ 0.42
PFDN4-201ENST00000371419 ACRP10323 421 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 GPC3P51654 580 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 CRYBB1P53674 252 aaPredicted RBP17.69■□□□□ 0.42
PFDN4-201ENST00000371419 FBXO47Q5MNV8 452 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 L1TD1Q5T7N2 865 aaKnown RBP17.69■□□□□ 0.42
PFDN4-201ENST00000371419 RRAGBQ5VZM2 374 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 PSRC1Q6PGN9 363 aaPredicted RBP17.69■□□□□ 0.42
PFDN4-201ENST00000371419 CHRDL2Q6WN34 429 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 CCDC73Q6ZRK6 1079 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 C16orf59Q7L2K0 433 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 RHPN2Q8IUC4 686 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 PRPF31Q8WWY3 499 aaKnown RBP17.69■□□□□ 0.42
PFDN4-201ENST00000371419 VWCEQ96DN2 955 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 PPP1R16BQ96T49 567 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 GZF1Q9H116 711 aaPredicted RBP17.69■□□□□ 0.42
PFDN4-201ENST00000371419 ADAMTS10Q9H324 1103 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 GDPD2Q9HCC8 539 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 COL4A3BPQ9Y5P4 624 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 SQORQ9Y6N5 450 aa17.69■□□□□ 0.42
PFDN4-201ENST00000371419 RANBP2P49792 3224 aaKnown RBP17.68■□□□□ 0.42
PFDN4-201ENST00000371419 ASAP2O43150 1006 aa17.68■□□□□ 0.42
PFDN4-201ENST00000371419 GHRP10912 638 aa17.68■□□□□ 0.42
PFDN4-201ENST00000371419 SLC12A3P55017 1021 aa17.68■□□□□ 0.42
PFDN4-201ENST00000371419 MXD4Q14582 209 aaPredicted RBP17.68■□□□□ 0.42
PFDN4-201ENST00000371419 RESP18Q5W5W9 173 aa17.68■□□□□ 0.42
PFDN4-201ENST00000371419 ADALQ6DHV7 355 aa17.68■□□□□ 0.42
PFDN4-201ENST00000371419 RINT1Q6NUQ1 792 aa17.68■□□□□ 0.42
PFDN4-201ENST00000371419 MAEAQ7L5Y9 396 aa17.68■□□□□ 0.42
PFDN4-201ENST00000371419 USP38Q8NB14 1042 aa17.68■□□□□ 0.42
PFDN4-201ENST00000371419 LRRC15Q8TF66 581 aa17.68■□□□□ 0.42
PFDN4-201ENST00000371419 NLRP7Q8WX94 980 aa17.68■□□□□ 0.42
PFDN4-201ENST00000371419 RAD54LQ92698 747 aa17.68■□□□□ 0.42
PFDN4-201ENST00000371419 SCLT1Q96NL6 688 aa17.68■□□□□ 0.42
PFDN4-201ENST00000371419 PANK2Q9BZ23 570 aa17.68■□□□□ 0.42
PFDN4-201ENST00000371419 CDHR5Q9HBB8 845 aa17.68■□□□□ 0.42
PFDN4-201ENST00000371419 BLOC1S4Q9NUP1 217 aa17.68■□□□□ 0.42
PFDN4-201ENST00000371419 FAM13BQ9NYF5 915 aa17.68■□□□□ 0.42
PFDN4-201ENST00000371419 STK17AQ9UEE5 414 aa17.68■□□□□ 0.42
PFDN4-201ENST00000371419 FGBP02675 491 aa17.67■□□□□ 0.42
PFDN4-201ENST00000371419 ARL2P36404 184 aa17.67■□□□□ 0.42
PFDN4-201ENST00000371419 STAT6P42226 847 aa17.67■□□□□ 0.42
PFDN4-201ENST00000371419 LAMTOR4Q0VGL1 99 aa17.67■□□□□ 0.42
PFDN4-201ENST00000371419 LPIN1Q14693 890 aa17.67■□□□□ 0.42
PFDN4-201ENST00000371419 TMEM240Q5SV17 173 aa17.67■□□□□ 0.42
PFDN4-201ENST00000371419 FAM102BQ5T8I3 360 aa17.67■□□□□ 0.42
PFDN4-201ENST00000371419 TSHZ1Q6ZSZ6 1077 aa17.67■□□□□ 0.42
PFDN4-201ENST00000371419 C1orf186Q6ZWK4 172 aa17.67■□□□□ 0.42
PFDN4-201ENST00000371419 ZNF365Q70YC5 407 aa17.67■□□□□ 0.42
PFDN4-201ENST00000371419 ZNF410Q86VK4 478 aa17.67■□□□□ 0.42
PFDN4-201ENST00000371419 KSR1Q8IVT5 923 aa17.67■□□□□ 0.42
PFDN4-201ENST00000371419 LARP4BQ92615 738 aaKnown RBP17.67■□□□□ 0.42
PFDN4-201ENST00000371419 OSMRQ99650 979 aa17.67■□□□□ 0.42
PFDN4-201ENST00000371419 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.67■□□□□ 0.425e-9■■■□□ 16.2
PFDN4-201ENST00000371419 OSBPL7Q9BZF2 842 aa17.67■□□□□ 0.42
PFDN4-201ENST00000371419 POLR3FQ9H1D9 316 aaPredicted RBP17.67■□□□□ 0.42
PFDN4-201ENST00000371419 KCND2Q9NZV8 630 aa17.67■□□□□ 0.42
PFDN4-201ENST00000371419 PLEKHG4Q58EX7 1191 aa17.66■□□□□ 0.42
PFDN4-201ENST00000371419 CNKSR3Q6P9H4 555 aa17.66■□□□□ 0.42
PFDN4-201ENST00000371419 PDILTQ8N807 584 aa17.66■□□□□ 0.42
PFDN4-201ENST00000371419 TET1Q8NFU7 2136 aa17.66■□□□□ 0.42
PFDN4-201ENST00000371419 SEPT8Q92599 483 aa17.66■□□□□ 0.42
PFDN4-201ENST00000371419 ZNF668Q96K58 619 aaPredicted RBP17.66■□□□□ 0.42
PFDN4-201ENST00000371419 NLRP4Q96MN2 994 aa17.66■□□□□ 0.42
PFDN4-201ENST00000371419 RUSC1Q9BVN2 902 aa17.66■□□□□ 0.42
PFDN4-201ENST00000371419 TIPINQ9BVW5 301 aa17.66■□□□□ 0.42
PFDN4-201ENST00000371419 IFIH1Q9BYX4 1025 aaKnown RBP17.66■□□□□ 0.42
PFDN4-201ENST00000371419 GCOM2Q9BZD3 368 aaPredicted RBP17.66■□□□□ 0.42
PFDN4-201ENST00000371419 PRO3102Q9H379 93 aa17.66■□□□□ 0.42
PFDN4-201ENST00000371419 GPRC5CQ9NQ84 441 aa17.66■□□□□ 0.42
PFDN4-201ENST00000371419 SIP14410 1827 aa17.65■□□□□ 0.42
PFDN4-201ENST00000371419 A0A087WZ62 844 aa17.65■□□□□ 0.42
PFDN4-201ENST00000371419 A0A087X0B3 334 aa17.65■□□□□ 0.42
PFDN4-201ENST00000371419 GOLGA6L3A6NEY3 463 aa17.65■□□□□ 0.42
PFDN4-201ENST00000371419 SRGAP2CP0DJJ0 459 aa17.65■□□□□ 0.42
PFDN4-201ENST00000371419 ACTN1P12814 892 aa17.65■□□□□ 0.42
PFDN4-201ENST00000371419 EIF4BP23588 611 aaKnown RBP17.65■□□□□ 0.42
PFDN4-201ENST00000371419 CMA1P23946 247 aa17.65■□□□□ 0.42
PFDN4-201ENST00000371419 GUCY2CP25092 1073 aa17.65■□□□□ 0.42
PFDN4-201ENST00000371419 DHX8Q14562 1220 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms