RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 TSPYL1Q9H0U9 437 aa19.03■□□□□ 0.64
TRIM11-202ENST00000366699 PACSIN2Q9UNF0 486 aaPredicted RBP19.03■□□□□ 0.64
TRIM11-202ENST00000366699 JAM2P57087 298 aa19.03■□□□□ 0.64
TRIM11-202ENST00000366699 TNNC1P63316 161 aa19.03■□□□□ 0.64
TRIM11-202ENST00000366699 CXCL9Q07325 125 aa19.03■□□□□ 0.64
TRIM11-202ENST00000366699 SLC30A10Q6XR72 485 aa19.03■□□□□ 0.64
TRIM11-202ENST00000366699 DEFB132Q7Z7B7 95 aa19.03■□□□□ 0.64
TRIM11-202ENST00000366699 RBM46Q8TBY0 533 aaKnown RBP19.03■□□□□ 0.64
TRIM11-202ENST00000366699 SLC16A10Q8TF71 515 aa19.03■□□□□ 0.64
TRIM11-202ENST00000366699 PBKQ96KB5 322 aa19.03■□□□□ 0.64
TRIM11-202ENST00000366699 EPB41L5Q9HCM4 733 aa19.03■□□□□ 0.64
TRIM11-202ENST00000366699 KCNH7Q9NS40 1196 aa19.03■□□□□ 0.64
TRIM11-202ENST00000366699 UTRNP46939 3433 aa19.02■□□□□ 0.64
TRIM11-202ENST00000366699 ZBTB39O15060 712 aa19.02■□□□□ 0.64
TRIM11-202ENST00000366699 GFPT2O94808 682 aa19.02■□□□□ 0.64
TRIM11-202ENST00000366699 CCDC172P0C7W6 258 aa19.02■□□□□ 0.64
TRIM11-202ENST00000366699 ITGB5P18084 799 aa19.02■□□□□ 0.64
TRIM11-202ENST00000366699 INPP5BP32019 993 aa19.02■□□□□ 0.64
TRIM11-202ENST00000366699 STAT1P42224 750 aa19.02■□□□□ 0.64
TRIM11-202ENST00000366699 NOP2P46087 812 aaKnown RBP19.02■□□□□ 0.64
TRIM11-202ENST00000366699 GHRHRQ02643 423 aa19.02■□□□□ 0.64
TRIM11-202ENST00000366699 GUCY2DQ02846 1103 aa19.02■□□□□ 0.64
TRIM11-202ENST00000366699 NBPF9Q3BBW0 867 aa19.02■□□□□ 0.64
TRIM11-202ENST00000366699 SYCP3Q8IZU3 236 aa19.02■□□□□ 0.64
TRIM11-202ENST00000366699 USP38Q8NB14 1042 aa19.02■□□□□ 0.64
TRIM11-202ENST00000366699 JDP2Q8WYK2 163 aa19.02■□□□□ 0.64
TRIM11-202ENST00000366699 FIZ1Q96SL8 496 aa19.02■□□□□ 0.64
TRIM11-202ENST00000366699 SIX2Q9NPC8 291 aa19.02■□□□□ 0.64
TRIM11-202ENST00000366699 AGPAT3Q9NRZ7 376 aa19.02■□□□□ 0.64
TRIM11-202ENST00000366699 LARSQ9P2J5 1176 aaKnown RBP19.02■□□□□ 0.64
TRIM11-202ENST00000366699 CTDP1Q9Y5B0 961 aaPredicted RBP19.02■□□□□ 0.64
TRIM11-202ENST00000366699 ZNF536O15090 1300 aa19.02■□□□□ 0.64
TRIM11-202ENST00000366699 MYH11P35749 1972 aa19.02■□□□□ 0.63
TRIM11-202ENST00000366699 LOXHD1Q8IVV2 1947 aa19.02■□□□□ 0.63
TRIM11-202ENST00000366699 SHOX2O60902 331 aaPredicted RBP19.02■□□□□ 0.63
TRIM11-202ENST00000366699 KIF4AO95239 1232 aa19.02■□□□□ 0.63
TRIM11-202ENST00000366699 MAPTP10636 758 aaKnown RBP19.02■□□□□ 0.63
TRIM11-202ENST00000366699 PCNX4Q63HM2 1172 aa19.02■□□□□ 0.63
TRIM11-202ENST00000366699 BANK1Q8NDB2 785 aa19.02■□□□□ 0.63
TRIM11-202ENST00000366699 LMBR1Q8WVP7 490 aa19.02■□□□□ 0.63
TRIM11-202ENST00000366699 KRT12Q99456 494 aa19.02■□□□□ 0.63
TRIM11-202ENST00000366699 KIAA1683Q9H0B3 1180 aa19.02■□□□□ 0.63
TRIM11-202ENST00000366699 TMEM206Q9H813 350 aa19.02■□□□□ 0.63
TRIM11-202ENST00000366699 WRAP73Q9P2S5 460 aaPredicted RBP19.02■□□□□ 0.63
TRIM11-202ENST00000366699 INTUQ9ULD6 942 aa19.02■□□□□ 0.63
TRIM11-202ENST00000366699 SF3B2Q13435 895 aaKnown RBP19.01■□□□□ 0.63
TRIM11-202ENST00000366699 RASA3Q14644 834 aa19.01■□□□□ 0.63
TRIM11-202ENST00000366699 SLC9A9Q8IVB4 645 aa19.01■□□□□ 0.63
TRIM11-202ENST00000366699 TSEN2Q8NCE0 465 aaKnown RBP19.01■□□□□ 0.63
TRIM11-202ENST00000366699 BCAS3Q9H6U6 928 aa19.01■□□□□ 0.63
TRIM11-202ENST00000366699 TBC1D22BQ9NU19 505 aa19.01■□□□□ 0.63
TRIM11-202ENST00000366699 DMAC2Q9NW81 257 aa19.01■□□□□ 0.63
TRIM11-202ENST00000366699 TMEM51Q9NW97 253 aa19.01■□□□□ 0.63
TRIM11-202ENST00000366699 PHF20L1A8MW92 1017 aa19.01■□□□□ 0.63
TRIM11-202ENST00000366699 KCNK3O14649 394 aa19.01■□□□□ 0.63
TRIM11-202ENST00000366699 HIP1RO75146 1068 aa19.01■□□□□ 0.63
TRIM11-202ENST00000366699 PPFIA4O75335 1185 aa19.01■□□□□ 0.63
TRIM11-202ENST00000366699 FMO5P49326 533 aa19.01■□□□□ 0.63
TRIM11-202ENST00000366699 CARSP49589 748 aaKnown RBP19.01■□□□□ 0.63
TRIM11-202ENST00000366699 PADI6Q6TGC4 694 aa19.01■□□□□ 0.63
TRIM11-202ENST00000366699 LRRC57Q8N9N7 239 aa19.01■□□□□ 0.63
TRIM11-202ENST00000366699 ZFP91Q96JP5 570 aaPredicted RBP19.01■□□□□ 0.63
TRIM11-202ENST00000366699 TMEM59LQ9UK28 342 aa19.01■□□□□ 0.63
TRIM11-202ENST00000366699 DBR1Q9UK59 544 aaKnown RBP19.01■□□□□ 0.63
TRIM11-202ENST00000366699 NENFQ9UMX5 172 aa19.01■□□□□ 0.63
TRIM11-202ENST00000366699 COL4A5P29400 1685 aa19■□□□□ 0.63
TRIM11-202ENST00000366699 A0A0A6YYK5 440 aaPredicted RBP19■□□□□ 0.63
TRIM11-202ENST00000366699 DDX39AO00148 427 aaKnown RBP19■□□□□ 0.63
TRIM11-202ENST00000366699 SRLQ86TD4 932 aa19■□□□□ 0.63
TRIM11-202ENST00000366699 CLEC4DQ8WXI8 215 aa19■□□□□ 0.63
TRIM11-202ENST00000366699 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19■□□□□ 0.633e-6■■■■■ 50.8
TRIM11-202ENST00000366699 STK33Q9BYT3 514 aa19■□□□□ 0.63
TRIM11-202ENST00000366699 PIM2Q9P1W9 311 aa19■□□□□ 0.63
TRIM11-202ENST00000366699 NFU1Q9UMS0 254 aa19■□□□□ 0.63
TRIM11-202ENST00000366699 H2AFZP0C0S5 128 aa19■□□□□ 0.63
TRIM11-202ENST00000366699 POLD1P28340 1107 aa19■□□□□ 0.63
TRIM11-202ENST00000366699 CYP2J2P51589 502 aa19■□□□□ 0.63
TRIM11-202ENST00000366699 H2AFVQ71UI9 128 aa19■□□□□ 0.63
TRIM11-202ENST00000366699 MREGQ8N565 214 aa19■□□□□ 0.63
TRIM11-202ENST00000366699 ACTRT1Q8TDG2 376 aa19■□□□□ 0.63
TRIM11-202ENST00000366699 IFT81Q8WYA0 676 aa19■□□□□ 0.63
TRIM11-202ENST00000366699 CCDC43Q96MW1 224 aaKnown RBP19■□□□□ 0.63
TRIM11-202ENST00000366699 TRERF1Q96PN7 1200 aa19■□□□□ 0.63
TRIM11-202ENST00000366699 SAMM50Q9Y512 469 aa19■□□□□ 0.63
TRIM11-202ENST00000366699 UBIAD1Q9Y5Z9 338 aa19■□□□□ 0.63
TRIM11-202ENST00000366699 RBBP6Q7Z6E9 1792 aaKnown RBP18.99■□□□□ 0.63
TRIM11-202ENST00000366699 NFIBO00712 420 aa18.99■□□□□ 0.63
TRIM11-202ENST00000366699 EXOC3O60645 756 aa18.99■□□□□ 0.63
TRIM11-202ENST00000366699 CTNND1O60716 968 aaKnown RBP18.99■□□□□ 0.63
TRIM11-202ENST00000366699 ALAS1P13196 640 aa18.99■□□□□ 0.63
TRIM11-202ENST00000366699 RFX1P22670 979 aa18.99■□□□□ 0.63
TRIM11-202ENST00000366699 MTMR1Q13613 665 aa18.99■□□□□ 0.63
TRIM11-202ENST00000366699 TKFCQ3LXA3 575 aa18.99■□□□□ 0.63
TRIM11-202ENST00000366699 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.99■□□□□ 0.63
TRIM11-202ENST00000366699 EIF1ADQ8N9N8 165 aaKnown RBP18.99■□□□□ 0.63
TRIM11-202ENST00000366699 TPCN2Q8NHX9 752 aa18.99■□□□□ 0.63
TRIM11-202ENST00000366699 WHAMMQ8TF30 809 aa18.99■□□□□ 0.63
TRIM11-202ENST00000366699 TIPINQ9BVW5 301 aa18.99■□□□□ 0.63
TRIM11-202ENST00000366699 SLC38A10Q9HBR0 1119 aa18.99■□□□□ 0.63
TRIM11-202ENST00000366699 AGO4Q9HCK5 861 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms