RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 MRPL11Q9Y3B7 192 aaKnown RBP12.03□□□□□ -0.48
TUBE1-201ENST00000368657 KDM3AQ9Y4C1 1321 aa12.03□□□□□ -0.48
TUBE1-201ENST00000368657 LOXHD1Q8IVV2 1947 aa12.03□□□□□ -0.48
TUBE1-201ENST00000368657 CARNS1A5YM72 827 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 RRN3P2A6NIE6 340 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 IPO8O15397 1037 aaKnown RBP12.02□□□□□ -0.49
TUBE1-201ENST00000368657 NMT2O60551 498 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 IFIT2P09913 472 aaKnown RBP12.02□□□□□ -0.49
TUBE1-201ENST00000368657 ZNF806P0C7X5 589 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 CTSAP10619 480 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 FGFR1P11362 822 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 TDGF1P13385 188 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 ALDH7A1P49419 539 aaKnown RBP12.02□□□□□ -0.49
TUBE1-201ENST00000368657 PFKPQ01813 784 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 SLFN5Q08AF3 891 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 HTR4Q13639 388 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 GRIK4Q16099 956 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 HSP90AB4PQ58FF6 505 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 MARCH8Q5T0T0 291 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 IFNL3Q8IZI9 196 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 LRRC43Q8N309 656 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 NME8Q8N427 588 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 TMEM169Q96HH4 297 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 SCNM1Q9BWG6 230 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 ZBP1Q9H171 429 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 BOLA2Q9H3K6 86 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 DPP7Q9UHL4 492 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 GPSM3Q9Y4H4 160 aa12.02□□□□□ -0.49
TUBE1-201ENST00000368657 ZFP37Q9Y6Q3 630 aaPredicted RBP12.02□□□□□ -0.49
TUBE1-201ENST00000368657 IGSF10Q6WRI0 2623 aa12.01□□□□□ -0.49
TUBE1-201ENST00000368657 TOP1P11387 765 aaKnown RBP12.01□□□□□ -0.49
TUBE1-201ENST00000368657 ATP5JP18859 108 aa12.01□□□□□ -0.49
TUBE1-201ENST00000368657 SPINK2P20155 84 aa12.01□□□□□ -0.49
TUBE1-201ENST00000368657 KLRC2P26717 231 aa12.01□□□□□ -0.49
TUBE1-201ENST00000368657 PBX3P40426 434 aa12.01□□□□□ -0.49
TUBE1-201ENST00000368657 MTAPQ13126 283 aa12.01□□□□□ -0.49
TUBE1-201ENST00000368657 ELMSAN1Q6PJG2 1045 aa12.01□□□□□ -0.49
TUBE1-201ENST00000368657 TMEM92Q6UXU6 159 aa12.01□□□□□ -0.49
TUBE1-201ENST00000368657 STOX1Q6ZVD7 989 aa12.01□□□□□ -0.49
TUBE1-201ENST00000368657 CYFIP1Q7L576 1253 aa12.01□□□□□ -0.49
TUBE1-201ENST00000368657 TRIM50Q86XT4 487 aa12.01□□□□□ -0.49
TUBE1-201ENST00000368657 ABI1Q8IZP0 508 aa12.01□□□□□ -0.49
TUBE1-201ENST00000368657 IER2Q9BTL4 223 aa12.01□□□□□ -0.49
TUBE1-201ENST00000368657 EMILIN2Q9BXX0 1053 aa12.01□□□□□ -0.49
TUBE1-201ENST00000368657 NACAP1Q9BZK3 213 aa12.01□□□□□ -0.49
TUBE1-201ENST00000368657 EPB41L4AQ9HCS5 686 aaPredicted RBP12.01□□□□□ -0.49
TUBE1-201ENST00000368657 IL1RAPL2Q9NP60 686 aa12.01□□□□□ -0.49
TUBE1-201ENST00000368657 MRPS17Q9Y2R5 130 aaKnown RBP12.01□□□□□ -0.49
TUBE1-201ENST00000368657 NUMBLQ9Y6R0 609 aa12.01□□□□□ -0.49
TUBE1-201ENST00000368657 CLUHO75153 1309 aa12.01□□□□□ -0.49
TUBE1-201ENST00000368657 CCDC195A0A1B0GUA6 201 aa12□□□□□ -0.49
TUBE1-201ENST00000368657 GPR182O15218 404 aa12□□□□□ -0.49
TUBE1-201ENST00000368657 MGEA5O60502 916 aa12□□□□□ -0.49
TUBE1-201ENST00000368657 CFBP00751 764 aa12□□□□□ -0.49
TUBE1-201ENST00000368657 PDHBP11177 359 aa12□□□□□ -0.49
TUBE1-201ENST00000368657 NOVA1P51513 510 aaKnown RBP12□□□□□ -0.49
TUBE1-201ENST00000368657 CLCN4P51793 760 aa12□□□□□ -0.49
TUBE1-201ENST00000368657 ZNF543Q08ER8 600 aa12□□□□□ -0.49
TUBE1-201ENST00000368657 PGM5Q15124 567 aa12□□□□□ -0.49
TUBE1-201ENST00000368657 GNPTABQ3T906 1256 aa12□□□□□ -0.49
TUBE1-201ENST00000368657 DDX53Q86TM3 631 aaKnown RBP12□□□□□ -0.49
TUBE1-201ENST00000368657 SAMD3Q8N6K7 520 aa12□□□□□ -0.49
TUBE1-201ENST00000368657 RHPN1Q8TCX5 695 aa12□□□□□ -0.49
TUBE1-201ENST00000368657 TNPO1Q92973 898 aaKnown RBP12□□□□□ -0.49
TUBE1-201ENST00000368657 FAM49AQ9H0Q0 323 aaPredicted RBP12□□□□□ -0.49
TUBE1-201ENST00000368657 FAM217BQ9NTX9 383 aaPredicted RBP12□□□□□ -0.49
TUBE1-201ENST00000368657 NEUROG3Q9Y4Z2 214 aa12□□□□□ -0.49
TUBE1-201ENST00000368657 PCDHA1Q9Y5I3 950 aa12□□□□□ -0.49
TUBE1-201ENST00000368657 C2orf16Q68DN1 1984 aa11.99□□□□□ -0.49
TUBE1-201ENST00000368657 HRO43593 1189 aa11.99□□□□□ -0.49
TUBE1-201ENST00000368657 RPS6KA5O75582 802 aa11.99□□□□□ -0.49
TUBE1-201ENST00000368657 CCND2P30279 289 aa11.99□□□□□ -0.49
TUBE1-201ENST00000368657 HSD17B4P51659 736 aa11.99□□□□□ -0.49
TUBE1-201ENST00000368657 KRT76Q01546 638 aa11.99□□□□□ -0.49
TUBE1-201ENST00000368657 PPARAQ07869 468 aa11.99□□□□□ -0.49
TUBE1-201ENST00000368657 ADCY1Q08828 1119 aa11.99□□□□□ -0.49
TUBE1-201ENST00000368657 ZNF252P-AS1Q0IIN9 211 aa11.99□□□□□ -0.49
TUBE1-201ENST00000368657 WTAPQ15007 396 aa11.99□□□□□ -0.49
TUBE1-201ENST00000368657 SF3A2Q15428 464 aaKnown RBP11.99□□□□□ -0.49
TUBE1-201ENST00000368657 TMEM266Q2M3C6 531 aa11.99□□□□□ -0.49
TUBE1-201ENST00000368657 GPATCH4Q5T3I0 446 aaKnown RBP11.99□□□□□ -0.49
TUBE1-201ENST00000368657 C19orf48Q6RUI8 117 aa11.99□□□□□ -0.49
TUBE1-201ENST00000368657 AUTS2Q8WXX7 1259 aa11.99□□□□□ -0.49
TUBE1-201ENST00000368657 GPKOWQ92917 476 aaPredicted RBP eCLIP11.99□□□□□ -0.496e-6■■□□□ 12
TUBE1-201ENST00000368657 TMEM47Q9BQJ4 181 aa11.99□□□□□ -0.49
TUBE1-201ENST00000368657 ERAP1Q9NZ08 941 aa11.99□□□□□ -0.49
TUBE1-201ENST00000368657 STK39Q9UEW8 545 aa11.99□□□□□ -0.49
TUBE1-201ENST00000368657 EXOC6BQ9Y2D4 811 aa11.99□□□□□ -0.49
TUBE1-201ENST00000368657 COL4A3Q01955 1670 aa11.98□□□□□ -0.49
TUBE1-201ENST00000368657 SPATA31C2B4DYI2 1134 aa11.98□□□□□ -0.49
TUBE1-201ENST00000368657 STAM2O75886 525 aa11.98□□□□□ -0.49
TUBE1-201ENST00000368657 CD72P21854 359 aa11.98□□□□□ -0.49
TUBE1-201ENST00000368657 CCR3P51677 355 aa11.98□□□□□ -0.49
TUBE1-201ENST00000368657 GHRHRQ02643 423 aa11.98□□□□□ -0.49
TUBE1-201ENST00000368657 TMEM62Q0P6H9 643 aa11.98□□□□□ -0.49
TUBE1-201ENST00000368657 FZD5Q13467 585 aa11.98□□□□□ -0.49
TUBE1-201ENST00000368657 ZNF852Q6ZMS4 543 aa11.98□□□□□ -0.49
TUBE1-201ENST00000368657 OSBP2Q969R2 916 aa11.98□□□□□ -0.49
TUBE1-201ENST00000368657 LOXL4Q96JB6 756 aa11.98□□□□□ -0.49
TUBE1-201ENST00000368657 BBC3Q96PG8 261 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms