RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 TDHQ8IZJ6 230 aa15.29■□□□□ 0.04
SSR4-202ENST00000370085 LINC01465Q8N7H1 131 aa15.29■□□□□ 0.04
SSR4-202ENST00000370085 KIFAP3Q92845 792 aa15.29■□□□□ 0.04
SSR4-202ENST00000370085 EPSTI1Q96J88 318 aa15.29■□□□□ 0.04
SSR4-202ENST00000370085 IPO9Q96P70 1041 aaKnown RBP15.29■□□□□ 0.04
SSR4-202ENST00000370085 IFIH1Q9BYX4 1025 aaKnown RBP15.29■□□□□ 0.04
SSR4-202ENST00000370085 BMP2KQ9NSY1 1161 aaPredicted RBP15.29■□□□□ 0.04
SSR4-202ENST00000370085 STK17AQ9UEE5 414 aa15.29■□□□□ 0.04
SSR4-202ENST00000370085 KCNG1Q9UIX4 513 aa15.29■□□□□ 0.04
SSR4-202ENST00000370085 COL4A3BPQ9Y5P4 624 aa15.29■□□□□ 0.04
SSR4-202ENST00000370085 SCN5AQ14524 2016 aa15.29■□□□□ 0.04
SSR4-202ENST00000370085 GOLGA6L4A6NEF3 574 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 E9PMD0 336 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 GPR182O15218 404 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 NBNO60934 754 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 RPS6KA5O75582 802 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 PLA2G4BP0C869 781 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 ACRP10323 421 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 GHRP10912 638 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 CYP11B2P19099 503 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 PLCG1P19174 1290 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 KCNJ6P48051 423 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 GPC3P51654 580 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 PAK2Q13177 524 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 PPP2R5AQ15172 486 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 SPECC1Q5M775 1068 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 FBXO47Q5MNV8 452 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 FAM102BQ5T8I3 360 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 TRAF7Q6Q0C0 670 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 ZNF365Q70YC5 407 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 LEO1Q8WVC0 666 aaPredicted RBP15.28■□□□□ 0.04
SSR4-202ENST00000370085 PRPF31Q8WWY3 499 aaKnown RBP15.28■□□□□ 0.04
SSR4-202ENST00000370085 TMEM143Q96AN5 459 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 IFT74Q96LB3 600 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 RNPC3Q96LT9 517 aaKnown RBP15.28■□□□□ 0.04
SSR4-202ENST00000370085 DRC1Q96MC2 740 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 NLRP4Q96MN2 994 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 PLIN2Q99541 437 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 FTHL17Q9BXU8 183 aa15.28■□□□□ 0.04
SSR4-202ENST00000370085 A0A087WWV3 80 aa15.27■□□□□ 0.04
SSR4-202ENST00000370085 ABHD14A-ACY1A0A1B0GW23 586 aa15.27■□□□□ 0.04
SSR4-202ENST00000370085 ZBBXA8MT70 800 aa15.27■□□□□ 0.04
SSR4-202ENST00000370085 GPR32O75388 356 aa15.27■□□□□ 0.04
SSR4-202ENST00000370085 SFPQP23246 707 aaKnown RBP eCLIP15.27■□□□□ 0.04
SSR4-202ENST00000370085 EIF4BP23588 611 aaKnown RBP15.27■□□□□ 0.04
SSR4-202ENST00000370085 STAT6P42226 847 aa15.27■□□□□ 0.04
SSR4-202ENST00000370085 PHKA2P46019 1235 aa15.27■□□□□ 0.04
SSR4-202ENST00000370085 NCBP1Q09161 790 aaKnown RBP15.27■□□□□ 0.04
SSR4-202ENST00000370085 LAMTOR4Q0VGL1 99 aa15.27■□□□□ 0.04
SSR4-202ENST00000370085 PLEKHG4Q58EX7 1191 aa15.27■□□□□ 0.04
SSR4-202ENST00000370085 TMEM240Q5SV17 173 aa15.27■□□□□ 0.04
SSR4-202ENST00000370085 OTOP2Q7RTS6 562 aa15.27■□□□□ 0.04
SSR4-202ENST00000370085 SYT2Q8N9I0 419 aaPredicted RBP15.27■□□□□ 0.04
SSR4-202ENST00000370085 LARP4BQ92615 738 aaKnown RBP15.27■□□□□ 0.04
SSR4-202ENST00000370085 PNMA5Q96PV4 448 aa15.27■□□□□ 0.04
SSR4-202ENST00000370085 PPP1R16BQ96T49 567 aa15.27■□□□□ 0.04
SSR4-202ENST00000370085 OSMRQ99650 979 aa15.27■□□□□ 0.04
SSR4-202ENST00000370085 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.27■□□□□ 0.042e-8■□□□□ 8.3
SSR4-202ENST00000370085 LRRC27Q9C0I9 530 aa15.27■□□□□ 0.04
SSR4-202ENST00000370085 RNF216Q9NWF9 866 aaPredicted RBP15.27■□□□□ 0.04
SSR4-202ENST00000370085 PCDHA7Q9UN72 937 aa15.27■□□□□ 0.04
SSR4-202ENST00000370085 KRT18P05783 430 aaKnown RBP15.26■□□□□ 0.03
SSR4-202ENST00000370085 POU5F1BQ06416 359 aa15.26■□□□□ 0.03
SSR4-202ENST00000370085 MKRN4PQ13434 485 aaPredicted RBP15.26■□□□□ 0.03
SSR4-202ENST00000370085 LPIN1Q14693 890 aa15.26■□□□□ 0.03
SSR4-202ENST00000370085 MBTPS1Q14703 1052 aa15.26■□□□□ 0.03
SSR4-202ENST00000370085 PCBP1Q15365 356 aaKnown RBP eCLIP15.26■□□□□ 0.032e-6■■■□□ 17.3
SSR4-202ENST00000370085 ADALQ6DHV7 355 aa15.26■□□□□ 0.03
SSR4-202ENST00000370085 SV2BQ7L1I2 683 aa15.26■□□□□ 0.03
SSR4-202ENST00000370085 MAEAQ7L5Y9 396 aa15.26■□□□□ 0.03
SSR4-202ENST00000370085 IQUBQ8NA54 791 aa15.26■□□□□ 0.03
SSR4-202ENST00000370085 DBF4BQ8NFT6 615 aa15.26■□□□□ 0.03
SSR4-202ENST00000370085 HERVK_113Q902F9 699 aa15.26■□□□□ 0.03
SSR4-202ENST00000370085 RAD54LQ92698 747 aa15.26■□□□□ 0.03
SSR4-202ENST00000370085 POLR3FQ9H1D9 316 aaPredicted RBP15.26■□□□□ 0.03
SSR4-202ENST00000370085 ADAMTS10Q9H324 1103 aa15.26■□□□□ 0.03
SSR4-202ENST00000370085 CUEDC2Q9H467 287 aa15.26■□□□□ 0.03
SSR4-202ENST00000370085 XPNPEP1Q9NQW7 623 aa15.26■□□□□ 0.03
SSR4-202ENST00000370085 SLC4A7Q9Y6M7 1214 aa15.26■□□□□ 0.03
SSR4-202ENST00000370085 TET1Q8NFU7 2136 aa15.25■□□□□ 0.03
SSR4-202ENST00000370085 A0A087WZ62 844 aa15.25■□□□□ 0.03
SSR4-202ENST00000370085 SRGAP2CP0DJJ0 459 aa15.25■□□□□ 0.03
SSR4-202ENST00000370085 DARSP14868 501 aaKnown RBP15.25■□□□□ 0.03
SSR4-202ENST00000370085 GUCY2CP25092 1073 aa15.25■□□□□ 0.03
SSR4-202ENST00000370085 CD52P31358 61 aa15.25■□□□□ 0.03
SSR4-202ENST00000370085 ARL2P36404 184 aa15.25■□□□□ 0.03
SSR4-202ENST00000370085 AMPD3Q01432 767 aa15.25■□□□□ 0.03
SSR4-202ENST00000370085 NFX1Q12986 1120 aaKnown RBP15.25■□□□□ 0.03
SSR4-202ENST00000370085 DRP2Q13474 957 aa15.25■□□□□ 0.03
SSR4-202ENST00000370085 SHHQ15465 462 aa15.25■□□□□ 0.03
SSR4-202ENST00000370085 AXDND1Q5T1B0 1012 aaPredicted RBP15.25■□□□□ 0.03
SSR4-202ENST00000370085 RINT1Q6NUQ1 792 aa15.25■□□□□ 0.03
SSR4-202ENST00000370085 USP49Q70CQ1 688 aa15.25■□□□□ 0.03
SSR4-202ENST00000370085 SRGAP1Q7Z6B7 1085 aa15.25■□□□□ 0.03
SSR4-202ENST00000370085 GPBP1Q86WP2 473 aa15.25■□□□□ 0.03
SSR4-202ENST00000370085 ZBTB8OSQ8IWT0 167 aa15.25■□□□□ 0.03
SSR4-202ENST00000370085 RNF149Q8NC42 400 aa15.25■□□□□ 0.03
SSR4-202ENST00000370085 CCDC34Q96HJ3 373 aa15.25■□□□□ 0.03
SSR4-202ENST00000370085 FDXACB1Q9BRP7 624 aaPredicted RBP15.25■□□□□ 0.03
SSR4-202ENST00000370085 C2orf40Q9H1Z8 148 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms