RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 GALCP54803 685 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 RNASE9P60153 205 aaKnown RBP15.54■□□□□ 0.08
CD48-201ENST00000368045 KCNA1Q09470 495 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 B4GALNT4Q76KP1 1039 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 DAAM2Q86T65 1068 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 FAM178BQ8IXR5 827 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 ARFGAP2Q8N6H7 521 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 OLIG1Q8TAK6 271 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 LNX1Q8TBB1 728 aaPredicted RBP15.54■□□□□ 0.08
CD48-201ENST00000368045 PIGOQ8TEQ8 1089 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 CHURC1Q8WUH1 139 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 TMEM174Q8WUU8 243 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 SEC14L1Q92503 715 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 FIZ1Q96SL8 496 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 NAP1L3Q99457 506 aaPredicted RBP15.54■□□□□ 0.08
CD48-201ENST00000368045 SYT11Q9BT88 431 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 INTS2Q9H0H0 1204 aaKnown RBP15.54■□□□□ 0.08
CD48-201ENST00000368045 AGPAT3Q9NRZ7 376 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 TMX2Q9Y320 296 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 MRPL11Q9Y3B7 192 aaKnown RBP15.54■□□□□ 0.08
CD48-201ENST00000368045 CPP00450 1065 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 MMP10P09238 476 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 VIL1P09327 827 aaKnown RBP15.54■□□□□ 0.08
CD48-201ENST00000368045 NR1D1P20393 614 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 ECHS1P30084 290 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 JAG1P78504 1218 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 ALCAMQ13740 583 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 HLTFQ14527 1009 aaKnown RBP eCLIP15.54■□□□□ 0.08
CD48-201ENST00000368045 CEP55Q53EZ4 464 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 COL23A1Q86Y22 540 aaPredicted RBP15.54■□□□□ 0.08
CD48-201ENST00000368045 CTNNBL1Q8WYA6 563 aaPredicted RBP15.54■□□□□ 0.08
CD48-201ENST00000368045 ZNF622Q969S3 477 aaKnown RBP eCLIP15.54■□□□□ 0.08
CD48-201ENST00000368045 AKT1S1Q96B36 256 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 CSRNP1Q96S65 589 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 RANBP17Q9H2T7 1088 aaKnown RBP15.54■□□□□ 0.08
CD48-201ENST00000368045 TMBIM4Q9HC24 238 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 DNAJC12Q9UKB3 198 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 PLAAQ9Y263 795 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 BIRC3Q13489 604 aa15.53■□□□□ 0.08
CD48-201ENST00000368045 DRAP1Q14919 205 aaPredicted RBP15.53■□□□□ 0.08
CD48-201ENST00000368045 SPDYCQ5MJ68 293 aa15.53■□□□□ 0.08
CD48-201ENST00000368045 GJB7Q6PEY0 223 aa15.53■□□□□ 0.08
CD48-201ENST00000368045 KRT27Q7Z3Y8 459 aa15.53■□□□□ 0.08
CD48-201ENST00000368045 PAGR1Q9BTK6 254 aa15.53■□□□□ 0.08
CD48-201ENST00000368045 STRA6Q9BX79 667 aa15.53■□□□□ 0.08
CD48-201ENST00000368045 PLEKHA4Q9H4M7 779 aa15.53■□□□□ 0.08
CD48-201ENST00000368045 TDRD3Q9H7E2 651 aaKnown RBP15.53■□□□□ 0.08
CD48-201ENST00000368045 FAM114A2Q9NRY5 505 aa15.53■□□□□ 0.08
CD48-201ENST00000368045 APEX2Q9UBZ4 518 aa15.53■□□□□ 0.08
CD48-201ENST00000368045 SFI1A8K8P3 1242 aa15.52■□□□□ 0.08
CD48-201ENST00000368045 CFBP00751 764 aa15.52■□□□□ 0.08
CD48-201ENST00000368045 MAPTP10636 758 aaKnown RBP15.52■□□□□ 0.08
CD48-201ENST00000368045 HADHBP55084 474 aaKnown RBP15.52■□□□□ 0.08
CD48-201ENST00000368045 MYL7Q01449 175 aa15.52■□□□□ 0.08
CD48-201ENST00000368045 PPATQ06203 517 aa15.52■□□□□ 0.08
CD48-201ENST00000368045 PDCLQ13371 301 aa15.52■□□□□ 0.08
CD48-201ENST00000368045 KIF22Q14807 665 aa15.52■□□□□ 0.08
CD48-201ENST00000368045 ZC2HC1CQ53FD0 456 aaPredicted RBP15.52■□□□□ 0.08
CD48-201ENST00000368045 B3GNT9Q6UX72 402 aa15.52■□□□□ 0.08
CD48-201ENST00000368045 RUFY4Q6ZNE9 571 aa15.52■□□□□ 0.08
CD48-201ENST00000368045 FAM160B2Q86V87 743 aa15.52■□□□□ 0.08
CD48-201ENST00000368045 SH2D3CQ8N5H7 860 aa15.52■□□□□ 0.08
CD48-201ENST00000368045 RIT2Q99578 217 aa15.52■□□□□ 0.08
CD48-201ENST00000368045 TEKT3Q9BXF9 490 aa15.52■□□□□ 0.08
CD48-201ENST00000368045 DEFB129Q9H1M3 183 aa15.52■□□□□ 0.08
CD48-201ENST00000368045 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.52■□□□□ 0.08
CD48-201ENST00000368045 TMOD2Q9NZR1 351 aa15.52■□□□□ 0.08
CD48-201ENST00000368045 P4HA2O15460 535 aa15.52■□□□□ 0.07
CD48-201ENST00000368045 MYZAPP0CAP1 466 aa15.52■□□□□ 0.07
CD48-201ENST00000368045 POLD1P28340 1107 aa15.52■□□□□ 0.07
CD48-201ENST00000368045 HSD17B3P37058 310 aa15.52■□□□□ 0.07
CD48-201ENST00000368045 RRP1BQ14684 758 aaKnown RBP15.52■□□□□ 0.07
CD48-201ENST00000368045 TCEAL1Q15170 157 aa15.52■□□□□ 0.07
CD48-201ENST00000368045 ODR4Q5SWX8 454 aa15.52■□□□□ 0.07
CD48-201ENST00000368045 CEP85LQ5SZL2 805 aa15.52■□□□□ 0.07
CD48-201ENST00000368045 GLYCTKQ8IVS8 523 aa15.52■□□□□ 0.07
CD48-201ENST00000368045 AP1M1Q9BXS5 423 aa15.52■□□□□ 0.07
CD48-201ENST00000368045 EPN3Q9H201 632 aa15.52■□□□□ 0.07
CD48-201ENST00000368045 CARD9Q9H257 536 aa15.52■□□□□ 0.07
CD48-201ENST00000368045 GOLPH3Q9H4A6 298 aa15.52■□□□□ 0.07
CD48-201ENST00000368045 BCAS3Q9H6U6 928 aa15.52■□□□□ 0.07
CD48-201ENST00000368045 FAM169AQ9Y6X4 670 aa15.52■□□□□ 0.07
CD48-201ENST00000368045 ARHGEF35A5YM69 484 aa15.51■□□□□ 0.07
CD48-201ENST00000368045 H0YGN5 161 aa15.51■□□□□ 0.07
CD48-201ENST00000368045 NDUFAB1O14561 156 aa15.51■□□□□ 0.07
CD48-201ENST00000368045 CHMP2AO43633 222 aa15.51■□□□□ 0.07
CD48-201ENST00000368045 BUB1BO60566 1050 aaPredicted RBP15.51■□□□□ 0.07
CD48-201ENST00000368045 PPP1R37O75864 691 aa15.51■□□□□ 0.07
CD48-201ENST00000368045 TAL1P17542 331 aaPredicted RBP15.51■□□□□ 0.07
CD48-201ENST00000368045 TNFAIP3P21580 790 aa15.51■□□□□ 0.07
CD48-201ENST00000368045 LSP1P33241 339 aa15.51■□□□□ 0.07
CD48-201ENST00000368045 CYP2J2P51589 502 aa15.51■□□□□ 0.07
CD48-201ENST00000368045 BFSP1Q12934 665 aa15.51■□□□□ 0.07
CD48-201ENST00000368045 TRADDQ15628 312 aa15.51■□□□□ 0.07
CD48-201ENST00000368045 KCTD16Q68DU8 428 aa15.51■□□□□ 0.07
CD48-201ENST00000368045 TADA2BQ86TJ2 420 aa15.51■□□□□ 0.07
CD48-201ENST00000368045 RHOT2Q8IXI1 618 aa15.51■□□□□ 0.07
CD48-201ENST00000368045 C12orf56Q8IXR9 622 aa15.51■□□□□ 0.07
CD48-201ENST00000368045 SPICE1Q8N0Z3 855 aa15.51■□□□□ 0.07
CD48-201ENST00000368045 SLC35G2Q8TBE7 412 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms