RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 GHRHRQ02643 423 aa31.55■■■□□ 2.64
SSBP3-204ENST00000371320 ITGB3BPQ13352 177 aaPredicted RBP31.55■■■□□ 2.64
SSBP3-204ENST00000371320 TAF4BQ92750 862 aa31.55■■■□□ 2.64
SSBP3-204ENST00000371320 NENFQ9UMX5 172 aa31.55■■■□□ 2.64
SSBP3-204ENST00000371320 ZHX2Q9Y6X8 837 aa31.55■■■□□ 2.64
SSBP3-204ENST00000371320 K7ENM7 598 aa31.54■■■□□ 2.64
SSBP3-204ENST00000371320 EXOC3O60645 756 aa31.54■■■□□ 2.64
SSBP3-204ENST00000371320 CBWD6Q4V339 395 aa31.54■■■□□ 2.64
SSBP3-204ENST00000371320 CBWD3Q5JTY5 395 aa31.54■■■□□ 2.64
SSBP3-204ENST00000371320 CBWD5Q5RIA9 395 aa31.54■■■□□ 2.64
SSBP3-204ENST00000371320 DNAAF5Q86Y56 855 aa31.54■■■□□ 2.64
SSBP3-204ENST00000371320 SLC9A9Q8IVB4 645 aa31.54■■■□□ 2.64
SSBP3-204ENST00000371320 STK33Q9BYT3 514 aa31.54■■■□□ 2.64
SSBP3-204ENST00000371320 SLC38A10Q9HBR0 1119 aa31.54■■■□□ 2.64
SSBP3-204ENST00000371320 LARSQ9P2J5 1176 aaKnown RBP31.54■■■□□ 2.64
SSBP3-204ENST00000371320 TRIM49P0CI25 452 aa31.53■■■□□ 2.64
SSBP3-204ENST00000371320 TRIM49CP0CI26 452 aa31.53■■■□□ 2.64
SSBP3-204ENST00000371320 SOX5P35711 763 aa31.53■■■□□ 2.64
SSBP3-204ENST00000371320 RPS6KA1Q15418 735 aa31.53■■■□□ 2.64
SSBP3-204ENST00000371320 SYTL5Q8TDW5 730 aaPredicted RBP31.53■■■□□ 2.64
SSBP3-204ENST00000371320 ATP8B3O60423 1300 aa31.53■■■□□ 2.64
SSBP3-204ENST00000371320 F8VZ95 297 aa31.53■■■□□ 2.64
SSBP3-204ENST00000371320 DDX3XO00571 662 aaKnown RBP eCLIP31.53■■■□□ 2.643e-8■■■□□ 15.9
SSBP3-204ENST00000371320 SYF2O95926 243 aaKnown RBP31.53■■■□□ 2.64
SSBP3-204ENST00000371320 H2AFZP0C0S5 128 aa31.53■■■□□ 2.64
SSBP3-204ENST00000371320 LMAN1P49257 510 aa31.53■■■□□ 2.64
SSBP3-204ENST00000371320 MRPS9P82933 396 aaKnown RBP31.53■■■□□ 2.64
SSBP3-204ENST00000371320 MTMR1Q13613 665 aa31.53■■■□□ 2.64
SSBP3-204ENST00000371320 MUM1L1Q5H9M0 696 aa31.53■■■□□ 2.64
SSBP3-204ENST00000371320 H2AFVQ71UI9 128 aa31.53■■■□□ 2.64
SSBP3-204ENST00000371320 INPP4AQ96PE3 977 aaPredicted RBP31.53■■■□□ 2.64
SSBP3-204ENST00000371320 DBR1Q9UK59 544 aaKnown RBP31.53■■■□□ 2.64
SSBP3-204ENST00000371320 DNAJC12Q9UKB3 198 aa31.53■■■□□ 2.64
SSBP3-204ENST00000371320 ZC3H4Q9UPT8 1303 aaKnown RBP31.53■■■□□ 2.64
SSBP3-204ENST00000371320 EVI5O60447 810 aa31.52■■■□□ 2.64
SSBP3-204ENST00000371320 DGKZQ13574 1117 aa31.52■■■□□ 2.64
SSBP3-204ENST00000371320 JDP2Q8WYK2 163 aa31.52■■■□□ 2.64
SSBP3-204ENST00000371320 TEPSINQ96N21 525 aa31.52■■■□□ 2.64
SSBP3-204ENST00000371320 INTS2Q9H0H0 1204 aaKnown RBP31.52■■■□□ 2.64
SSBP3-204ENST00000371320 QARSP47897 775 aaKnown RBP31.52■■■□□ 2.64
SSBP3-204ENST00000371320 TNFAIP1Q13829 316 aa31.52■■■□□ 2.64
SSBP3-204ENST00000371320 MYBPC2Q14324 1141 aa31.52■■■□□ 2.64
SSBP3-204ENST00000371320 SND1Q7KZF4 910 aaKnown RBP eCLIP31.52■■■□□ 2.64
SSBP3-204ENST00000371320 U2AF1L4Q8WU68 220 aaKnown RBP31.52■■■□□ 2.64
SSBP3-204ENST00000371320 INTUQ9ULD6 942 aa31.52■■■□□ 2.64
SSBP3-204ENST00000371320 MYL7Q01449 175 aa31.51■■■□□ 2.63
SSBP3-204ENST00000371320 BFSP1Q12934 665 aa31.51■■■□□ 2.63
SSBP3-204ENST00000371320 DRAP1Q14919 205 aaPredicted RBP31.51■■■□□ 2.63
SSBP3-204ENST00000371320 LRRC57Q8N9N7 239 aa31.51■■■□□ 2.63
SSBP3-204ENST00000371320 RDH13Q8NBN7 331 aa31.51■■■□□ 2.63
SSBP3-204ENST00000371320 MAP3K20Q9NYL2 800 aaKnown RBP31.51■■■□□ 2.63
SSBP3-204ENST00000371320 PIM2Q9P1W9 311 aa31.51■■■□□ 2.63
SSBP3-204ENST00000371320 RNF40O75150 1001 aa31.5■■■□□ 2.63
SSBP3-204ENST00000371320 EIF2AK2P19525 551 aaKnown RBP31.5■■■□□ 2.63
SSBP3-204ENST00000371320 TNFRSF8P28908 595 aa31.5■■■□□ 2.63
SSBP3-204ENST00000371320 RARRES1P49788 294 aa31.5■■■□□ 2.63
SSBP3-204ENST00000371320 TMEM206Q9H813 350 aa31.5■■■□□ 2.63
SSBP3-204ENST00000371320 TBC1D22BQ9NU19 505 aa31.5■■■□□ 2.63
SSBP3-204ENST00000371320 CTDP1Q9Y5B0 961 aaPredicted RBP31.5■■■□□ 2.63
SSBP3-204ENST00000371320 CES2O00748 559 aa31.5■■■□□ 2.63
SSBP3-204ENST00000371320 KCNK3O14649 394 aa31.5■■■□□ 2.63
SSBP3-204ENST00000371320 KIF4AO95239 1232 aa31.5■■■□□ 2.63
SSBP3-204ENST00000371320 MAPTP10636 758 aaKnown RBP31.5■■■□□ 2.63
SSBP3-204ENST00000371320 EPHB4P54760 987 aa31.5■■■□□ 2.63
SSBP3-204ENST00000371320 ALCAMQ13740 583 aa31.5■■■□□ 2.63
SSBP3-204ENST00000371320 TAAR1Q96RJ0 339 aa31.5■■■□□ 2.63
SSBP3-204ENST00000371320 LOXHD1Q8IVV2 1947 aa31.49■■■□□ 2.63
SSBP3-204ENST00000371320 GGCXP38435 758 aa31.49■■■□□ 2.63
SSBP3-204ENST00000371320 TPCN2Q8NHX9 752 aa31.49■■■□□ 2.63
SSBP3-204ENST00000371320 LMBR1Q8WVP7 490 aa31.49■■■□□ 2.63
SSBP3-204ENST00000371320 APEX2Q9UBZ4 518 aa31.49■■■□□ 2.63
SSBP3-204ENST00000371320 A0A0A6YYK5 440 aaPredicted RBP31.48■■■□□ 2.63
SSBP3-204ENST00000371320 CTNND1O60716 968 aaKnown RBP31.48■■■□□ 2.63
SSBP3-204ENST00000371320 KRT13P13646 458 aa31.48■■■□□ 2.63
SSBP3-204ENST00000371320 RNASE9P60153 205 aaKnown RBP31.48■■■□□ 2.63
SSBP3-204ENST00000371320 RPS6P62753 249 aaKnown RBP31.48■■■□□ 2.63
SSBP3-204ENST00000371320 CCDC43Q96MW1 224 aaKnown RBP31.48■■■□□ 2.63
SSBP3-204ENST00000371320 ACCSQ96QU6 501 aa31.48■■■□□ 2.63
SSBP3-204ENST00000371320 GINM1Q9NU53 330 aa31.48■■■□□ 2.63
SSBP3-204ENST00000371320 PPP1R9AQ9ULJ8 1098 aa31.48■■■□□ 2.63
SSBP3-204ENST00000371320 LYPLA2O95372 231 aa31.48■■■□□ 2.63
SSBP3-204ENST00000371320 EGFRP00533 1210 aa31.48■■■□□ 2.63
SSBP3-204ENST00000371320 PLS3P13797 630 aa31.48■■■□□ 2.63
SSBP3-204ENST00000371320 EMBQ6PCB8 327 aa31.48■■■□□ 2.63
SSBP3-204ENST00000371320 FMNL3Q8IVF7 1028 aa31.48■■■□□ 2.63
SSBP3-204ENST00000371320 IFT20Q8IY31 132 aa31.48■■■□□ 2.63
SSBP3-204ENST00000371320 SAMD3Q8N6K7 520 aa31.48■■■□□ 2.63
SSBP3-204ENST00000371320 SLC30A5Q8TAD4 765 aa31.48■■■□□ 2.63
SSBP3-204ENST00000371320 LNX1Q8TBB1 728 aaPredicted RBP31.48■■■□□ 2.63
SSBP3-204ENST00000371320 GOLPH3Q9H4A6 298 aa31.48■■■□□ 2.63
SSBP3-204ENST00000371320 GOLGA6BA6NDN3 693 aa31.47■■■□□ 2.63
SSBP3-204ENST00000371320 LMNB1P20700 586 aa31.47■■■□□ 2.63
SSBP3-204ENST00000371320 BAG6P46379 1132 aa31.47■■■□□ 2.63
SSBP3-204ENST00000371320 SF3B2Q13435 895 aaKnown RBP31.47■■■□□ 2.63
SSBP3-204ENST00000371320 PGM5Q15124 567 aa31.47■■■□□ 2.63
SSBP3-204ENST00000371320 USP38Q8NB14 1042 aa31.47■■■□□ 2.63
SSBP3-204ENST00000371320 PBKQ96KB5 322 aa31.47■■■□□ 2.63
SSBP3-204ENST00000371320 PKNOX2Q96KN3 472 aa31.47■■■□□ 2.63
SSBP3-204ENST00000371320 TAOK3Q9H2K8 898 aa31.47■■■□□ 2.63
SSBP3-204ENST00000371320 PCIF1Q9H4Z3 704 aa31.47■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms