RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 PDXKO00764 312 aa26.33■■□□□ 1.81
SNX3-203ENST00000368979 PPFIA4O75335 1185 aa26.33■■□□□ 1.81
SNX3-203ENST00000368979 FGFR1OPO95684 399 aaKnown RBP26.33■■□□□ 1.81
SNX3-203ENST00000368979 PEX3P56589 373 aa26.33■■□□□ 1.81
SNX3-203ENST00000368979 SOX10P56693 466 aa26.33■■□□□ 1.81
SNX3-203ENST00000368979 KCNA1Q09470 495 aa26.33■■□□□ 1.81
SNX3-203ENST00000368979 FAM114A1Q8IWE2 563 aa26.33■■□□□ 1.81
SNX3-203ENST00000368979 SLC7A3Q8WY07 619 aa26.33■■□□□ 1.81
SNX3-203ENST00000368979 BSNDQ8WZ55 320 aa26.33■■□□□ 1.81
SNX3-203ENST00000368979 TRIB2Q92519 343 aa26.33■■□□□ 1.81
SNX3-203ENST00000368979 TYW1Q9NV66 732 aaKnown RBP26.33■■□□□ 1.81
SNX3-203ENST00000368979 ZBTB42B2RXF5 422 aa26.32■■□□□ 1.8
SNX3-203ENST00000368979 FKBP3Q00688 224 aaKnown RBP26.32■■□□□ 1.8
SNX3-203ENST00000368979 ANKRD20A12PQ8NF67 263 aa26.32■■□□□ 1.8
SNX3-203ENST00000368979 SPIRE2Q8WWL2 714 aa26.32■■□□□ 1.8
SNX3-203ENST00000368979 C16orf70Q9BSU1 422 aa26.32■■□□□ 1.8
SNX3-203ENST00000368979 POLR3FQ9H1D9 316 aaPredicted RBP26.32■■□□□ 1.8
SNX3-203ENST00000368979 HBP1O60381 514 aa26.31■■□□□ 1.8
SNX3-203ENST00000368979 MAFO75444 373 aaPredicted RBP26.31■■□□□ 1.8
SNX3-203ENST00000368979 DMP1Q13316 513 aaPredicted RBP26.31■■□□□ 1.8
SNX3-203ENST00000368979 SPC24Q8NBT2 197 aa26.31■■□□□ 1.8
SNX3-203ENST00000368979 CNOT6LQ96LI5 555 aaKnown RBP26.31■■□□□ 1.8
SNX3-203ENST00000368979 CEP63Q96MT8 703 aa26.31■■□□□ 1.8
SNX3-203ENST00000368979 NTPCRQ9BSD7 190 aaKnown RBP26.31■■□□□ 1.8
SNX3-203ENST00000368979 MAGEC2Q9UBF1 373 aaPredicted RBP26.31■■□□□ 1.8
SNX3-203ENST00000368979 FAM184BQ9ULE4 1060 aa26.31■■□□□ 1.8
SNX3-203ENST00000368979 TGFB1I1O43294 461 aa26.3■■□□□ 1.8
SNX3-203ENST00000368979 CALUO43852 315 aaPredicted RBP26.3■■□□□ 1.8
SNX3-203ENST00000368979 TPM3P06753 285 aa26.3■■□□□ 1.8
SNX3-203ENST00000368979 NPTX2P47972 431 aa26.3■■□□□ 1.8
SNX3-203ENST00000368979 GTF2BQ00403 316 aa26.3■■□□□ 1.8
SNX3-203ENST00000368979 NR1I3Q14994 352 aa26.3■■□□□ 1.8
SNX3-203ENST00000368979 TLK2Q86UE8 772 aa26.3■■□□□ 1.8
SNX3-203ENST00000368979 EEF2KMTQ96G04 330 aa26.3■■□□□ 1.8
SNX3-203ENST00000368979 TRPC6Q9Y210 931 aa26.3■■□□□ 1.8
SNX3-203ENST00000368979 Q9Y3F1 56 aa26.3■■□□□ 1.8
SNX3-203ENST00000368979 A6NJR5 290 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 DYNC1LI2O43237 492 aaPredicted RBP26.29■■□□□ 1.8
SNX3-203ENST00000368979 ZNF286BP0CG31 522 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 CYBAP13498 195 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 ARL2P36404 184 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 COPB1P53618 953 aaKnown RBP26.29■■□□□ 1.8
SNX3-203ENST00000368979 DGKDQ16760 1214 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 MFSD14CQ5VZR4 134 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 HAUS6Q7Z4H7 955 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 KSR1Q8IVT5 923 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 DRC7Q8IY82 874 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 RNPEPQ9H4A4 650 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 TAB2Q9NYJ8 693 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 IGKV6-21A0A0C4DH24 114 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 SLC16A4O15374 487 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 SMTNP53814 917 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 TBC1D8BQ0IIM8 1120 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 NFIL3Q16649 462 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 EXOC8Q8IYI6 725 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 TMEM161BQ8NDZ6 487 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 TRPV1Q8NER1 839 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 TMEM143Q96AN5 459 aa26.29■■□□□ 1.8
SNX3-203ENST00000368979 LENG1Q96BZ8 264 aaPredicted RBP26.29■■□□□ 1.8
SNX3-203ENST00000368979 RTN4Q9NQC3 1192 aaKnown RBP26.29■■□□□ 1.8
SNX3-203ENST00000368979 ZNF215Q9UL58 517 aaPredicted RBP26.29■■□□□ 1.8
SNX3-203ENST00000368979 GAS2O43903 313 aaKnown RBP26.28■■□□□ 1.8
SNX3-203ENST00000368979 AKR1A1P14550 325 aa26.28■■□□□ 1.8
SNX3-203ENST00000368979 FILIP1LQ4L180 1135 aa26.28■■□□□ 1.8
SNX3-203ENST00000368979 FILIP1Q7Z7B0 1213 aa26.28■■□□□ 1.8
SNX3-203ENST00000368979 CD99L2Q8TCZ2 262 aa26.28■■□□□ 1.8
SNX3-203ENST00000368979 HVCN1Q96D96 273 aa26.28■■□□□ 1.8
SNX3-203ENST00000368979 IFT74Q96LB3 600 aa26.28■■□□□ 1.8
SNX3-203ENST00000368979 KMT5AQ9NQR1 393 aa26.28■■□□□ 1.8
SNX3-203ENST00000368979 CCDC169A6NNP5 214 aa26.27■■□□□ 1.8
SNX3-203ENST00000368979 GOLGA6L6A8MZA4 724 aa26.27■■□□□ 1.8
SNX3-203ENST00000368979 GPR25O00155 361 aa26.27■■□□□ 1.8
SNX3-203ENST00000368979 PTMAP06454 111 aaKnown RBP26.27■■□□□ 1.8
SNX3-203ENST00000368979 ZNF484Q5JVG2 852 aa26.27■■□□□ 1.8
SNX3-203ENST00000368979 VSTM4Q8IW00 320 aa26.27■■□□□ 1.8
SNX3-203ENST00000368979 ASAP3Q8TDY4 903 aa26.27■■□□□ 1.8
SNX3-203ENST00000368979 KCNN1Q92952 543 aa26.27■■□□□ 1.8
SNX3-203ENST00000368979 ACCSQ96QU6 501 aa26.27■■□□□ 1.8
SNX3-203ENST00000368979 TMEM206Q9H813 350 aa26.27■■□□□ 1.8
SNX3-203ENST00000368979 KCNG1Q9UIX4 513 aa26.27■■□□□ 1.8
SNX3-203ENST00000368979 COL1A2P08123 1366 aa26.27■■□□□ 1.8
SNX3-203ENST00000368979 H3BRB1 525 aa26.26■■□□□ 1.79
SNX3-203ENST00000368979 GLRA2P23416 452 aa26.26■■□□□ 1.79
SNX3-203ENST00000368979 NR2F2P24468 414 aa26.26■■□□□ 1.79
SNX3-203ENST00000368979 ADAM9Q13443 819 aa26.26■■□□□ 1.79
SNX3-203ENST00000368979 HS1BP3Q53T59 392 aa26.26■■□□□ 1.79
SNX3-203ENST00000368979 CREBRFQ8IUR6 639 aa26.26■■□□□ 1.79
SNX3-203ENST00000368979 DNAJC5GQ8N7S2 189 aa26.26■■□□□ 1.79
SNX3-203ENST00000368979 TRIM44Q96DX7 344 aaPredicted RBP26.26■■□□□ 1.79
SNX3-203ENST00000368979 JPH2Q9BR39 696 aaPredicted RBP26.26■■□□□ 1.79
SNX3-203ENST00000368979 KIFC3Q9BVG8 833 aa26.26■■□□□ 1.79
SNX3-203ENST00000368979 GBP3Q9H0R5 595 aa26.26■■□□□ 1.79
SNX3-203ENST00000368979 VPS16Q9H269 839 aa26.26■■□□□ 1.79
SNX3-203ENST00000368979 IKZF4Q9H2S9 585 aa26.26■■□□□ 1.79
SNX3-203ENST00000368979 TUT1Q9H6E5 874 aaKnown RBP26.26■■□□□ 1.79
SNX3-203ENST00000368979 SAGE1Q9NXZ1 904 aa26.26■■□□□ 1.79
SNX3-203ENST00000368979 SRRDQ9UH36 339 aa26.26■■□□□ 1.79
SNX3-203ENST00000368979 ADGRA3Q8IWK6 1321 aa26.26■■□□□ 1.79
SNX3-203ENST00000368979 SIP14410 1827 aa26.26■■□□□ 1.79
SNX3-203ENST00000368979 CETN3O15182 167 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms