RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 KIFAP3Q92845 792 aa17.24■□□□□ 0.35
PRPF38B-202ENST00000370022 TMEM143Q96AN5 459 aa17.24■□□□□ 0.35
PRPF38B-202ENST00000370022 CELF4Q9BZC1 486 aaKnown RBP17.24■□□□□ 0.35
PRPF38B-202ENST00000370022 TNMDQ9H2S6 317 aa17.24■□□□□ 0.35
PRPF38B-202ENST00000370022 BMP2KQ9NSY1 1161 aaPredicted RBP17.24■□□□□ 0.35
PRPF38B-202ENST00000370022 TRPV2Q9Y5S1 764 aa17.24■□□□□ 0.35
PRPF38B-202ENST00000370022 SQORQ9Y6N5 450 aa17.24■□□□□ 0.35
PRPF38B-202ENST00000370022 TRIP12Q14669 1992 aaPredicted RBP17.24■□□□□ 0.35
PRPF38B-202ENST00000370022 CYP2C18P33260 490 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 ARL2P36404 184 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 NDUFA8P51970 172 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 AMPD3Q01432 767 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 FAM102BQ5T8I3 360 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 TRAF7Q6Q0C0 670 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 ZNF410Q86VK4 478 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 GPBP1Q86WP2 473 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 RHPN2Q8IUC4 686 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 CEP57L1Q8IYX8 460 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 PRPF31Q8WWY3 499 aaKnown RBP17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 DRC1Q96MC2 740 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 RUSC1Q9BVN2 902 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 WNT8AQ9H1J5 351 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 C17orf75Q9HAS0 396 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 ODF2LQ9ULJ1 636 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 ZMYND8Q9ULU4 1186 aaPredicted RBP17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 COL4A3BPQ9Y5P4 624 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 CDY2AQ9Y6F7 541 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 UMODL1Q5DID0 1318 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 PDE4DIPQ5VU43 2346 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 GOLGA6L22H0YM25 854 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 GPR32O75388 356 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 CHRNA1P02708 482 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 VTNP04004 478 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 CTSHP09668 335 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 SLFN14P0C7P3 912 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 SYN1P17600 705 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 ITGB8P26012 769 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 GPC3P51654 580 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 CRYBB1P53674 252 aaPredicted RBP17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 UBE2HP62256 183 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 POU5F1BQ06416 359 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 TFDP1Q14186 410 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 DHX8Q14562 1220 aaKnown RBP17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 FAM43BQ6ZT52 329 aaPredicted RBP17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 USP38Q8NB14 1042 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 CCDC34Q96HJ3 373 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 LBHD1Q9BQE6 289 aaPredicted RBP17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 POLR3FQ9H1D9 316 aaPredicted RBP17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 KBTBD4Q9NVX7 518 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 KCNG1Q9UIX4 513 aa17.23■□□□□ 0.35
PRPF38B-202ENST00000370022 DNAH12Q6ZR08 3092 aa17.22■□□□□ 0.35
PRPF38B-202ENST00000370022 KRT18P05783 430 aaKnown RBP17.22■□□□□ 0.35
PRPF38B-202ENST00000370022 PFKMP08237 780 aa17.22■□□□□ 0.35
PRPF38B-202ENST00000370022 CCL23P55773 120 aa17.22■□□□□ 0.35
PRPF38B-202ENST00000370022 NLRP11P59045 1033 aaKnown RBP17.22■□□□□ 0.35
PRPF38B-202ENST00000370022 TMEM62Q0P6H9 643 aa17.22■□□□□ 0.35
PRPF38B-202ENST00000370022 LAMTOR4Q0VGL1 99 aa17.22■□□□□ 0.35
PRPF38B-202ENST00000370022 PPP2R5AQ15172 486 aa17.22■□□□□ 0.35
PRPF38B-202ENST00000370022 ARSHQ5FYA8 562 aa17.22■□□□□ 0.35
PRPF38B-202ENST00000370022 MAEAQ7L5Y9 396 aa17.22■□□□□ 0.35
PRPF38B-202ENST00000370022 NLRP7Q8WX94 980 aa17.22■□□□□ 0.35
PRPF38B-202ENST00000370022 GOLPH3LQ9H4A5 285 aa17.22■□□□□ 0.35
PRPF38B-202ENST00000370022 HIP1RO75146 1068 aa17.21■□□□□ 0.35
PRPF38B-202ENST00000370022 PRPF40AO75400 957 aaKnown RBP17.21■□□□□ 0.35
PRPF38B-202ENST00000370022 FPGSQ05932 587 aa17.21■□□□□ 0.35
PRPF38B-202ENST00000370022 FAM160A1Q05DH4 1040 aa17.21■□□□□ 0.35
PRPF38B-202ENST00000370022 PPIGQ13427 754 aaKnown RBP eCLIP17.21■□□□□ 0.351e-14■□□□□ 9.7
PRPF38B-202ENST00000370022 KIZQ2M2Z5 673 aa17.21■□□□□ 0.35
PRPF38B-202ENST00000370022 RPUSD2Q8IZ73 545 aaKnown RBP17.21■□□□□ 0.35
PRPF38B-202ENST00000370022 BADQ92934 168 aa17.21■□□□□ 0.35
PRPF38B-202ENST00000370022 SCLYQ96I15 445 aa17.21■□□□□ 0.35
PRPF38B-202ENST00000370022 IFT74Q96LB3 600 aa17.21■□□□□ 0.35
PRPF38B-202ENST00000370022 SCLT1Q96NL6 688 aa17.21■□□□□ 0.35
PRPF38B-202ENST00000370022 INO80BQ9C086 356 aaPredicted RBP17.21■□□□□ 0.35
PRPF38B-202ENST00000370022 ADAMTS10Q9H324 1103 aa17.21■□□□□ 0.35
PRPF38B-202ENST00000370022 GPRC5CQ9NQ84 441 aa17.21■□□□□ 0.35
PRPF38B-202ENST00000370022 ACTN4O43707 911 aaKnown RBP17.2■□□□□ 0.34
PRPF38B-202ENST00000370022 ZNF202O95125 648 aa17.2■□□□□ 0.34
PRPF38B-202ENST00000370022 MYL1P05976 194 aa17.2■□□□□ 0.34
PRPF38B-202ENST00000370022 GLRA2P23416 452 aa17.2■□□□□ 0.34
PRPF38B-202ENST00000370022 NAMPTP43490 491 aa17.2■□□□□ 0.34
PRPF38B-202ENST00000370022 LONRF3Q496Y0 759 aa17.2■□□□□ 0.34
PRPF38B-202ENST00000370022 TPRNQ4KMQ1 711 aa17.2■□□□□ 0.34
PRPF38B-202ENST00000370022 FBXO47Q5MNV8 452 aa17.2■□□□□ 0.34
PRPF38B-202ENST00000370022 ODR4Q5SWX8 454 aa17.2■□□□□ 0.34
PRPF38B-202ENST00000370022 FMR1NBQ8N0W7 255 aaPredicted RBP17.2■□□□□ 0.34
PRPF38B-202ENST00000370022 DDX12PQ92771 950 aa17.2■□□□□ 0.34
PRPF38B-202ENST00000370022 NLRP4Q96MN2 994 aa17.2■□□□□ 0.34
PRPF38B-202ENST00000370022 REEP2Q9BRK0 252 aa17.2■□□□□ 0.34
PRPF38B-202ENST00000370022 NFKBIZQ9BYH8 718 aa17.2■□□□□ 0.34
PRPF38B-202ENST00000370022 GCOM2Q9BZD3 368 aaPredicted RBP17.2■□□□□ 0.34
PRPF38B-202ENST00000370022 TANC1Q9C0D5 1861 aa17.2■□□□□ 0.34
PRPF38B-202ENST00000370022 LARSQ9P2J5 1176 aaKnown RBP17.2■□□□□ 0.34
PRPF38B-202ENST00000370022 SERTAD1Q9UHV2 236 aa17.2■□□□□ 0.34
PRPF38B-202ENST00000370022 GINS2Q9Y248 185 aa17.2■□□□□ 0.34
PRPF38B-202ENST00000370022 GADD45BO75293 160 aaPredicted RBP17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 TBCAO75347 108 aaKnown RBP17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 CXCL10P02778 98 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 CSF2RAP15509 400 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 EIF4BP23588 611 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms