RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 TAS2R14Q9NYV8 317 aa12.54□□□□□ -0.4
RAB39B-201ENST00000369454 GREB1LQ9C091 1923 aaPredicted RBP12.53□□□□□ -0.4
RAB39B-201ENST00000369454 ATRNL1Q5VV63 1379 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 TRIM66O15016 1216 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 HSF2BPO75031 334 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 KIF4AO95239 1232 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 GAP43P17677 238 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 GCLMP48507 274 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 AARSP49588 968 aaKnown RBP eCLIP12.53□□□□□ -0.4
RAB39B-201ENST00000369454 MCTP2Q6DN12 878 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 FOXR2Q6PJQ5 311 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 ZC3H3Q8IXZ2 948 aaKnown RBP12.53□□□□□ -0.4
RAB39B-201ENST00000369454 SLC5A5Q92911 643 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 FAM84AQ96KN4 292 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 ZIM3Q96PE6 472 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 PLCB1Q9NQ66 1216 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 TSKSQ9UJT2 592 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 LRRC31Q6UY01 552 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 NSMFQ6X4W1 530 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 METTL13Q8N6R0 699 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 LNX1Q8TBB1 728 aaPredicted RBP12.53□□□□□ -0.4
RAB39B-201ENST00000369454 INPP4AQ96PE3 977 aaPredicted RBP12.53□□□□□ -0.4
RAB39B-201ENST00000369454 CBWD1Q9BRT8 395 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 KIFC3Q9BVG8 833 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 TUFT1Q9NNX1 390 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 VIL1P09327 827 aaKnown RBP12.53□□□□□ -0.4
RAB39B-201ENST00000369454 FKBP1AP62942 108 aaKnown RBP12.53□□□□□ -0.4
RAB39B-201ENST00000369454 ZNF211Q13398 564 aaPredicted RBP12.53□□□□□ -0.4
RAB39B-201ENST00000369454 TAF3Q5VWG9 929 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 USP38Q8NB14 1042 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 AMACRQ9UHK6 382 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 TCEAL9Q9UHQ7 104 aa12.53□□□□□ -0.4
RAB39B-201ENST00000369454 CNTNAP1P78357 1384 aa12.52□□□□□ -0.4
RAB39B-201ENST00000369454 QSER1Q2KHR3 1735 aa12.52□□□□□ -0.4
RAB39B-201ENST00000369454 EGFRP00533 1210 aa12.52□□□□□ -0.4
RAB39B-201ENST00000369454 CAP2P40123 477 aa12.52□□□□□ -0.4
RAB39B-201ENST00000369454 MYL7Q01449 175 aa12.52□□□□□ -0.4
RAB39B-201ENST00000369454 PPP2R5CQ13362 524 aa12.52□□□□□ -0.4
RAB39B-201ENST00000369454 MAATS1Q7Z4T9 603 aa12.52□□□□□ -0.4
RAB39B-201ENST00000369454 DAW1Q8N136 415 aa12.52□□□□□ -0.4
RAB39B-201ENST00000369454 TTLL6Q8N841 843 aa12.52□□□□□ -0.4
RAB39B-201ENST00000369454 TPCN2Q8NHX9 752 aa12.52□□□□□ -0.4
RAB39B-201ENST00000369454 FIZ1Q96SL8 496 aa12.52□□□□□ -0.4
RAB39B-201ENST00000369454 CELF4Q9BZC1 486 aaKnown RBP12.52□□□□□ -0.4
RAB39B-201ENST00000369454 RANBP17Q9H2T7 1088 aaKnown RBP12.52□□□□□ -0.4
RAB39B-201ENST00000369454 PSD3Q9NYI0 1048 aa12.52□□□□□ -0.4
RAB39B-201ENST00000369454 IGSF9BQ9UPX0 1349 aa12.52□□□□□ -0.41
RAB39B-201ENST00000369454 F8VZ95 297 aa12.52□□□□□ -0.41
RAB39B-201ENST00000369454 KRIT1O00522 736 aa12.52□□□□□ -0.41
RAB39B-201ENST00000369454 NPEPPSP55786 919 aa12.52□□□□□ -0.41
RAB39B-201ENST00000369454 SOX10P56693 466 aa12.52□□□□□ -0.41
RAB39B-201ENST00000369454 SLC15A2Q16348 729 aa12.52□□□□□ -0.41
RAB39B-201ENST00000369454 CFAP58Q5T655 872 aa12.52□□□□□ -0.41
RAB39B-201ENST00000369454 PRAMEF18Q5VWM3 479 aa12.52□□□□□ -0.41
RAB39B-201ENST00000369454 PLA2G4FQ68DD2 849 aa12.52□□□□□ -0.41
RAB39B-201ENST00000369454 OR2W6PQ8NHA6 318 aa12.52□□□□□ -0.41
RAB39B-201ENST00000369454 CCDC127Q96BQ5 260 aa12.52□□□□□ -0.41
RAB39B-201ENST00000369454 INTS2Q9H0H0 1204 aaKnown RBP12.52□□□□□ -0.41
RAB39B-201ENST00000369454 UBE2TQ9NPD8 197 aaPredicted RBP12.52□□□□□ -0.41
RAB39B-201ENST00000369454 TESPA1A2RU30 521 aaPredicted RBP12.51□□□□□ -0.41
RAB39B-201ENST00000369454 FOXN3O00409 490 aaPredicted RBP12.51□□□□□ -0.41
RAB39B-201ENST00000369454 NPM3O75607 178 aaKnown RBP12.51□□□□□ -0.41
RAB39B-201ENST00000369454 BMT2Q1RMZ1 405 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 MUM1L1Q5H9M0 696 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 KAT5Q92993 513 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 DPH5Q9H2P9 285 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 CWC15Q9P013 229 aaKnown RBP12.51□□□□□ -0.41
RAB39B-201ENST00000369454 NOC2LQ9Y3T9 749 aaKnown RBP12.51□□□□□ -0.41
RAB39B-201ENST00000369454 CTDP1Q9Y5B0 961 aaPredicted RBP12.51□□□□□ -0.41
RAB39B-201ENST00000369454 BZW2Q9Y6E2 419 aaKnown RBP12.51□□□□□ -0.41
RAB39B-201ENST00000369454 ZHX2Q9Y6X8 837 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 EMSYQ7Z589 1322 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 SLC16A4O15374 487 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 SLC16A3O15427 465 aaKnown RBP12.51□□□□□ -0.41
RAB39B-201ENST00000369454 ZEB2O60315 1214 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 HOXA7P31268 230 aaPredicted RBP12.51□□□□□ -0.41
RAB39B-201ENST00000369454 SOX5P35711 763 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 MKRN4PQ13434 485 aaPredicted RBP12.51□□□□□ -0.41
RAB39B-201ENST00000369454 PHLDB3Q6NSJ2 640 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 SUPT20HQ8NEM7 779 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 SLC35G2Q8TBE7 412 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 SLC20A1Q8WUM9 679 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 MXRA8Q9BRK3 442 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 EHMT1Q9H9B1 1298 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 C10orf71Q711Q0 1435 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 BUB1BO60566 1050 aaPredicted RBP12.51□□□□□ -0.41
RAB39B-201ENST00000369454 CLSTN1O94985 981 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 DPEP1P16444 411 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 TNFAIP3P21580 790 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 PEX3P56589 373 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 TNNC1P63316 161 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 SPDYE2Q495Y8 402 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 TTMPQ5BVD1 217 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 AADACL2Q6P093 401 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 ARHGEF26Q96DR7 871 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 BORCS6Q96GS4 357 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 FRMPD4Q14CM0 1322 aa12.51□□□□□ -0.41
RAB39B-201ENST00000369454 CCDC169A6NNP5 214 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 SART1O43290 800 aaKnown RBP12.5□□□□□ -0.41
RAB39B-201ENST00000369454 FERP16591 822 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms