RNA–Protein interactions for RNA: ENST00000369278.4

UFL1-201, Transcript of UFM1 specific ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFL1, Length 4,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFL1-201ENST00000369278 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.28□□□□□ -1.08
UFL1-201ENST00000369278 TRIM56Q9BRZ2 755 aaKnown RBP8.28□□□□□ -1.08
UFL1-201ENST00000369278 CDC42BPGQ6DT37 1551 aa8.28□□□□□ -1.08
UFL1-201ENST00000369278 GRIN2DO15399 1336 aa8.28□□□□□ -1.08
UFL1-201ENST00000369278 ZCCHC11Q5TAX3 1644 aaKnown RBP8.28□□□□□ -1.08
UFL1-201ENST00000369278 DNAJC8O75937 253 aaPredicted RBP8.28□□□□□ -1.08
UFL1-201ENST00000369278 STARD3NLO95772 234 aa8.28□□□□□ -1.08
UFL1-201ENST00000369278 ZNF18P17022 549 aa8.28□□□□□ -1.08
UFL1-201ENST00000369278 ARHGAP4P98171 946 aa8.28□□□□□ -1.08
UFL1-201ENST00000369278 FKBP3Q00688 224 aaKnown RBP8.28□□□□□ -1.08
UFL1-201ENST00000369278 FAM69CQ0P6D2 419 aa8.28□□□□□ -1.08
UFL1-201ENST00000369278 C2CD6Q53TS8 623 aa8.28□□□□□ -1.08
UFL1-201ENST00000369278 IZUMO2Q6UXV1 221 aa8.28□□□□□ -1.08
UFL1-201ENST00000369278 TPH2Q8IWU9 490 aa8.28□□□□□ -1.08
UFL1-201ENST00000369278 METTL13Q8N6R0 699 aa8.28□□□□□ -1.08
UFL1-201ENST00000369278 PDZD8Q8NEN9 1154 aa8.28□□□□□ -1.08
UFL1-201ENST00000369278 LARP4BQ92615 738 aaKnown RBP8.28□□□□□ -1.08
UFL1-201ENST00000369278 COA7Q96BR5 231 aa8.28□□□□□ -1.08
UFL1-201ENST00000369278 ZNF653Q96CK0 615 aa8.28□□□□□ -1.08
UFL1-201ENST00000369278 GREM2Q9H772 168 aa8.28□□□□□ -1.08
UFL1-201ENST00000369278 METTL14Q9HCE5 456 aaKnown RBP8.28□□□□□ -1.08
UFL1-201ENST00000369278 HDAC9Q9UKV0 1011 aa8.28□□□□□ -1.08
UFL1-201ENST00000369278 ARHGAP26Q9UNA1 814 aa8.28□□□□□ -1.08
UFL1-201ENST00000369278 COL4A3BPQ9Y5P4 624 aa8.28□□□□□ -1.08
UFL1-201ENST00000369278 IVNS1ABPQ9Y6Y0 642 aa8.28□□□□□ -1.08
UFL1-201ENST00000369278 ZFYVE9O95405 1425 aa8.28□□□□□ -1.08
UFL1-201ENST00000369278 B2RBV5 119 aa8.27□□□□□ -1.08
UFL1-201ENST00000369278 GNA11P29992 359 aa8.27□□□□□ -1.08
UFL1-201ENST00000369278 TOB1P50616 345 aaPredicted RBP8.27□□□□□ -1.08
UFL1-201ENST00000369278 MRPL12P52815 198 aaKnown RBP8.27□□□□□ -1.08
UFL1-201ENST00000369278 UBXN2AP68543 259 aa8.27□□□□□ -1.08
UFL1-201ENST00000369278 SF3B3Q15393 1217 aaKnown RBP8.27□□□□□ -1.08
UFL1-201ENST00000369278 PAPD7Q5XG87 772 aaKnown RBP8.27□□□□□ -1.08
UFL1-201ENST00000369278 ANO5Q75V66 913 aa8.27□□□□□ -1.08
UFL1-201ENST00000369278 PTF1AQ7RTS3 328 aa8.27□□□□□ -1.08
UFL1-201ENST00000369278 REXO1Q8N1G1 1221 aaKnown RBP8.27□□□□□ -1.08
UFL1-201ENST00000369278 EFCAB3Q8N7B9 438 aa8.27□□□□□ -1.08
UFL1-201ENST00000369278 USP38Q8NB14 1042 aa8.27□□□□□ -1.08
UFL1-201ENST00000369278 PNMA1Q8ND90 353 aa8.27□□□□□ -1.08
UFL1-201ENST00000369278 DHTKD1Q96HY7 919 aaPredicted RBP8.27□□□□□ -1.08
UFL1-201ENST00000369278 ARMCX1Q9P291 453 aa8.27□□□□□ -1.08
UFL1-201ENST00000369278 APPL1Q9UKG1 709 aa8.27□□□□□ -1.08
UFL1-201ENST00000369278 TDRKHQ9Y2W6 561 aaKnown RBP8.27□□□□□ -1.08
UFL1-201ENST00000369278 REXO2Q9Y3B8 237 aaKnown RBP8.27□□□□□ -1.08
UFL1-201ENST00000369278 ANKRD26Q9UPS8 1709 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 SGK1O00141 431 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 TRAPPC3O43617 180 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 PEX1O43933 1283 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 RPL13P26373 211 aaKnown RBP8.27□□□□□ -1.09
UFL1-201ENST00000369278 TMPRSS15P98073 1019 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 ATP1A4Q13733 1029 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 EARS2Q5JPH6 523 aaKnown RBP8.27□□□□□ -1.09
UFL1-201ENST00000369278 OLFML1Q6UWY5 402 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 SMC1BQ8NDV3 1235 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 FAM81AQ8TBF8 368 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 TLR10Q9BXR5 811 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 PHACTR1Q9C0D0 580 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 THAP9Q9H5L6 903 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 LY9Q9HBG7 655 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 ANGPTL2Q9UKU9 493 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 SCINQ9Y6U3 715 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 ARHGEF28Q8N1W1 1705 aaKnown RBP8.27□□□□□ -1.09
UFL1-201ENST00000369278 PI4K2BG5E9Z4 385 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 RTN2O75298 545 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 SLC9A1P19634 815 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 MCAMP43121 646 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 ARFIP2P53365 341 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 NOP14P78316 857 aaKnown RBP8.27□□□□□ -1.09
UFL1-201ENST00000369278 MED21Q13503 144 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 SPARCL1Q14515 664 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 PLCB4Q15147 1175 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 HSP90AA5PQ58FG0 334 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 AADACL2Q6P093 401 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 DCUN1D2Q6PH85 259 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 FAM228AQ86W67 206 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 LRRC47Q8N1G4 583 aaKnown RBP8.27□□□□□ -1.09
UFL1-201ENST00000369278 NME8Q8N427 588 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 CCDC89Q8N998 374 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 ATG4AQ8WYN0 398 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 RNF25Q96BH1 459 aaPredicted RBP8.27□□□□□ -1.09
UFL1-201ENST00000369278 ELMO3Q96BJ8 720 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 C18orf8Q96DM3 657 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 PBKQ96KB5 322 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 RUNDC3BQ96NL0 473 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 NDEL1Q9GZM8 345 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 PARP2Q9UGN5 583 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 ABCC3O15438 1527 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 CHD2O14647 1828 aaKnown RBP8.27□□□□□ -1.09
UFL1-201ENST00000369278 NELFEP18615 380 aaKnown RBP8.27□□□□□ -1.09
UFL1-201ENST00000369278 HSPA9P38646 679 aaKnown RBP8.27□□□□□ -1.09
UFL1-201ENST00000369278 GALK1P51570 392 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 IL1RL1Q01638 556 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 IL31Q6EBC2 164 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 MTDHQ86UE4 582 aaKnown RBP8.27□□□□□ -1.09
UFL1-201ENST00000369278 TBCKQ8TEA7 893 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 UCMAQ8WVF2 138 aa8.27□□□□□ -1.09
UFL1-201ENST00000369278 SCG3Q8WXD2 468 aaKnown RBP8.27□□□□□ -1.09
UFL1-201ENST00000369278 CRYBG1Q9Y4K1 1723 aa8.26□□□□□ -1.09
UFL1-201ENST00000369278 LSM1O15116 133 aaKnown RBP8.26□□□□□ -1.09
UFL1-201ENST00000369278 ORC4O43929 436 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms