RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 ZNF568Q3ZCX4 644 aa23.7■■□□□ 1.38
TM9SF3-201ENST00000371142 UGGT1Q9NYU2 1555 aa23.69■■□□□ 1.38
TM9SF3-201ENST00000371142 PFDN1O60925 122 aa23.69■■□□□ 1.38
TM9SF3-201ENST00000371142 ARL4CP56559 192 aa23.69■■□□□ 1.38
TM9SF3-201ENST00000371142 SLC44A5Q8NCS7 719 aa23.69■■□□□ 1.38
TM9SF3-201ENST00000371142 NEO1Q92859 1461 aa23.69■■□□□ 1.38
TM9SF3-201ENST00000371142 RPAP1Q9BWH6 1393 aaPredicted RBP23.69■■□□□ 1.38
TM9SF3-201ENST00000371142 FBXO38Q6PIJ6 1188 aa23.69■■□□□ 1.38
TM9SF3-201ENST00000371142 PDCD6IPQ8WUM4 868 aaKnown RBP23.69■■□□□ 1.38
TM9SF3-201ENST00000371142 SLC13A4Q9UKG4 626 aa23.69■■□□□ 1.38
TM9SF3-201ENST00000371142 PODXLO00592 558 aa23.69■■□□□ 1.38
TM9SF3-201ENST00000371142 SCN4BQ8IWT1 228 aa23.69■■□□□ 1.38
TM9SF3-201ENST00000371142 SRRM1Q8IYB3 904 aaKnown RBP23.69■■□□□ 1.38
TM9SF3-201ENST00000371142 PITPNM3Q9BZ71 974 aa23.69■■□□□ 1.38
TM9SF3-201ENST00000371142 PNMA3Q9UL41 463 aa23.69■■□□□ 1.38
TM9SF3-201ENST00000371142 KITP10721 976 aa23.69■■□□□ 1.38
TM9SF3-201ENST00000371142 MAPK6Q16659 721 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 TBC1D1Q86TI0 1168 aaPredicted RBP23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 VPS39Q96JC1 886 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 FSD1LQ9BXM9 530 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 SCOCQ9UIL1 159 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 MOSPD1Q9UJG1 213 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 DIS3Q9Y2L1 958 aaKnown RBP23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 POTEB3A0JP26 581 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 POTECB2RU33 542 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 GUCY2CP25092 1073 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 GPC3P51654 580 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 POTEBQ6S5H4 581 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 GSPT2Q8IYD1 628 aaKnown RBP23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 ZNF668Q96K58 619 aaPredicted RBP23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 TTC7AQ9ULT0 858 aaPredicted RBP23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 LGALS16A8MUM7 142 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 KRT37O76014 449 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 MMEP08473 750 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 GPC5P78333 572 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 SNRNP48Q6IEG0 339 aaKnown RBP23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 XXYLT1Q8NBI6 393 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 MORC4Q8TE76 937 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 TTC25Q96NG3 672 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 ACTR5Q9H9F9 607 aaPredicted RBP23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 CREB3O43889 395 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 PPARGP37231 505 aaPredicted RBP23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 GRAMD1BQ3KR37 738 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 RBM41Q96IZ5 413 aaKnown RBP23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 MYCBPQ99417 103 aaPredicted RBP23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 ZHX2Q9Y6X8 837 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 CEP170Q5SW79 1584 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 A0A087WUV0 522 aaPredicted RBP23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 TMEM259Q4ZIN3 620 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 C11orf70Q9BRQ4 267 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 UBE4BO95155 1302 aa23.68■■□□□ 1.38
TM9SF3-201ENST00000371142 DRP2Q13474 957 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 SYNGAP1Q96PV0 1343 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 ASNSD1Q9NWL6 643 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 CCDC188H7C350 402 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 SPARCL1Q14515 664 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 SYT2Q8N9I0 419 aaPredicted RBP23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 TMEM35BQ8NCS4 154 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 PPARGC1AQ9UBK2 798 aaKnown RBP23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 FEM1BQ9UK73 627 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 ZRANB2O95218 330 aaKnown RBP eCLIP23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 NCLNQ969V3 563 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 EXOC4Q96A65 974 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 ZNF335Q9H4Z2 1342 aaPredicted RBP23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 DMTNQ08495 405 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 KCNH2Q12809 1159 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 EMBQ6PCB8 327 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 SZRD1Q7Z422 152 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 SYNE4Q8N205 404 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 CCDC195A0A1B0GUA6 201 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 RASA4BC9J798 803 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 RASA4O43374 803 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 ZNF211Q13398 564 aaPredicted RBP23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 TTC30AQ86WT1 665 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 SEPT12Q8IYM1 358 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 RNF25Q96BH1 459 aaPredicted RBP23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 IFT43Q96FT9 208 aa23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 UPF3AQ9H1J1 476 aaKnown RBP23.67■■□□□ 1.38
TM9SF3-201ENST00000371142 PRR36Q9H6K5 1346 aa23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 CFAP74Q9C0B2 1584 aa23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 STAT3P40763 770 aa23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 TWF2Q6IBS0 349 aaKnown RBP23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 MINPP1Q9UNW1 487 aa23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 TNFAIP2Q03169 654 aa23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 FAM47EQ6ZV65 393 aa23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 GIPC2Q8TF65 315 aa23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 CEP95Q96GE4 821 aa23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 DENND3A2RUS2 1198 aa23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 PAPOLAP51003 745 aaKnown RBP23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 RHPN2Q8IUC4 686 aa23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 MCPH1Q8NEM0 835 aa23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 NUP85Q9BW27 656 aa23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 GTSE1Q9NYZ3 720 aa23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 NCK2O43639 380 aa23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 ECE2O60344 883 aa23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 RPAINQ86UA6 219 aa23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 ENAHQ8N8S7 591 aaPredicted RBP23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 WRNIP1Q96S55 665 aa23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 EDEM3Q9BZQ6 932 aa23.66■■□□□ 1.38
TM9SF3-201ENST00000371142 VPS11Q9H270 941 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms