RNA–Protein interactions for RNA: ENST00000366747.7

MRPL55-218, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-218ENST00000366747 NACC1Q96RE7 527 aa16.33■□□□□ 0.2
MRPL55-218ENST00000366747 MTRQ99707 1265 aa16.33■□□□□ 0.2
MRPL55-218ENST00000366747 DBR1Q9UK59 544 aaKnown RBP16.33■□□□□ 0.2
MRPL55-218ENST00000366747 SIP14410 1827 aa16.33■□□□□ 0.2
MRPL55-218ENST00000366747 DENND3A2RUS2 1198 aa16.32■□□□□ 0.2
MRPL55-218ENST00000366747 SPATA31C1P0DKV0 1188 aa16.32■□□□□ 0.2
MRPL55-218ENST00000366747 SFPQP23246 707 aaKnown RBP eCLIP16.32■□□□□ 0.2
MRPL55-218ENST00000366747 SARSP49591 514 aaKnown RBP16.32■□□□□ 0.2
MRPL55-218ENST00000366747 ATP2C1P98194 919 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-218ENST00000366747 MXD4Q14582 209 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-218ENST00000366747 WDR81Q562E7 1941 aa16.32■□□□□ 0.2
MRPL55-218ENST00000366747 DTHD1Q6ZMT9 781 aa16.32■□□□□ 0.2
MRPL55-218ENST00000366747 SLC24A5Q71RS6 500 aa16.32■□□□□ 0.2
MRPL55-218ENST00000366747 CATSPER3Q86XQ3 398 aa16.32■□□□□ 0.2
MRPL55-218ENST00000366747 LINC01599Q8WXQ3 324 aa16.32■□□□□ 0.2
MRPL55-218ENST00000366747 RSPH1Q8WYR4 309 aa16.32■□□□□ 0.2
MRPL55-218ENST00000366747 TGS1Q96RS0 853 aaKnown RBP16.32■□□□□ 0.2
MRPL55-218ENST00000366747 TMX1Q9H3N1 280 aa16.32■□□□□ 0.2
MRPL55-218ENST00000366747 ELAC1Q9H777 363 aaKnown RBP16.32■□□□□ 0.2
MRPL55-218ENST00000366747 CDHR5Q9HBB8 845 aa16.32■□□□□ 0.2
MRPL55-218ENST00000366747 ATP6V0A4Q9HBG4 840 aa16.32■□□□□ 0.2
MRPL55-218ENST00000366747 RGS18Q9NS28 235 aa16.32■□□□□ 0.2
MRPL55-218ENST00000366747 LRWD1Q9UFC0 647 aa16.32■□□□□ 0.2
MRPL55-218ENST00000366747 RWDD3Q9Y3V2 267 aa16.32■□□□□ 0.2
MRPL55-218ENST00000366747 COL4A3BPQ9Y5P4 624 aa16.32■□□□□ 0.2
MRPL55-218ENST00000366747 LAMA2P24043 3122 aaKnown RBP16.32■□□□□ 0.2
MRPL55-218ENST00000366747 ZSCAN20P17040 1043 aaPredicted RBP16.31■□□□□ 0.2
MRPL55-218ENST00000366747 POU3F3P20264 500 aaPredicted RBP16.31■□□□□ 0.2
MRPL55-218ENST00000366747 ERVK-21P61565 698 aa16.31■□□□□ 0.2
MRPL55-218ENST00000366747 POU5F1BQ06416 359 aa16.31■□□□□ 0.2
MRPL55-218ENST00000366747 DRP2Q13474 957 aa16.31■□□□□ 0.2
MRPL55-218ENST00000366747 NBR1Q14596 966 aa16.31■□□□□ 0.2
MRPL55-218ENST00000366747 SRGAP1Q7Z6B7 1085 aa16.31■□□□□ 0.2
MRPL55-218ENST00000366747 RHPN2Q8IUC4 686 aa16.31■□□□□ 0.2
MRPL55-218ENST00000366747 CRIPAKQ8N1N5 446 aa16.31■□□□□ 0.2
MRPL55-218ENST00000366747 MCPH1Q8NEM0 835 aa16.31■□□□□ 0.2
MRPL55-218ENST00000366747 MYLIPQ8WY64 445 aa16.31■□□□□ 0.2
MRPL55-218ENST00000366747 SH2D3AQ9BRG2 576 aa16.31■□□□□ 0.2
MRPL55-218ENST00000366747 PRDM12Q9H4Q4 367 aa16.31■□□□□ 0.2
MRPL55-218ENST00000366747 RC3H2Q9HBD1 1191 aaKnown RBP16.31■□□□□ 0.2
MRPL55-218ENST00000366747 CHST12Q9NRB3 414 aa16.31■□□□□ 0.2
MRPL55-218ENST00000366747 DACT1Q9NYF0 836 aa16.31■□□□□ 0.2
MRPL55-218ENST00000366747 DAXXQ9UER7 740 aaPredicted RBP16.31■□□□□ 0.2
MRPL55-218ENST00000366747 ADGRA3Q8IWK6 1321 aa16.3■□□□□ 0.2
MRPL55-218ENST00000366747 LCHNA4D1U4 455 aa16.3■□□□□ 0.2
MRPL55-218ENST00000366747 LINC01553A4QN01 128 aa16.3■□□□□ 0.2
MRPL55-218ENST00000366747 VPS37CA5D8V6 355 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-218ENST00000366747 SLC26A4O43511 780 aa16.3■□□□□ 0.2
MRPL55-218ENST00000366747 MED24O75448 989 aa16.3■□□□□ 0.2
MRPL55-218ENST00000366747 DGKIO75912 1065 aa16.3■□□□□ 0.2
MRPL55-218ENST00000366747 UPP2O95045 317 aa16.3■□□□□ 0.2
MRPL55-218ENST00000366747 TFDP1Q14186 410 aa16.3■□□□□ 0.2
MRPL55-218ENST00000366747 DSC3Q14574 896 aa16.3■□□□□ 0.2
MRPL55-218ENST00000366747 KRT79Q5XKE5 535 aa16.3■□□□□ 0.2
MRPL55-218ENST00000366747 FAM117BQ6P1L5 589 aa16.3■□□□□ 0.2
MRPL55-218ENST00000366747 TMCO2Q7Z6W1 182 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-218ENST00000366747 RTN4RL1Q86UN2 441 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-218ENST00000366747 CMTR2Q8IYT2 770 aaKnown RBP16.3■□□□□ 0.2
MRPL55-218ENST00000366747 ZNF689Q96CS4 500 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-218ENST00000366747 PPP1R16BQ96T49 567 aa16.3■□□□□ 0.2
MRPL55-218ENST00000366747 ADAM2Q99965 735 aa16.3■□□□□ 0.2
MRPL55-218ENST00000366747 TRAIPQ9BWF2 469 aa16.3■□□□□ 0.2
MRPL55-218ENST00000366747 LMCD1Q9NZU5 365 aa16.3■□□□□ 0.2
MRPL55-218ENST00000366747 LRFN2Q9ULH4 789 aa16.3■□□□□ 0.2
MRPL55-218ENST00000366747 A0A087WZ62 844 aa16.29■□□□□ 0.2
MRPL55-218ENST00000366747 C9IYK1 514 aa16.29■□□□□ 0.2
MRPL55-218ENST00000366747 HOXA2O43364 376 aa16.29■□□□□ 0.2
MRPL55-218ENST00000366747 GTPBP6O43824 516 aaPredicted RBP16.29■□□□□ 0.2
MRPL55-218ENST00000366747 SYT1P21579 422 aa16.29■□□□□ 0.2
MRPL55-218ENST00000366747 CCT6AP40227 531 aaKnown RBP16.29■□□□□ 0.2
MRPL55-218ENST00000366747 FAM189BP81408 668 aa16.29■□□□□ 0.2
MRPL55-218ENST00000366747 FERMT3Q86UX7 667 aa16.29■□□□□ 0.2
MRPL55-218ENST00000366747 FIBCD1Q8N539 461 aa16.29■□□□□ 0.2
MRPL55-218ENST00000366747 ZNF579Q8NAF0 562 aaKnown RBP16.29■□□□□ 0.2
MRPL55-218ENST00000366747 PRPF31Q8WWY3 499 aaKnown RBP16.29■□□□□ 0.2
MRPL55-218ENST00000366747 AK8Q96MA6 479 aa16.29■□□□□ 0.2
MRPL55-218ENST00000366747 NLRP4Q96MN2 994 aa16.29■□□□□ 0.2
MRPL55-218ENST00000366747 FDXACB1Q9BRP7 624 aaPredicted RBP16.29■□□□□ 0.2
MRPL55-218ENST00000366747 NFKBIZQ9BYH8 718 aa16.29■□□□□ 0.2
MRPL55-218ENST00000366747 XPNPEP1Q9NQW7 623 aa16.29■□□□□ 0.2
MRPL55-218ENST00000366747 TMEM161AQ9NX61 479 aa16.29■□□□□ 0.2
MRPL55-218ENST00000366747 PCDHB7Q9Y5E2 793 aa16.29■□□□□ 0.2
MRPL55-218ENST00000366747 PTPRSQ13332 1948 aa16.28■□□□□ 0.2
MRPL55-218ENST00000366747 SKIP12755 728 aa16.28■□□□□ 0.2
MRPL55-218ENST00000366747 PHKA2P46019 1235 aa16.28■□□□□ 0.2
MRPL55-218ENST00000366747 LAMTOR4Q0VGL1 99 aa16.28■□□□□ 0.2
MRPL55-218ENST00000366747 IFNLR1Q8IU57 520 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-218ENST00000366747 MAFAQ8NHW3 353 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-218ENST00000366747 SNX29Q8TEQ0 813 aa16.28■□□□□ 0.2
MRPL55-218ENST00000366747 PIGOQ8TEQ8 1089 aa16.28■□□□□ 0.2
MRPL55-218ENST00000366747 ARNTL2Q8WYA1 636 aa16.28■□□□□ 0.2
MRPL55-218ENST00000366747 TMEM143Q96AN5 459 aa16.28■□□□□ 0.2
MRPL55-218ENST00000366747 NT5C3AQ9H0P0 336 aa16.28■□□□□ 0.2
MRPL55-218ENST00000366747 ZSCAN16Q9H4T2 348 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-218ENST00000366747 IFT122Q9HBG6 1241 aa16.28■□□□□ 0.2
MRPL55-218ENST00000366747 TTC3P53804 2025 aa16.28■□□□□ 0.2
MRPL55-218ENST00000366747 EVPLQ92817 2033 aa16.28■□□□□ 0.2
MRPL55-218ENST00000366747 GBF1Q92538 1859 aa16.27■□□□□ 0.2
MRPL55-218ENST00000366747 ARHGEF35A5YM69 484 aa16.27■□□□□ 0.2
MRPL55-218ENST00000366747 ZBTB39O15060 712 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms