RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 CAPN12Q6ZSI9 719 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 TTC30BQ8N4P2 665 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 SH3TC2Q8TF17 1288 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 RBAKQ9NYW8 714 aaPredicted RBP11.57□□□□□ -0.56
PTPRK-205ENST00000368213 HIP1RO75146 1068 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 INPP5BP32019 993 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 GARSP41250 739 aaKnown RBP11.57□□□□□ -0.56
PTPRK-205ENST00000368213 CDCA5Q96FF9 252 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 SEL1LQ9UBV2 794 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 RWDD2AQ9UIY3 292 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 AGO2Q9UKV8 859 aaKnown RBP11.57□□□□□ -0.56
PTPRK-205ENST00000368213 MOCS3O95396 460 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 LARGE1O95461 756 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 SUPT20HL2P0C7V6 817 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 CDC27P30260 824 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 RPS6KA2Q15349 733 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 CROCCP2Q86T23 111 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 HBP1O60381 514 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 DGAT1O75907 488 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 NR3C1P04150 777 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 GCLMP48507 274 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 ALDH7A1P49419 539 aaKnown RBP11.57□□□□□ -0.56
PTPRK-205ENST00000368213 EVCP57679 992 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 PDIA6Q15084 440 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 PPP2R5EQ16537 467 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 DARS2Q6PI48 645 aaKnown RBP11.57□□□□□ -0.56
PTPRK-205ENST00000368213 TTC39CQ8N584 583 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 SPDYE1Q8NFV5 336 aaPredicted RBP11.57□□□□□ -0.56
PTPRK-205ENST00000368213 SAAL1Q96ER3 474 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 YME1L1Q96TA2 773 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 GJB4Q9NTQ9 266 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 M0QYV0 167 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 APOEP02649 317 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 PGK2P07205 417 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 PDHBP11177 359 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 RAG1P15918 1043 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 BTBD8Q5XKL5 378 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 RNF208Q9H0X6 261 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 TUFT1Q9NNX1 390 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 ABCF3Q9NUQ8 709 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 HYOU1Q9Y4L1 999 aa11.57□□□□□ -0.56
PTPRK-205ENST00000368213 VIMP08670 466 aaKnown RBP11.56□□□□□ -0.56
PTPRK-205ENST00000368213 PSMA2P25787 234 aa11.56□□□□□ -0.56
PTPRK-205ENST00000368213 HPDP32754 393 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-205ENST00000368213 TMEM270Q6UE05 265 aa11.56□□□□□ -0.56
PTPRK-205ENST00000368213 GPD1LQ8N335 351 aa11.56□□□□□ -0.56
PTPRK-205ENST00000368213 SRBD1Q8N5C6 995 aaKnown RBP11.56□□□□□ -0.56
PTPRK-205ENST00000368213 LSM7Q9UK45 103 aaKnown RBP11.56□□□□□ -0.56
PTPRK-205ENST00000368213 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.56□□□□□ -0.56
PTPRK-205ENST00000368213 MOCS2O96007 188 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-205ENST00000368213 THOC5Q13769 683 aaKnown RBP11.56□□□□□ -0.56
PTPRK-205ENST00000368213 POTEAQ6S8J7 498 aa11.56□□□□□ -0.56
PTPRK-205ENST00000368213 TADA2BQ86TJ2 420 aa11.56□□□□□ -0.56
PTPRK-205ENST00000368213 MYLK4Q86YV6 388 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-205ENST00000368213 PDCD6IPQ8WUM4 868 aaKnown RBP11.56□□□□□ -0.56
PTPRK-205ENST00000368213 CHMP6Q96FZ7 201 aa11.56□□□□□ -0.56
PTPRK-205ENST00000368213 THAP9Q9H5L6 903 aa11.56□□□□□ -0.56
PTPRK-205ENST00000368213 LMNB2Q03252 620 aa11.56□□□□□ -0.56
PTPRK-205ENST00000368213 EFCAB12Q6NXP0 572 aa11.56□□□□□ -0.56
PTPRK-205ENST00000368213 SMAP1Q8IYB5 467 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-205ENST00000368213 HSPH1Q92598 858 aa11.56□□□□□ -0.56
PTPRK-205ENST00000368213 N4BP2L2Q92802 583 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-205ENST00000368213 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.56□□□□□ -0.56
PTPRK-205ENST00000368213 LRRD1A4D1F6 860 aa11.56□□□□□ -0.56
PTPRK-205ENST00000368213 PPARGP37231 505 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-205ENST00000368213 YWHAGP61981 247 aaKnown RBP eCLIP11.56□□□□□ -0.56
PTPRK-205ENST00000368213 NFIAQ12857 509 aa11.56□□□□□ -0.56
PTPRK-205ENST00000368213 COASYQ13057 564 aa11.56□□□□□ -0.56
PTPRK-205ENST00000368213 TNIP3Q96KP6 325 aa11.56□□□□□ -0.56
PTPRK-205ENST00000368213 DDX50Q9BQ39 737 aaKnown RBP11.56□□□□□ -0.56
PTPRK-205ENST00000368213 SLC38A7Q9NVC3 462 aa11.56□□□□□ -0.56
PTPRK-205ENST00000368213 CXCL11O14625 94 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 ASAP2O43150 1006 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 CACNB2Q08289 660 aaPredicted RBP11.55□□□□□ -0.56
PTPRK-205ENST00000368213 DENND2CQ68D51 928 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 DDX53Q86TM3 631 aaKnown RBP11.55□□□□□ -0.56
PTPRK-205ENST00000368213 TMEM35BQ8NCS4 154 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 ACER1Q8TDN7 264 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 TMEM169Q96HH4 297 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 ENTPD7Q9NQZ7 604 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.55□□□□□ -0.56
PTPRK-205ENST00000368213 ITSN1Q15811 1721 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 MAFGO15525 162 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 RFC5P40937 340 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 RPS6P62753 249 aaKnown RBP11.55□□□□□ -0.56
PTPRK-205ENST00000368213 PRKCEQ02156 737 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 DUOXA2Q1HG44 320 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 XRRA1Q6P2D8 792 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 HAUS6Q7Z4H7 955 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 TAAR1Q96RJ0 339 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 MMTAG2Q9BU76 263 aaKnown RBP11.55□□□□□ -0.56
PTPRK-205ENST00000368213 ZWILCHQ9H900 591 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 STAP1Q9ULZ2 295 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 MAP3K7O43318 606 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 TBXAS1P24557 533 aaPredicted RBP11.55□□□□□ -0.56
PTPRK-205ENST00000368213 TOB2Q14106 344 aaPredicted RBP11.55□□□□□ -0.56
PTPRK-205ENST00000368213 BBOF1Q8ND07 529 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 SEPT5Q99719 369 aaPredicted RBP11.55□□□□□ -0.56
PTPRK-205ENST00000368213 HMX1Q9NP08 348 aaPredicted RBP11.55□□□□□ -0.56
PTPRK-205ENST00000368213 FBXO28Q9NVF7 368 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms