RNA–Protein interactions for RNA: ENST00000366792.3

PARP1-202, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 3 BASIC

Gene PARP1, Length 553 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-202ENST00000366792 TMEM143Q96AN5 459 aa23.47■■□□□ 1.35
PARP1-202ENST00000366792 INTS4Q96HW7 963 aaKnown RBP23.47■■□□□ 1.35
PARP1-202ENST00000366792 NLRP4Q96MN2 994 aa23.47■■□□□ 1.35
PARP1-202ENST00000366792 TSPYL2Q9H2G4 693 aaPredicted RBP23.47■■□□□ 1.35
PARP1-202ENST00000366792 ANKEF1Q9NU02 776 aa23.47■■□□□ 1.35
PARP1-202ENST00000366792 CDH23Q9H251 3354 aa23.47■■□□□ 1.35
PARP1-202ENST00000366792 A0A087WWV3 80 aa23.46■■□□□ 1.35
PARP1-202ENST00000366792 DARSP14868 501 aaKnown RBP23.46■■□□□ 1.35
PARP1-202ENST00000366792 HAUS3Q68CZ6 603 aa23.46■■□□□ 1.35
PARP1-202ENST00000366792 HSCBQ8IWL3 235 aa23.46■■□□□ 1.35
PARP1-202ENST00000366792 PSPC1Q8WXF1 523 aaKnown RBP23.46■■□□□ 1.35
PARP1-202ENST00000366792 SNX21Q969T3 373 aa23.46■■□□□ 1.35
PARP1-202ENST00000366792 MTRQ99707 1265 aa23.46■■□□□ 1.35
PARP1-202ENST00000366792 ADAM2Q99965 735 aa23.46■■□□□ 1.35
PARP1-202ENST00000366792 POLR3CQ9BUI4 534 aaPredicted RBP23.46■■□□□ 1.35
PARP1-202ENST00000366792 GCOM2Q9BZD3 368 aaPredicted RBP23.46■■□□□ 1.35
PARP1-202ENST00000366792 RAB34Q9BZG1 259 aa23.46■■□□□ 1.35
PARP1-202ENST00000366792 LRWD1Q9UFC0 647 aa23.46■■□□□ 1.35
PARP1-202ENST00000366792 MYO9BQ13459 2157 aa23.45■■□□□ 1.35
PARP1-202ENST00000366792 CHD9Q3L8U1 2897 aa23.45■■□□□ 1.34
PARP1-202ENST00000366792 A0A087WZ62 844 aa23.45■■□□□ 1.34
PARP1-202ENST00000366792 LINC01553A4QN01 128 aa23.45■■□□□ 1.34
PARP1-202ENST00000366792 GAS2O43903 313 aaKnown RBP23.45■■□□□ 1.34
PARP1-202ENST00000366792 MGEA5O60502 916 aa23.45■■□□□ 1.34
PARP1-202ENST00000366792 POTEGQ6S5H5 508 aa23.45■■□□□ 1.34
PARP1-202ENST00000366792 SPRED2Q7Z698 418 aa23.45■■□□□ 1.34
PARP1-202ENST00000366792 FERMT3Q86UX7 667 aa23.45■■□□□ 1.34
PARP1-202ENST00000366792 ZNF410Q86VK4 478 aa23.45■■□□□ 1.34
PARP1-202ENST00000366792 KSR1Q8IVT5 923 aa23.45■■□□□ 1.34
PARP1-202ENST00000366792 TCP11Q8WWU5 503 aa23.45■■□□□ 1.34
PARP1-202ENST00000366792 FDXACB1Q9BRP7 624 aaPredicted RBP23.45■■□□□ 1.34
PARP1-202ENST00000366792 MTUS1Q9ULD2 1270 aa23.45■■□□□ 1.34
PARP1-202ENST00000366792 COL4A3BPQ9Y5P4 624 aa23.45■■□□□ 1.34
PARP1-202ENST00000366792 TTC3P53804 2025 aa23.45■■□□□ 1.34
PARP1-202ENST00000366792 FGFR4P22455 802 aa23.44■■□□□ 1.34
PARP1-202ENST00000366792 IGFBP4P22692 258 aa23.44■■□□□ 1.34
PARP1-202ENST00000366792 RPA1P27694 616 aa23.44■■□□□ 1.34
PARP1-202ENST00000366792 CCT6AP40227 531 aaKnown RBP23.44■■□□□ 1.34
PARP1-202ENST00000366792 PRPHP41219 470 aa23.44■■□□□ 1.34
PARP1-202ENST00000366792 RARRES1P49788 294 aa23.44■■□□□ 1.34
PARP1-202ENST00000366792 DTHD1Q6ZMT9 781 aa23.44■■□□□ 1.34
PARP1-202ENST00000366792 FAM43BQ6ZT52 329 aaPredicted RBP23.44■■□□□ 1.34
PARP1-202ENST00000366792 BRAPQ7Z569 592 aa23.44■■□□□ 1.34
PARP1-202ENST00000366792 NPAS4Q8IUM7 802 aa23.44■■□□□ 1.34
PARP1-202ENST00000366792 MAFAQ8NHW3 353 aaPredicted RBP23.44■■□□□ 1.34
PARP1-202ENST00000366792 SP7Q8TDD2 431 aaPredicted RBP23.44■■□□□ 1.34
PARP1-202ENST00000366792 TGS1Q96RS0 853 aaKnown RBP23.44■■□□□ 1.34
PARP1-202ENST00000366792 ATP6V0A4Q9HBG4 840 aa23.44■■□□□ 1.34
PARP1-202ENST00000366792 LRFN2Q9ULH4 789 aa23.44■■□□□ 1.34
PARP1-202ENST00000366792 RFXAPO00287 272 aa23.43■■□□□ 1.34
PARP1-202ENST00000366792 CSDE1O75534 798 aaKnown RBP23.43■■□□□ 1.34
PARP1-202ENST00000366792 STAG3L1P0CL83 205 aa23.43■■□□□ 1.34
PARP1-202ENST00000366792 XRCC6P12956 609 aaKnown RBP eCLIP23.43■■□□□ 1.34
PARP1-202ENST00000366792 SYT1P21579 422 aa23.43■■□□□ 1.34
PARP1-202ENST00000366792 ATP2C1P98194 919 aaPredicted RBP23.43■■□□□ 1.34
PARP1-202ENST00000366792 PDIA5Q14554 519 aa23.43■■□□□ 1.34
PARP1-202ENST00000366792 PRPF31Q8WWY3 499 aaKnown RBP23.43■■□□□ 1.34
PARP1-202ENST00000366792 NACC1Q96RE7 527 aa23.43■■□□□ 1.34
PARP1-202ENST00000366792 RGS18Q9NS28 235 aa23.43■■□□□ 1.34
PARP1-202ENST00000366792 C1orf112Q9NSG2 853 aa23.43■■□□□ 1.34
PARP1-202ENST00000366792 EPOPA6NHQ4 379 aa23.42■■□□□ 1.34
PARP1-202ENST00000366792 USO1O60763 962 aaKnown RBP23.42■■□□□ 1.34
PARP1-202ENST00000366792 DGAT1O75907 488 aa23.42■■□□□ 1.34
PARP1-202ENST00000366792 SRGAP2CP0DJJ0 459 aa23.42■■□□□ 1.34
PARP1-202ENST00000366792 ZSCAN20P17040 1043 aaPredicted RBP23.42■■□□□ 1.34
PARP1-202ENST00000366792 SARSP49591 514 aaKnown RBP23.42■■□□□ 1.34
PARP1-202ENST00000366792 ADGRE1Q14246 886 aa23.42■■□□□ 1.34
PARP1-202ENST00000366792 SLC24A5Q71RS6 500 aa23.42■■□□□ 1.34
PARP1-202ENST00000366792 IGSF22Q8N9C0 903 aa23.42■■□□□ 1.34
PARP1-202ENST00000366792 SNX29Q8TEQ0 813 aa23.42■■□□□ 1.34
PARP1-202ENST00000366792 INO80BQ9C086 356 aaPredicted RBP23.42■■□□□ 1.34
PARP1-202ENST00000366792 XPNPEP1Q9NQW7 623 aa23.42■■□□□ 1.34
PARP1-202ENST00000366792 STK24Q9Y6E0 443 aa23.42■■□□□ 1.34
PARP1-202ENST00000366792 ADGRA3Q8IWK6 1321 aa23.41■■□□□ 1.34
PARP1-202ENST00000366792 SFPQP23246 707 aaKnown RBP eCLIP23.41■■□□□ 1.34
PARP1-202ENST00000366792 ERVK-21P61565 698 aa23.41■■□□□ 1.34
PARP1-202ENST00000366792 LAMTOR4Q0VGL1 99 aa23.41■■□□□ 1.34
PARP1-202ENST00000366792 IL17AQ16552 155 aa23.41■■□□□ 1.34
PARP1-202ENST00000366792 C17orf80Q9BSJ5 609 aa23.41■■□□□ 1.34
PARP1-202ENST00000366792 DBR1Q9UK59 544 aaKnown RBP23.41■■□□□ 1.34
PARP1-202ENST00000366792 PCDHB7Q9Y5E2 793 aa23.41■■□□□ 1.34
PARP1-202ENST00000366792 COL4A6Q14031 1691 aa23.41■■□□□ 1.34
PARP1-202ENST00000366792 PP2D1A8MPX8 630 aa23.4■■□□□ 1.34
PARP1-202ENST00000366792 DGKIO75912 1065 aa23.4■■□□□ 1.34
PARP1-202ENST00000366792 HSP90AA1P07900 732 aaKnown RBP23.4■■□□□ 1.34
PARP1-202ENST00000366792 BTG3Q14201 252 aaPredicted RBP23.4■■□□□ 1.34
PARP1-202ENST00000366792 DSC3Q14574 896 aa23.4■■□□□ 1.34
PARP1-202ENST00000366792 KRT79Q5XKE5 535 aa23.4■■□□□ 1.34
PARP1-202ENST00000366792 FIBCD1Q8N539 461 aa23.4■■□□□ 1.34
PARP1-202ENST00000366792 RNF149Q8NC42 400 aa23.4■■□□□ 1.34
PARP1-202ENST00000366792 RNF216Q9NWF9 866 aaPredicted RBP23.4■■□□□ 1.34
PARP1-202ENST00000366792 COL4A4P53420 1690 aaPredicted RBP23.4■■□□□ 1.34
PARP1-202ENST00000366792 CHD7Q9P2D1 2997 aa23.39■■□□□ 1.34
PARP1-202ENST00000366792 ARHGEF35A5YM69 484 aa23.39■■□□□ 1.33
PARP1-202ENST00000366792 VWA3AA6NCI4 1184 aa23.39■■□□□ 1.33
PARP1-202ENST00000366792 C9IYK1 514 aa23.39■■□□□ 1.33
PARP1-202ENST00000366792 ASAP2O43150 1006 aa23.39■■□□□ 1.33
PARP1-202ENST00000366792 MUTP22033 750 aa23.39■■□□□ 1.33
PARP1-202ENST00000366792 MXD4Q14582 209 aaPredicted RBP23.39■■□□□ 1.33
PARP1-202ENST00000366792 ECM1Q16610 540 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms